Contig 010044:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF038I04+                                                                 GTTAT
                      ____________________________________________________________
consensus                                                                    GTTAT
 
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rJMSF038I04+          TTCAANGTTTGTGGATCATTTTAATGAGAAGCAATTGAATTTTATGGCCTCATGGGATAT
                      ____________________________________________________________
consensus             TTCAANGTTTGTGGATCATTTTAATGAGAAGCAATTGAATTTTATGGCCTCATGGGATAT
 
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rJMSF038I04+          TTCTGTACTACCAGATGTTTCTGTTGAACTTGTAGTCAACCTGATTGAATTCATAATTTT
                      ____________________________________________________________
consensus             TTCTGTACTACCAGATGTTTCTGTTGAACTTGTAGTCAACCTGATTGAATTCATAATTTT
 
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rJMSF038I04+          TATGTAGGTTTAGATATTGTCTGATGTCTCTCTGGGAAGTCTTCCTGAACTGCCATTCTT
                      ____________________________________________________________
consensus             TATGTAGGTTTAGATATTGTCTGATGTCTCTCTGGGAAGTCTTCCTGAACTGCCATTCTT
 
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rJMSF038I04+          GTGTATTTTGATTATTTGTGTCATTTTAGATGGCAAAAAGCCTGCTGCTGCTGCTGCGAT
                      ____________________________________________________________
consensus             GTGTATTTTGATTATTTGTGTCATTTTAGATGGCAAAAAGCCTGCTGCTGCTGCTGCGAT
 
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rJMSF038I04+          ACAAGGAGGAGGTGGCTTAGAATTGGCATTGGTTTGTTGTTTATATGCTCCAATAAGTCT
                      ____________________________________________________________
consensus             ACAAGGAGGAGGTGGCTTAGAATTGGCATTGGTTTGTTGTTTATATGCTCCAATAAGTCT
 
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rJMSF038I04+          TTCATACTTGAGTAATATATTAATATTTGACTGTGTATACCAGCATAAGTATGTTTTGAT
                      ____________________________________________________________
consensus             TTCATACTTGAGTAATATATTAATATTTGACTGTGTATACCAGCATAAGTATGTTTTGAT
 
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rJMSF038I04+          TTGTTGAAATATTCAAGTTCATCTTGATATATTTTTAAACTAGTGGCTTGAGTGTTTGAT
                      ____________________________________________________________
consensus             TTGTTGAAATATTCAAGTTCATCTTGATATATTTTTAAACTAGTGGCTTGAGTGTTTGAT
 
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rJMSF018C14+                                                               TGTGGGA
rJMSF038I04+          ATCCTTTTCAAGGTACACAACGTCTTCCAAGGCTTGTGGGATTGCGGAAGACTTGTGGGA
                      ____________________________________________________________
consensus             ATCCTTTTCAAGGTACACAACGTCTTCCAAGGCTTGTGGGATTGCGGAAGACTTGTGGGA
 
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rJMSF018C14+          TTGCAGAAAGGTGTTGAAATGATGCTGACATCTAAACCCATATTGTCTGAAGGGAAGAAC
rJMSF038I04+          TTGCAGAAAGGTGTTGAAATGATGCTGACATCTAAACCCATATTGTCTGAAGGGAAGAAC
                      ____________________________________________________________
consensus             TTGCAGAAAGGTGTTGAAATGATGCTGACATCTAAACCCATATTGTCTGAAGGGAAGAAC
 
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rJMSF018C14+          TTAGGTCTTATTGATGCAATTGTGTCCCCAGCAGAATTGATTAAAGTGTGACGGCAGTGG
rJMSF038I04+          TTAGGTCTTATTGATGCAATTGTGTCCCCAGCAGAATTGATTAAAGTGTGACGGCAGTGG
                      ____________________________________________________________
consensus             TTAGGTCTTATTGATGCAATTGTGTCCCCAGCAGAATTGATTAAAGTGTGACGGCAGTGG
 
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rJMSF018C14+          GCACTGGATATTGCAGAAAGGCACAAACCTTGGATGCGATCCCTTCNTACTTCATAGGAC
rJMSF038I04+          GCACTGGATATTGCAGAAAGGCACAAACCTTGGATGCGATCCCTTCATACTTCATAGGAC
                      ____________________________________________________________
consensus             GCACTGGATATTGCAGAAAGGCACAAACCTTGGATGCGATCCCTTCATACTTCATAGGAC
 
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rJMSF018C14+          TGNCAAACTATGCTCCCTTTCAGAAGCACCGGATATTCTGAANCTTGCTAGACAACAAGA
rJMSF038I04+          TGACAAACTATGCTCCCTTTCAGAAGCACCGGATATTCTGAAGCTTGCTAGACAACAAGA
                      ____________________________________________________________
consensus             TGACAAACTATGCTCCCTTTCAGAAGCACCGGATATTCTGAAGCTTGCTAGACAACAAGA
 
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rJMSF018C14+          AAAGCAGACTGCTCCCAATATGCCTCAACACCTGGGTTTGCCTTGATGTGANTGAAGAAG
rJMSF038I04+          AAAGCAGACTGCTCCCAATATGCCTCAACACCTGGGTTTGCCTTGATGTGATTGAAGAAG
                      ____________________________________________________________
consensus             AAAGCAGACTGCTCCCAATATGCCTCAACACCTGGGTTTGCCTTGATGTGATTGAAGAAG
 
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rJMSF018C14+          GCAGTGTTCATGGAGGATACATTCCCTATGGGTCCATTCCAGTAATTTCTTTCCTTCATA
rJMSF038I04+          GCAGTGTTCATGGAGGATACATTCCCTATGGGTCCATTCCAGTAATTTCTTTCCTTCATA
                      ____________________________________________________________
consensus             GCAGTGTTCATGGAGGATACATTCCCTATGGGTCCATTCCAGTAATTTCTTTCCTTCATA
 
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rJMSF018C14+          TACACAGCTCNTTAATCGAAATTCATATGAGCATTTTCTGAAACAGAAAACATTT     
rJMSF038I04+          TACACAGCTCATTAATCGAAATTCATATGAGCATTTTCTGAAACAGAAAACATTTGTGTT
                      ____________________________________________________________
consensus             TACACAGCTCATTAATCGAAATTCATATGAGCATTTTCTGAAACAGAAAACATTTGTGTT