| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF030A09 | Sequence | 676 | 010042 (8) | ref|XP_011084789.1| | 4e-107 | PREDICTED: ABC transporter I family member 6, chloroplastic [Sesamum indicum] | 665 | 010042 (8) | ref|XP_009621684.1| | 6e-43 | PREDICTED: ABC transporter I family member 6, chloroplastic [Nicotiana tomentos |
| JMSF038E01 | Sequence | 676 | 010042 (8) | ref|XP_011084789.1| | 3e-110 | PREDICTED: ABC transporter I family member 6, chloroplastic [Sesamum indicum] | 891 | 010042 (8) | ref|XP_009791940.1| | 4e-97 | PREDICTED: ABC transporter I family member 6, chloroplastic-like [Nicotiana syl |
| JMSF046L14 | Sequence | 722 | 010042 (8) | ref|XP_011084789.1| | 6e-121 | PREDICTED: ABC transporter I family member 6, chloroplastic [Sesamum indicum] | 716 | 010042 (8) | ref|XP_009621684.1| | 6e-56 | PREDICTED: ABC transporter I family member 6, chloroplastic [Nicotiana tomentos |
| JMSF049B24 | Sequence | 662 | 010042 (8) | ref|XP_011084789.1| | 3e-107 | PREDICTED: ABC transporter I family member 6, chloroplastic [Sesamum indicum] | 730 | 010042 (8) | ref|XP_009621684.1| | 6e-67 | PREDICTED: ABC transporter I family member 6, chloroplastic [Nicotiana tomentos |
This contig is upended
. : . : . : . : . : . :
JMSF030A09- GGTCGCCGATCCG
____________________________________________________________
consensus GGTCGCCGATCCG
. : . : . : . : . : . :
JMSF030A09- GTAGGTAATTCGGTTTTCCACTTCGCCATGGCTCTCGTTACTCACCAGCTTTCTTCTCTC
JMSF038E01- AGGTAATTCGGTTTTCCACTTCGCCATGGCTCTCGTTACTCACCAGCTTTCTTCTCTC
JMSF049B24- AGGTAATTCGGTTTTCCACTTCGCCATGGCTCTCGTTACTCACCAGCTTTCTTCTCTC
JMSF046L14- AGGTAATTCGGTTTTCCACTTCGCCATGGCTCTCGTTACTCACCAGCTTTCTTCTCTC
____________________________________________________________
consensus GTAGGTAATTCGGTTTTCCACTTCGCCATGGCTCTCGTTACTCACCAGCTTTCTTCTCTC
. : . : . : . : . : . :
JMSF030A09- AAATTCTCCACCTCACATTCGCGGTTATTTACCGTATCTGCTATCCGTCCTCAACGCTGT
JMSF038E01- AAATTCTCCACCTCACATTCGCGGTTATTTACCGTATCTGCTATCCGTCCTCAACGCTGT
JMSF049B24- AAATTCTCCACCTCACATTCGCGGTTATTTACCGTATCTGCTATCCGTCCTCAACGCTGT
JMSF046L14- AAATTCTCCACCTCACATTCGCGGTTATTTACCGTATCTGCTATCCGTCCTCAACGCTGT
____________________________________________________________
consensus AAATTCTCCACCTCACATTCGCGGTTATTTACCGTATCTGCTATCCGTCCTCAACGCTGT
. : . : . : . : . : . :
JMSF030A09- CGTTTACCCCCAGCTCGCCGGCGCTTCCTGGTAGTTAAATCCACCGTCGCCGTCGAATCT
JMSF038E01- CGTTTACCCCCAGCTCGCCGGCGCTTCCTGGTAGTTAAATCCACCGTCGCCGTCGAATCT
