Contig 010040:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003D04Sequence322006355 (2)dbj|BAN58137.1|1e-44putative GH1 familly glucosidase [Ipomoea nil]738010040 (2)dbj|BAN58137.1|6e-107putative GH1 familly glucosidase [Ipomoea nil]
JMSF037L09Sequence665006355 (2)dbj|BAN58137.1|9e-139putative GH1 familly glucosidase [Ipomoea nil]764010040 (2)dbj|BAN58137.1|2e-108putative GH1 familly glucosidase [Ipomoea nil]

Alignment

This contig is upended


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rJMSF003D04+                                                   GGATTAAATTACTATACAT
rJMSF037L09+                          GNTAATAGGATCATTTGATTTTCTTGGATTAAATTACTATACAT
                      ____________________________________________________________
consensus                             GNTAATAGGATCATTTGATTTTCTTGGATTAAATTACTATACAT
 
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rJMSF003D04+          CCTGCTATGCAACTGATACTGAATCCACCACTACAAATGGAATCCTGAGTGCTCTCACAG
rJMSF037L09+          CTTGCTATGCAACTGATACTGAATCCACCACTACAAATGGAATCCTGAGTGCTCTCACAG
                      ____________________________________________________________
consensus             CTTGCTATGCAACTGATACTGAATCCACCACTACAAATGGAATCCTGAGTGCTCTCACAG
 
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rJMSF003D04+          ATTCCCAAGTTACCACCTTAACTGAAAGGAATGGAATCCCAATTGGTCCAAGGGGGGCAT
rJMSF037L09+          ATTCCCAAGTTACCACCTTAACTGAAAGGAATGGAATCCCAATTGGTCCAAGGGGGGCAT
                      ____________________________________________________________
consensus             ATTCCCAAGTTACCACCTTAACTGAAAGGAATGGAATCCCAATTGGTCCAAGGGGGGCAT
 
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rJMSF003D04+          CTGAATGGCTATATGTCTATCCACAAGGAATTTACAAGCTATTGCATTATGTAAAAAAGA
rJMSF037L09+          CTGAATGGCTATATGTCTATCCACAAGGAATTTACAAGCTATTGCATTATGTAAAAAAGA
                      ____________________________________________________________
consensus             CTGAATGGCTATATGTCTATCCACAAGGAATTTACAAGCTATTGCATTATGTAAAAAAGA
 
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rJMSF003D04+          CATACAATATTCCACTCATCTACATCACTGAAAATGGTTATGATGAAGTAAACAATTCAA
rJMSF037L09+          CATACAATATTCCACTCATCTACATCACTGAAAATGGTTATGATGAAGTAAACAATTCAA
                      ____________________________________________________________
consensus             CATACAATATTCCACTCATCTACATCACTGAAAATGGTTATGATGAAGTAAACAATTCAA
 
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rJMSF003D04+          ATTTAACGCTTTCGGAAGCACGCCTTGATTATAACCGACTAAACTATCACCGGGAGCATA
rJMSF037L09+          ATTTAACGCTTTCGGAAGCACGCCTTGATTATAACCGACTAAACTATCACCGGGAGCATA
                      ____________________________________________________________
consensus             ATTTAACGCTTTCGGAAGCACGCCTTGATTATAACCGACTAAACTATCACCGGGAGCATA
 
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rJMSF003D04+          TTTTCTACATCTCAAAAGCAATCAATGAAGGGGTGAACGTGAAAGGTTATTTTGTTTGGT
rJMSF037L09+          TTTTCTACATCTCAAAAGCAATCAATGAAGGGGTGAACGTGAAAGGTTATTTTGTTTGGT
                      ____________________________________________________________
consensus             TTTTCTACATCTCAAAAGCAATCAATGAAGGGGTGAACGTGAAAGGTTATTTTGTTTGGT
 
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rJMSF003D04+          CGTTGATGGATAATTTTGAATGGAACGAGGGGTACACAGTTCGTTTTGGTCTAATTTTTG
rJMSF037L09+          CGTTGATGGATAATTTTGAATGGAACGAGGGGTACACAGTTCGTTTTGGTCTAATTTTTG
                      ____________________________________________________________
consensus             CGTTGATGGATAATTTTGAATGGAACGAGGGGTACACAGTTCGTTTTGGTCTAATTTTTG
 
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rJMSF003D04+          TTGATTTTAAGAATAATTTAACAAGGTATCCAAAGGAGTCTGCATTGTGGTTTGCTAA-T
rJMSF037L09+          TTGATTTTAAGAATAATTTAACAAGGTATCCAAAGGAGTCTGCATTGTGGTTTGCTAATT
                      ____________________________________________________________
consensus             TTGATTTTAAGAATAATTTAACAAGGTATCCAAAGGAGTCTGCATTGTGGTTTGCTAATT
 
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rJMSF003D04+          TTTTTGGCAAAGGAAGATGAATAGGCAACATCCCGAGAATTCATATAGTAGATTAGAAGG
rJMSF037L09+          TTTTTGGCAAAGGAAGATGAATAGGCAACATCCCGAGAATTCATATAGTAGATTAGAAGG
                      ____________________________________________________________
consensus             TTTTTGGCAAAGGAAGATGAATAGGCAACATCCCGAGAATTCATATAGTAGATTAGAAGG
 
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rJMSF003D04+          TTTACTTAAGATTTGCTTTTAGCGGTATGGTGAAAGTTTGATCCCGTCACAGATGTGGGT
rJMSF037L09+          TTTACTTAAGATTTGCTTTTAGCGGTATGGTGAAAGTTTGATCCCGTCACAGATGTGGGT
                      ____________________________________________________________
consensus             TTTACTTAAGATTTGCTTTTAGCGGTATGGTGAAAGTTTGATCCCGTCACAGATGTGGGT
 
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rJMSF003D04+          TCTTTCTGCTCATAAAAAGATCAATATGAAAAGGGTCATCCAACAACATGATTCAAAATG
rJMSF037L09+          TCTTTCTGCTCATAAAAAGATCAATATGAAAAGGGTCATCCAACAACATGATTCAAAATG
                      ____________________________________________________________
consensus             TCTTTCTGCTCATAAAAAGATCAATATGAAAAGGGTCATCCAACAACATGATTCAAAATG
 
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rJMSF003D04+          TTTATTTGTTTATTTATTTTTTAGTAAAGAACTATTAATTGTCCCGTGTAATGCACGAAC
rJMSF037L09+          TTTATTTGTTTATTTATTTTTTAGTAAAGAACTATTAATTGTCCCGTGTAATGCACGAAC
                      ____________________________________________________________
consensus             TTTATTTGTTTATTTATTTTTTAGTAAAGAACTATTAATTGTCCCGTGTAATGCACGAAC