Contig 010047:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020O24Sequence636002206 (2)emb|CDP10671.1|8e-09unnamed protein product [Coffea canephora]735010047 (3)ref|XP_009618655.1|9e-27PREDICTED: putative late blight resistance protein homolog R1B-16 [Nicotiana to
JMSF038N20Sequence637002206 (2)emb|CDP10671.1|8e-09unnamed protein product [Coffea canephora]854010047 (3)ref|XP_009618655.1|4e-32PREDICTED: putative late blight resistance protein homolog R1B-16 [Nicotiana to
JMSF039G20Sequence646014728emb|CDP10671.1|6e-14unnamed protein product [Coffea canephora]801010047 (3)gb|AEW48216.1|2e-15disease resistance protein RX3 [Solanum leptophyes x Solanum sparsipilum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF038N20+ GGACGTATTGTTTCATTAGGAAA
                      ____________________________________________________________
consensus GGACGTATTGTTTCATTAGGAAA
 
. : . : . : . : . : . :
rJMSF038N20+ CTTTGTCAGTTGTTCATAGAAACTTAGAGAATGTATCTTGGTTGGATTCTAAGCTTTGTA
                      ____________________________________________________________
consensus CTTTGTCAGTTGTTCATAGAAACTTAGAGAATGTATCTTGGTTGGATTCTAAGCTTTGTA
 
. : . : . : . : . : . :
rJMSF020O24+ AAAAATTGGGGATTGATTGTGGANTCC
rJMSF038N20+ CAAAGGATCTGTTTATAATGATTCCAAATTTAAAAAAATTGGGGATTGATTGTGGATTCC
                      ____________________________________________________________
consensus CAAAGGATCTGTTTATAATGATTCCAAATTTAAAAAAATTGGGGATTGATTGTGGATTCC
 
. : . : . : . : . : . :
rJMSF020O24+ ATGAAGACNATCTAGATTATTTTTATAATTTTGTGCACTTGAGGCAGCTTGAGAAGTTAA
rJMSF038N20+ ATGAAGACAATCTAGATTATTTTTATAATTTTGTGCACTTGAGGCAGCTTGAGAAGTTAA
                      ____________________________________________________________
consensus ATGAAGACAATCTAGATTATTTTTATAATTTTGTGCACTTGAGGCAGCTTGAGAAGTTAA
 
. : . : . : . : . : . :
rJMSF020O24+ GCATCAAAAGGTGGACAATCAAATATATTCCATCTATCGGCTTCTCATGGGAATCTAGTT
rJMSF038N20+ GCATCAAAAGGTGGACAATCAAATATATTCCATCTATCGGCTTCTCATGGGAATCTAGTT
                      ____________________________________________________________
consensus GCATCAAAAGGTGGACAATCAAATATATTCCATCTATCGGCTTCTCATGGGAATCTAGTT
 
. : . : . : . : . : . :
rJMSF020O24+ TTTTACCAAATCTTAAGAAGCTCAAATTCTTCTGGACAAAATTTGCATGGGGTGATATGA
rJMSF038N20+ TTTTACCAAATCTTAAGAAGCTCAAATTCTTCTGGACAAAATTTGCATGGGGTGATATGA
                      ____________________________________________________________
consensus TTTTACCAAATCTTAAGAAGCTCAAATTCTTCTGGACAAAATTTGCATGGGGTGATATGA
 
. : . : . : . : . : . :
rJMSF020O24+ GGCTTATTGGCATGTTGCCAAATCTAGAGGTTCTAAAACTAATACATGCTATTGATAGCA
rJMSF038N20+ GGCTTATTGGCATGTTGCCAAATCTAGAGGTTCTAAAACTAATACATGCTATTGATAGCA
rJMSF039G20+ TGCTATTGCTAGCA
                      ____________________________________________________________
consensus GGCTTATTGGCATGTTGCCAAATCTAGAGGTTCTAAAACTAATACATGCTATTGATAGCA
 
. : . : . : . : . : . :
rJMSF020O24+ AATACAGAATCTGGGAGCCATCCAAGGAAGGGCTCCGTCAATTGAAAAGATTGGTAATT-
rJMSF038N20+ AATACAGAATCTGGGAGCCATCCAAGGAAGGGCTCCGTCAATTGAAAAGATTGGTAATT-
rJMSF039G20+ AACACAGAATGTGGGAGCCATCCGAGGAAGGATTCCCTCAATTGAAAAGATTGGTAATTG
                      ____________________________________________________________
consensus AATACAGAATCTGGGAGCCATCCAAGGAAGGGCTCCGTCAATTGAAAAGATTGGTAATT-
 
. : . : . : . : . : . :
rJMSF020O24+ GAAGATACATTTTTGCAACGTTGGAGTGCCGTGGGTGAACATTTCCCTTTGCTAGAATGT
rJMSF038N20+ GAAGATACATTTTTGCAACGTTGGAGTGCCGTGGGTGAACATTTCCCTTTGCTAGAATGT
rJMSF039G20+ GAAGATACATTTTTGGAACGTTGGAATGCCATGGGTGACCATTTCCCTCTGCTAGAATGT
                      ____________________________________________________________
consensus GAAGATACATTTTTGCAACGTTGGAGTGCCGTGGGTGAACATTTCCCTTTGCTAGAATGT
 