JMSF049B24- CGTTTACCCCCAGCTCGCCGGCGCTTCCTGGTAGTTAAATCCACCGTCGCCGTCGAATCT
JMSF046L14- CGTTTACCCCCAGCTCGCCGGCGCTTCCTGGTAGTTAAATCCACCGTCGCCGTCGAATCT
____________________________________________________________
consensus CGTTTACCCCCAGCTCGCCGGCGCTTCCTGGTAGTTAAATCCACCGTCGCCGTCGAATCT
. : . : . : . : . : . :
JMSF030A09- CCTGCGTATTCCTCCGCCGACCGCGACGATGGCTACTCGAATCTGTTGCTCGAAGTCAAA
JMSF038E01- CCTGCGTATTCCTCCGCCGACCGCGACGATGGCTACTCGAATCTGTTGCTCGAAGTCAAA
JMSF049B24- CCTGCGTATTCCTCCGCCGACCGCGACGATGGCTACTCGAATCTGTTGCTCGAAGTCAAA
JMSF046L14- CCTGCGTATTCCTCCGCCGACCGCGACGATGGCTACTCGAATCTGTTGCTCGAAGTCAAA
____________________________________________________________
consensus CCTGCGTATTCCTCCGCCGACCGCGACGATGGCTACTCGAATCTGTTGCTCGAAGTCAAA
. : . : . : . : . : . :
JMSF030A09- GACCTCTCCGCCGTCATCTCCGAGTCTAAACAGCCGATTCTCAAAGGGGTTAACCTCACG
JMSF038E01- GACCTCTCCGCCGTCATCTCCGAGTCTAAACAGCCGATTCTCAAAGGGGTTAACCTCACG
JMSF049B24- GACCTCTCCGCCGTCATCTCCGAGTCTAAACAGCCGATTCTCAAAGGGGTTAACCTCACG
JMSF046L14- GACCTCTCCGCCGTCATCTCCGAGTCTAAACAGCCGATTCTCAAAGGGGTTAACCTCACG
____________________________________________________________
consensus GACCTCTCCGCCGTCATCTCCGAGTCTAAACAGCCGATTCTCAAAGGGGTTAACCTCACG
. : . : . : . : . : . :
JMSF030A09- GTTCGCGAGGGAGAGGTACATGCTGTAATGGGGAAGAATGGTTCTGGAAAGAGCACATTT
JMSF038E01- GTTCGCGAGGGAGAGGTACATGCTGTAATGGGGAAGAATGGTTCTGGAAAGAGCACATTT
JMSF049B24- GTTCGCGAGGGAGAGGTACATGCTGTAATGGGGAAGAATGGTTCTGGAAAGAGCACATTT
JMSF046L14- GTTCGCGAGGGAGAGGTACATGCTGTAATGGGGAAGAATGGTTCTGGAAAGAGCACATTT
____________________________________________________________
consensus GTTCGCGAGGGAGAGGTACATGCTGTAATGGGGAAGAATGGTTCTGGAAAGAGCACATTT
. : . : . : . : . : . :
JMSF030A09- GCAAAGGTCCTCGTTGGGCATCCCGATTATGAAATTACAGGAGGCAGTGTGACATTTAAA
JMSF038E01- GCAAAGGTCCTCGTTGGGCATCCCGATTATGAAATTACAGGAGGCAGTGTGACATTTAAA
JMSF049B24- GCAAAGGTCCTCGTTGGGCATCCCGATTATGAAATTACAGGAGGCAGTGTGACATTTAAA
JMSF046L14- GCAAAGGTCCTCGTTGGGCATCCCGATTATGAAATTACAGGAGGCAGTGTGACATTTAAA
____________________________________________________________
consensus GCAAAGGTCCTCGTTGGGCATCCCGATTATGAAATTACAGGAGGCAGTGTGACATTTAAA
. : . : . : . : . : . :
JMSF030A09- GGCGAGAATTTGCTTGAGATGGAACCGGAGGAAAGGTCTCTCGCTGGGCTTTTCTTGAGC
JMSF038E01- GGCGAGAATTTGCTTGAGATGGAACCGGAGGAAAGGTCTCTCGCTGGGCTTTTCTTGAGC
JMSF049B24- GGCGAGAATTTGCTTGAGATGGAACCGGAGGAAAGGTCTCTCGCTGGGCTTTTCTTGAGC
JMSF046L14- GGCGAGAATTTGCTTGAGATGGAACCGGAGGAAAGGTCTCTCGCTGGGCTTTTCTTGAGC
