Contig 010043:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF038F11+                                                                CCGAGG
                      ____________________________________________________________
consensus                                                                   CCGAGG
 
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rJMSF038F11+          TGGATAAGTTGNTGTTAGAAATGGAAGAGAAGGGCGTCCCGAGAGACGTGGAGACCTTCA
                      ____________________________________________________________
consensus             TGGATAAGTTGNTGTTAGAAATGGAAGAGAAGGGCGTCCCGAGAGACGTGGAGACCTTCA
 
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rJMFF011J11+                           TTGTGTAAGATTAGACAAACTCAGACCGCGATTGACTTATTCT
rJMSF038F11+          ANGTGTTGGTTTCTAATTTGTGTAAGATTAGACAAACTCAGACCGCGATTGACTTATTCT
                      ____________________________________________________________
consensus             ANGTGTTGGTTTCTAATTTGTGTAAGATTAGACAAACTCAGACCGCGATTGACTTATTCT
 
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rJMFF011J11+          ATCGGATGGGGGAATGGGGATGTCATCCCAACGAGACAACGTTTCTCACGCTTATTAGGA
rJMSF038F11+          ATCGGATGGGGGAATGGGGATGTCATCCCAACGAGACAACGTTTCTCACGCTTATTAGGA
                      ____________________________________________________________
consensus             ATCGGATGGGGGAATGGGGATGTCATCCCAACGAGACAACGTTTCTCACGCTTATTAGGA
 
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rJMFF011J11+          GTTTGTATCAGGCCGCGAGAGTTGGAGAGGGCGACGAAATGATTGATAGGATGAAGTCTG
rJMSF038F11+          GTTTGTATCAGGCCGCGAGAGTTGGAGAGGGCGACGAAATGATTGATAGGATGAAGTCTG
                      ____________________________________________________________
consensus             GTTTGTATCAGGCCGCGAGAGTTGGAGAGGGCGACGAAATGATTGATAGGATGAAGTCTG
 
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rJMFF011J11+          CGGGATATGGAGATGCGCTCGATAAGAAGGCGTATTATGGATTTCTTAAAATACTATGTG
rJMSF038F11+          CGGGATATGGNGATGCGCTCGATAAGAAGGCGTATTATGGATTTCTTAAAATACTATGTG
                      ____________________________________________________________
consensus             CGGGATATGGAGATGCGCTCGATAAGAAGGCGTATTATGGATTTCTTAAAATACTATGTG
 
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rJMFF011J11+          GGATCGAGAGGATCGATCACGCCATGAATGTTTTCACGAAGATGAAAGAAGATGGTTGCA
rJMSF038F11+          GGATCGAGAGGATCGATCACGCCATGAATGTTTTCACGAAGATGAAAGAAGATGGTTGCA
                      ____________________________________________________________
consensus             GGATCGAGAGGATCGATCACGCCATGAATGTTTTCACGAAGATGAAAGAAGATGGTTGCA
 
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rJMFF011J11+          AACCGGGAATTAAGACGTATGAGTTATTGATGGGAAGGTTGGTTGCTCATGGCCGGATGG
rJMSF038F11+          AACCGGGAATTAAGACGTATGAGTTATTGATGGGAAGGTTGGTTGCTCATGGCCGGATGG
                      ____________________________________________________________
consensus             AACCGGGAATTAAGACGTATGAGTTATTGATGGGAAGGTTGGTTGCTCATGGCCGGATGG
 
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rJMFF011J11+          ATAAGGCAAATGCTCTTTATAAAGAAGCCGAGAGCGATGGGATTCAAGTTGAGCCAAAGG
rJMSF038F11+          ATAAGGCAAATGCTCTTTATAAAGAAGCCGAGAGCGATGGGATTCAAGTTGAGCCAAAGG
                      ____________________________________________________________
consensus             ATAAGGCAAATGCTCTTTATAAAGAAGCCGAGAGCGATGGGATTCAAGTTGAGCCAAAGG
 
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rJMFF011J11+          CATATAAGGTGGATCCTAGATTTGCAAAGAAGAAGTCTTCTACTTGCGTGAAGAAGGAGA
rJMSF038F11+          CATATAAGGTGGATCCTAGATTTGCAAAGAAGAAGTCTTCTACTTGCGTGAAGAAGGAGA
                      ____________________________________________________________
consensus             CATATAAGGTGGATCCTAGATTTGCAAAGAAGAAGTCTTCTACTTGCGTGAAGAAGGAGA
 
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rJMFF011J11+          AGAAGCGAGAGACATTGCCCGAGAAAATGGCTAGGAAGAGGAGAACTCTCAAGAAAATCC
rJMSF038F11+          AGAAGCGAGAGACATTGCCCGAGAAAATGGCTAGGAAGAGGAGAACTCTCAAGAAAATCC
                      ____________________________________________________________
consensus             AGAAGCGAGAGACATTGCCCGAGAAAATGGCTAGGAAGAGGAGAACTCTCAAGAAAATCC
 
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rJMFF011J11+          GGCTTAGTTATGTGAAGAAGCCCAGAGGAACACGTCGAGCCCTTTGATCAAAATCGCATT
rJMSF038F11+          GGCTTAGTTATGTGAAGAAGCCCAGAGGAACACGTCGAGCCCTTTGATCAAAATCGCATT
                      ____________________________________________________________
consensus             GGCTTAGTTATGTGAAGAAGCCCAGAGGAACACGTCGAGCCCTTTGATCAAAATCGCATT
 
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rJMFF011J11+          TGATGTTGTCAAGAAAAACTCCATGAAAGGTTAAACTTCACTATAGAGTAATTCTTTCAC
rJMSF038F11+          TGATGTTGTCAAGAAAAACTCCATGAAAGGTTAAACTTCACTATAGAGTAATTCTTTCAC
                      ____________________________________________________________
consensus             TGATGTTGTCAAGAAAAACTCCATGAAAGGTTAAACTTCACTATAGAGTAATTCTTTCAC
 
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rJMFF011J11+          TTGATTTTACTGGTGGCTTCTTGTTTTTAGATCAGTTTTGCAACATTAGA          
rJMSF038F11+          TTGATTTTACTGGTGGCTTCTTGTTTTTAGATCAGTTTTGCAACATTAGAAATAAATTTT
                      ____________________________________________________________
consensus             TTGATTTTACTGGTGGCTTCTTGTTTTTAGATCAGTTTTGCAACATTAGAAATAAATTTT
 
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rJMSF038F11+          CAGTTCAAACTTCAATGCTCCGACTCTGCTATACATGAGATTTTAGCTGTTAAGTGTTTG
                      ____________________________________________________________
consensus             CAGTTCAAACTTCAATGCTCCGACTCTGCTATACATGAGATTTTAGCTGTTAAGTGTTTG
 
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rJMSF038F11+          GTTTTGTTCATTTTAGAGTGTCAATCAACATCAGAGCTTGGTATATGACTCCAAGCATTC
                      ____________________________________________________________
consensus             GTTTTGTTCATTTTAGAGTGTCAATCAACATCAGAGCTTGGTATATGACTCCAAGCATTC