. : . : . : . : . : . :
rJMSF020O24+ TTAGAGATACGTGAATGCAAGTATTTGCGAGAGATCCCTAGTGGTTTTGCGGATATCACC
rJMSF038N20+ TTAGAGATACGTGAATGCAAGTATTTGCGAGAGATCCCTAGTGGTTTTGCGGATATCACC
rJMSF039G20+ TTAGAGTTACGTGAATGCAAGCATTTGCAAGAAATCCCTAGTGGTTTTGCCGATATCACC
                      ____________________________________________________________
consensus TTAGAGATACGTGAATGCAAGTATTTGCGAGAGATCCCTAGTGGTTTTGCGGATATCACC
 
. : . : . : . : . : . :
rJMSF020O24+ ACACTAGCACTAATTCAGTTAAACTGGTTTTGGGATTCCGTTCTGACTTCCGCAAAGTTG
rJMSF038N20+ ACACTAGCACTAATTCAGTTAAACTGGTTTTGGGATTCCGTTCTGACTTCCGCAAAGTTG
rJMSF039G20+ ACACTAGCACTGATTCAGTTAAACCGCTGTTGGGATTCTGTTCTGGTTTCTGCAAAGTTG
                      ____________________________________________________________
consensus ACACTAGCACTAATTCAGTTAAACTGGTTTTGGGATTCCGTTCTGACTTCCGCAAAGTTG
 
. : . : . : . : . : . :
rJMSF020O24+ ATTCAAGAAGAGCAATACAACAACTATGGAAATGCCCTCCTTGTTCGTTC
rJMSF038N20+ ATTCAAGAAGAGCAATACAACAACTATGGAAATGCCCTCCTTGTTCGTTC
rJMSF039G20+ ATTCAAGAAAAGCAATACAACAACTATGGAAATGCCCTCCTTGTTCGTTCGGAAAGTATT
                      ____________________________________________________________
consensus ATTCAAGAAGAGCAATACAACAACTATGGAAATGCCCTCCTTGTTCGTTCGGAAAGTATT
 
. : . : . : . : . : . :
rJMSF039G20+ ATGGTCTCTTTCTATCCCTCAGCTCTAATATATATATTATAATGCGTTACCATTTAACAT
                      ____________________________________________________________
consensus ATGGTCTCTTTCTATCCCTCAGCTCTAATATATATATTATAATGCGTTACCATTTAACAT
 
. : . : . : . : . : . :
rJMSF039G20+ ATATGCACTTACTTCATGCATGCTACTTGAATTCTTCATGGCCATTATATCTGATCTGAT
                      ____________________________________________________________
consensus ATATGCACTTACTTCATGCATGCTACTTGAATTCTTCATGGCCATTATATCTGATCTGAT
 
. : . : . : . : . : . :
rJMSF039G20+ CTGTTTCCTCCCATCACTTCTATCTCATATTTCCTTACCTATCTAACTGCTGTGTGTTCA
                      ____________________________________________________________
consensus CTGTTTCCTCCCATCACTTCTATCTCATATTTCCTTACCTATCTAACTGCTGTGTGTTCA
 
. : . : . : . : . : . :
rJMSF039G20+ CCTTTTCATTTTTACTTAATTTATCGATTGCAGACGGAACGTGCAAACAACAAATAGGAA
                      ____________________________________________________________
consensus CCTTTTCATTTTTACTTAATTTATCGATTGCAGACGGAACGTGCAAACAACAAATAGGAA
 
. : . : . : . : . : . :
rJMSF039G20+ GAATGGGATATGGAGGAAGAGAGTGATCTTTAGCAGTATTTGGCAGATCGAATATTCTGT
                      ____________________________________________________________
consensus GAATGGGATATGGAGGAAGAGAGTGATCTTTAGCAGTATTTGGCAGATCGAATATTCTGT
 
. : . : . : . : . : . :
rJMSF039G20+ TGCAAATCATAGTATTATATATTTTAGTAAACTGCAATGGTTTCTGCTTGTCAGAAGAAG
                      ____________________________________________________________
consensus TGCAAATCATAGTATTATATATTTTAGTAAACTGCAATGGTTTCTGCTTGTCAGAAGAAG
 
. : . : . : . : . : . :
rJMSF039G20+ TTGCTGATGGAAAGAGCTTAGTAAACTGCTGCTTTTTATTATTTTAGTTTTCGACTGTGT
                      ____________________________________________________________
consensus TTGCTGATGGAAAGAGCTTAGTAAACTGCTGCTTTTTATTATTTTAGTTTTCGACTGTGT
 
. : . : . : . : . : . :
rJMSF039G20+ TTGCAGAAAGAGCTTAGGATCTTCTGAAAGTTGTTTGGTCTTGCTTTTTTAAAGAGTATT
                      ____________________________________________________________
consensus TTGCAGAAAGAGCTTAGGATCTTCTGAAAGTTGTTTGGTCTTGCTTTTTTAAAGAGTATT