____________________________________________________________
consensus GGCGAGAATTTGCTTGAGATGGAACCGGAGGAAAGGTCTCTCGCTGGGCTTTTCTTGAGC
. : . : . : . : . : . :
JMSF030A09- TTCCAGTCCCCAGTTGAGATTCCTGGTGTGAGCAATATTGATTTCCTGAACATGGCATAT
JMSF038E01- TTCCAGTCCCCAGTTGAGATTCCTGGTGTGAGCAATATTGATTTCCTGAACATGGCATAT
JMSF049B24- TTCCAGTCCCCAGTTGAGATTCCTGGTGTGAGCAATATTGATTTCCTGAACATGGCATAT
JMSF046L14- TTCCAGTCCCCAGTTGAGATTCCTGGTGTGAGCAATATTGATTTCCTGAACATGGCATAT
rJMSF038E01+ CCCCAGTTGAGATTCCTGGTGTGAGCAATATTGATTTCCTGAACATGGCATAT
____________________________________________________________
consensus TTCCAGTCCCCAGTTGAGATTCCTGGTGTGAGCAATATTGATTTCCTGAACATGGCATAT
. : . : . : . : . : . :
JMSF030A09- AATGCTAAGAGAAGGAAACTTGGACAGCCAGAACTTGGACCAATTGAGTTTTATGGATAC
JMSF038E01- AATGCTAAGAGAAGGAAACTTGGACAGCCAGAACTTGGACCAATTGAGTTTTATGGATAC
JMSF049B24- AATGCTAAGAGAAGGAAACTTGGACAGCCAGAACTTGGACCAATTGAGTTTTATGGATAC
JMSF046L14- AATGCTAAGAGAAGGAAACTTGGACAGCCAGAACTTGGACCAATTGAGTTTTATGGATAC
rJMSF038E01+ AATGCTAAGAGAAGGAAACTTGGACAGCCAGAACTTGGACCAATTGAGTTTTATGGATAC
____________________________________________________________
consensus AATGCTAAGAGAAGGAAACTTGGACAGCCAGAACTTGGACCAATTGAGTTTTATGGATAC
. : . : . : . : . : . :
JMSF030A09- ATCGCCCCAAAACTTGAACTTGTGAACATGAAGGTAGACTTCTTGAACAGAAATGTGAAC
JMSF038E01- ATCGCCCCAAAACTTGAACTTGTGAACATGAAGGTAGACTTCTTGAACAGAAATGTGAAC
JMSF049B24- ATCGCCCCAAAACTTGAACTTGTGAACATGAAGGTAGACTTCTTGAACAGAAATGTGAAC
JMSF046L14- ATCGCCCCAAAACTTGAACTTGTGAACATGAAGGTAGACTTCTTGAACAGAAATGTGAAC
rJMSF049B24+ AACTTGTGAACATGAAGGTAGACTTCTTGAACAGAAATGTGAAC
rJMSF038E01+ ATCGCCCCAAAACTTGAACTTGTGAACATGAAGGTAGACTTCTTGAACAGAAATGTGAAC
____________________________________________________________
consensus ATCGCCCCAAAACTTGAACTTGTGAACATGAAGGTAGACTTCTTGAACAGAAATGTGAAC
. : . : . : . : . : . :
JMSF030A09- GAA
JMSF038E01- GAAGGGTTCAGTGGT
JMSF049B24- GAA
JMSF046L14- GAAGGGTTCAGTGGTGGAGAAAAGAAGCGAAATGAGATTTTACAACTAGCGGTCCTCGGA
rJMSF049B24+ GAAGGGTTCAGTGGTGGAGAAAAGAAGCGAAATGAGATTTTACAACTAGCGGTCCTCGGA
rJMSF030A09+ GTCCTCGGA
rJMSF046L14+ GGGTTCAGTGGTGGAGAAAAGAAGCGAAATGAGATTTTACAACTAGCGGTCCTCGGA
rJMSF038E01+ GAAGGGTTCAGTGGTGGAGAAAAGAAGCGAAATGAGATTTTACAACTAGCGGTCCTCGGA
____________________________________________________________
consensus GAAGGGTTCAGTGGTGGAGAAAAGAAGCGAAATGAGATTTTACAACTAGCGGTCCTCGGA
. : . : . : . : . : . :
rJMSF049B24+ GCTGAGTTGGCTATGTTAGATGAAATTGATTCGGGCTTAGATGTTGATGCACTTCGAGAT
