Contig 010045:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS055E07+              CTGTCGGGTGTTTCTCCCTATTCTGNCTATGTTGTATGGATGATTATATTAAGAAAG
                      ____________________________________________________________
consensus                CTGTCGGGTGTTTCTCCCTATTCTGNCTATGTTGTATGGATGATTATATTAAGAAAG
 
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JMFS055E07+           CAATTCCAAACTCTACGGTGAGACATCATCTGTATTACAGAGTTGTGGCAAAGAGTTTCT
rJMSF038K13-                  AACTCTACGGTGAGACATCATCTGTATTACAGAGTTGTGGCAAAGAGTTTCT
                      ____________________________________________________________
consensus             CAATTCCAAACTCTACGGTGAGACATCATCTGTATTACAGAGTTGTGGCAAAGAGTTTCT
 
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JMFS055E07+           AGTTTGCACCTTTTTTTTCGGCTTCTCTGGTGGTCGGGGACCAAGCGTGCTAACATCGAT
rJMSF038K13-          AGTTTGCACCTTTTTTTTCGGCTTCTCTGGTGGTCGGGGACCAAGCGTGCTAACATCGAT
                      ____________________________________________________________
consensus             AGTTTGCACCTTTTTTTTCGGCTTCTCTGGTGGTCGGGGACCAAGCGTGCTAACATCGAT
 
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JMFS055E07+           AGTAGCTCGATGCAGCTGTGCAGAACGGATGACAGCATCGTAAGCCTTTGCAGACAGAAC
rJMSF038K13-          AGTAGCTCGATGCAGCTGTGCAGAACGGATGACAGCATCGTAAGCCTTTGCAGACAGAAC
                      ____________________________________________________________
consensus             AGTAGCTCGATGCAGCTGTGCAGAACGGATGACAGCATCGTAAGCCTTTGCAGACAGAAC
 
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JMFS055E07+           CATATCCTCATTTTGCGCCCTCGTGTACAACTCATAAGATAGCCTCGGCTTGCCATCTTC
rJMSF038K13-          CATATCCTCATTTTGCGCCCTCGTGTACAACTCATAAGATAGCCTCGGCTTGCCATCTTC
                      ____________________________________________________________
consensus             CATATCCTCATTTTGCGCCCTCGTGTACAACTCATAAGATAGCCTCGGCTTGCCATCTTC
 
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JMFS055E07+           TGCAAGTGCCACGATCATCGTTTCATAGGTAACCTCATTCGGGGCTATGTTTAGAGCTTT
rJMSF038K13-          TGCAAGTGCCACGATCATCGTTTCATAGGTAACCTCATTCGGGGCTATGTTTAGAGCTTT
                      ____________________________________________________________
consensus             TGCAAGTGCCACGATCATCGTTTCATAGGTAACCTCATTCGGGGCTATGTTTAGAGCTTT
 
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JMFS055E07+           CATGTGCTGAAACCATTCGTATGCTGCACTTCCCATCTCGTTCCTCGCACATCCACTGAT
rJMSF038K13-          CATGTGCTGAAACCATTCGTATGCTGCACTTCCCATCTCGTTCCTCGCACATCCACTGAT
                      ____________________________________________________________
consensus             CATGTGCTGAAACCATTCGTATGCTGCACTTCCCATCTCGTTCCTCGCACATCCACTGAT
 
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JMFS055E07+           AATTGCGTTGAATGTGACGACCGTTGGCTCAATCCCACGGGTTTTCATTTCCAGGAGTGT
rJMSF038K13-          AATTGCGTTGAATGTGACGACCGTTGGCTCAATCCCACGGGTTTTCATTTCCAGGAGTGT
                      ____________________________________________________________
consensus             AATTGCGTTGAATGTGACGACCGTTGGCTCAATCCCACGGGTTTTCATTTCCAGGAGTGT
 
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JMFS055E07+           AGAATTAACAGCATCGAATTTGCCTTGAGAAGTGTAAAGTGAAGCCATGATAGTATAGGC
rJMSF038K13-          AGAATTAACAGCATCGAATTTGCCTTGAGAAGTGTAAAGTGAAGCCATGATAGTATAGGC
                      ____________________________________________________________
consensus             AGAATTAACAGCATCGAATTTGCCTTGAGAAGTGTAAAGTGAAGCCATGATAGTATAGGC
 
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JMFS055E07+           GTAAAGATTTGGTTCCACGCCCAGTTTAAGCATGTGTTTCCATACCTGCAGTGCCTCGTT
rJMSF038K13-          GTAAAGATTTGGTTCCACGCCCAGTTTAAGCATGTGTTTCCATACCTGCAGTGCCTCGTT
                      ____________________________________________________________
consensus             GTAAAGATTTGGTTCCACGCCCAGTTTAAGCATGTGTTTCCATACCTGCAGTGCCTCGTT
 
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JMFS055E07+           GTATAGTTTCCCTTTCTCGAGAGCACTGAGCAACGCACCATAGGA               
rJMSF038K13-          GTATAGTTTCCCTTTCTCGAGAGCACTGAGCAACGCACCATAGGAGATGATTGTTGGCTT
                      ____________________________________________________________
consensus             GTATAGTTTCCCTTTCTCGAGAGCACTGAGCAACGCACCATAGGAGATGATTGTTGGCTT
 
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rJMSF038K13-          CTCGCCTCGTTCCACCATTCTCTTGAAGATCTCTATGGCAGCAGATGTTTCTGAAGCCTT
                      ____________________________________________________________
consensus             CTCGCCTCGTTCCACCATTCTCTTGAAGATCTCTATGGCAGCAGATGTTTCTGAAGCCTT
 
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rJMSF038K13-          GGAACAAGCAATAAGGACAGCATTCCATTCCCGGCTACCCGGTTTGAGTCCTTTCTCTTC
                      ____________________________________________________________
consensus             GGAACAAGCAATAAGGACAGCATTCCATTCCCGGCTACCCGGTTTGAGTCCTTTCTCTTC
 
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rJMSF038K13-          CATCTTTTCGAGCAGCCTAACGCCCCATCGCCATATCCCTCGTTTTCTAGCTGCCCCGAG
                      ____________________________________________________________
consensus             CATCTTTTCGAGCAGCCTAACGCCCCATCGCCATATCCCTCGTTTTCTAGCTGCCCCGAG
 
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rJMSF038K13-          TAGAACGTTGAAATGAGAAACTATCAGTTCATAAGACATGTTATTCGGTTTTGGCCCGTT
                      ____________________________________________________________
consensus             TAGAACGTTGAAATGAGAAACTATCAGTTCATAAGACATGTTATTCGGTTTTGGCCCGTT
 
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rJMSF038K13-          TTCCAACAGATCTTCGTATATTTCGAGAGCTGCCCACCATTTCTTAGCCTTCCCCATTAG
                      ____________________________________________________________
consensus             TTCCAACAGATCTTCGTATATTTCGAGAGCTGCCCACCATTTCTTAGCCTTCCCCATTAG
 
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rJMSF038K13-          CCAAATCACATGGTTACAGACAGATAGGCTAATCTCAGAGCTTCTTTCTCTTATCCTCTC
                      ____________________________________________________________
consensus             CCAAATCACATGGTTACAGACAGATAGGCTAATCTCAGAGCTTCTTTCTCTTATCCTCTC