rJMSF030A09+ GCTGAGTNGGCTATGTTAGATGAAATTGATTCGGGCTTAGATGTTGATGCACTTCGAGAT
rJMSF046L14+ GCTGAGTTGGCTATGTTAGATGAAATTGATTCGGGCTTAGATGTTGATGCACTTCGAGAT
rJMSF038E01+ GCTGAGTTGGCTATGTTAGATGAAATTGATTCGGGCTTAGATGTTGATGCACTTCGAGAT
____________________________________________________________
consensus GCTGAGTTGGCTATGTTAGATGAAATTGATTCGGGCTTAGATGTTGATGCACTTCGAGAT
. : . : . : . : . : . :
rJMSF049B24+ GTGGCAAAAGCAGTGAATGGGCTATTATCCCCCACAAAATCTGTTTTGATGATTACTCAT
rJMSF030A09+ GTGGCAAAAGCAGTGAATGGGCTATTATCCCCCACAAAATCTGTTTTGATGATTACTCAT
rJMSF046L14+ GTGGCAAAAGCAGTGAATGGGCTATTATCCCCCACAAAATCTGTTTTGATGATTACTCAT
rJMSF038E01+ GTGGCAAAAGCAGTGAATGGGCTATTATCCCCCACAAAATCTGTTTTGATGATTACTCAT
____________________________________________________________
consensus GTGGCAAAAGCAGTGAATGGGCTATTATCCCCCACAAAATCTGTTTTGATGATTACTCAT
. : . : . : . : . : . :
rJMSF049B24+ TATCTACGACTCTTGGAGTTTATTAAGCCAAACTTTATCCACATCATGGAGGATGGTAGA
rJMSF030A09+ TATCTACGACTCTTGGAGTTTATTAAGCCAAACTTTATCCACATCATGGAGGATGGTAGA
rJMSF046L14+ TATCTACGACTCTTGGAGTTTATTAAGCCAAACTTTATCCACATCATGGAGGATGGTAGA
rJMSF038E01+ TATCTACGACTCTTGGAGTTTATTAAGCCAAACTTTATCCACATCATGGAGGATGGTAGA
____________________________________________________________
consensus TATCTACGACTCTTGGAGTTTATTAAGCCAAACTTTATCCACATCATGGAGGATGGTAGA
. : . : . : . : . : . :
rJMSF049B24+ ATCGTGAAGACAGGGGATATATCCATAGCTAAACTTCTAGAGAAAGAAGGATACAAGGCA
rJMSF030A09+ ATCGTGAAGACAGGGGATATATCCATAGCTAAACTTCTAGAGAAAGAAGGATACAAGGCA
rJMSF046L14+ ATCGTGAAGACAGGGGATATATCCATAGCTAAACTTCTAGAGAAAGAAGGATACAAGGCA
rJMSF038E01+ ATCGTGAAGACAGGGGATATATCCATAGCTAAACTTCTAGAGAAAGAAGGATACAAGGCA
____________________________________________________________
consensus ATCGTGAAGACAGGGGATATATCCATAGCTAAACTTCTAGAGAAAGAAGGATACAAGGCA
. : . : . : . : . : . :
rJMSF049B24+ ATTTCAGGTGCATAGCAGACTATATCTAAGCTGGTGTTCACTCCCTCCATTCTGTCTTCT
rJMSF030A09+ ATTTCAGGTGCATAGCAGACTATATCTAAGCTGGTGTTCACTCCCTCCATTCTGTCTTCT
rJMSF046L14+ ATTTCAGGTGCATAGCAGACTATATCTAAGCTGGTGTTCACTCCCTCCATTCTGTCTTCT
rJMSF038E01+ ATTTCAGGTGCATAGCAGACTATATCTAAGCTGGTGTTCACTCCCTCCATTCTGTCTTCT
____________________________________________________________
consensus ATTTCAGGTGCATAGCAGACTATATCTAAGCTGGTGTTCACTCCCTCCATTCTGTCTTCT
. : . : . : . : . : . :
rJMSF049B24+ TCGTCTTTTTAGTGAACTTCACTACCTATCCGCGAAGCATAGGGTGATTCATTAATTCAT
rJMSF030A09+ TCGTCTTTTTAGTGAACTTCACTACCTATCCGCGAAGCATAGGGTGATTCATTAATTCAT
rJMSF046L14+ TCGTCTTTTTAGTGAACTTCACTACCTATCCGCGAAGCATAGGGTGATTCATTAATTCAT
rJMSF038E01+ TCGTCTTTTTAGTGAACTTCACTACCTATCCGCGAAGCATAGGGTGATTCATTAATTCAT
____________________________________________________________
consensus TCGTCTTTTTAGTGAACTTCACTACCTATCCGCGAAGCATAGGGTGATTCATTAATTCAT
. : . : . : . : . : . :
rJMSF049B24+ TGGAGGATACAAGGTATAGTTGCCTAACAATGAAGAACTTAATAATCTTGAAGAACTGGA
rJMSF030A09+ TGGAGGATACAAGGTATAGTTGCCTAACAATGAAGAACTTAATAATCTTGAAGAACTGGA
rJMSF046L14+ TGGAGGATACAAGGTATAGTTGCCTAACAATGAAGAACTTAATAATCTTGAAGAACTGGA
rJMSF038E01+ TGGAGGATACAAGGTATAGTTGCCTAACAATGAAGAACTTAATAATCTTGAAGAACTGGA
____________________________________________________________
consensus TGGAGGATACAAGGTATAGTTGCCTAACAATGAAGAACTTAATAATCTTGAAGAACTGGA
. : . : . : . : . : . :
rJMSF049B24+ ACTAAAATAACTCAGCACCATTTCAAACCTCCAACTTGGAAGAGGATCTGGGAGTTTCAA
rJMSF030A09+ ACTAAAATAACTCAGCACCATTTCAAACCTCCAACTTGGAAGAGGATCTGGGAGTTTCAA
rJMSF046L14+ ACTAAAATAACTCAGCACCATTTCAAACCTCCAACTTGGAAGAGGATCTGGGAGTTTCAA
rJMSF038E01+ ACTAAAATAACTCAGCACCATTTCAAACCTCCAACTTGGAAGAGGATCTGGGAGTTTCAA
____________________________________________________________
consensus ACTAAAATAACTCAGCACCATTTCAAACCTCCAACTTGGAAGAGGATCTGGGAGTTTCAA
. : . : . : . : . : . :
rJMSF049B24+ AGCCTGTGAGTATTGAGATGTGATGAATTTTCCTTTCTTGTTTCCAGTTTCTTGTGCAGT
rJMSF030A09+ AGCCTGTGAGTATTGAGATGTGATGAATTTTCCTTTCTTGTTTCCAGTTTCTTGTGCAGT
rJMSF046L14+ AGCCTGTGAGTATTGAGATGTGATGAATTTTCCTTTCTTGTTTCCAGTTTCTTGTGCAGT
rJMSF038E01+ AGCCTGTGAGTATTGAGATGTGATGAATTTTCCTTTCTTGTTTCCAGTTTCTTGTGCAGT
____________________________________________________________
consensus AGCCTGTGAGTATTGAGATGTGATGAATTTTCCTTTCTTGTTTCCAGTTTCTTGTGCAGT
. : . : . : . : . : . :
rJMSF049B24+ TGCCCTTGCAGGGAAAATGTCTGTTTTGTTAGTTTACTTAGTTA-CTGTAAT-CATTATC
rJMSF030A09+ TGCCCTTGCAGGGAAAATGTCTGTTTTGTTAGTTTACTTAGTTA-CTGTAAT-CATTATC
rJMSF046L14+ TGCCCTTGCAGGGAAAATGTCTGTTTTGTTAGTTTACTTAGTTANCTGTAATACATTATC
rJMSF038E01+ TGCCCTTGCAGGGAAAATGTCTGTTTTGTTAGTTTACTTAGTTA-CTGTAAT-CATTATC
____________________________________________________________
consensus TGCCCTTGCAGGGAAAATGTCTGTTTTGTTAGTTTACTTAGTTA-CTGTAAT-CATTATC
. : . : . : . : . : . :
rJMSF049B24+ TTCTTTTTTGTTCCTTTGAATTGGTAT
rJMSF030A09+ TTCTTTTTTGTTCCTTTGAATTGGTATCATGTCATGTATGTGGGGAAGTAAAACAATT
rJMSF046L14+ TTCTTTTTTGTTCCTTTGAATTGGTAT
rJMSF038E01+ TTCTTTTTTGTTCCTTTGAATTGGTATCATGTCATGTATGTGGGGAAGTAAAACAATTTT
____________________________________________________________
consensus TTCTTTTTTGTTCCTTTGAATTGGTATCATGTCATGTATGTGGGGAAGTAAAACAATTTT