Contig 010035:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020A08Sequence716010035 (4)gb|EYU19393.1|5e-38hypothetical protein MIMGU_mgv1a000209mg [Erythranthe guttata]744010035 (4)gb|EYU19393.1|7e-38hypothetical protein MIMGU_mgv1a000209mg [Erythranthe guttata]
JMSF036P07Sequence659010035 (4)gb|EYU19393.1|3e-38hypothetical protein MIMGU_mgv1a000209mg [Erythranthe guttata]715010035 (4)gb|EYU19393.1|5e-38hypothetical protein MIMGU_mgv1a000209mg [Erythranthe guttata]

Alignment

This contig is upended


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JMSF020A08-                                    GGGGCTGCGATTCTGGAGGCAGTTCGAACAACAAT
JMSF036P07-                                   GGGGGCTGCGATTCTGGAGGCAGTTCGAACAACAAT
                      ____________________________________________________________
consensus                                     GGGGGCTGCGATTCTGGAGGCAGTTCGAACAACAAT
 
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JMSF020A08-           CCGATTAGCTTCCGTCTCGTGCAGATTCTCTGGTCCTTCCTCCGATTAGCTTCCGTCTTC
JMSF036P07-           CCGATTAGCTTCCGTCTCGTGCAGATTCTCTGGTCCTTCCTCCGATTAGCTTCCGTCTTC
rJMSF020A08+          CCGATTAGCTTCCGTCTCGTGCAGATTCTCTGGTCCTTCCTCCGATTAGCTTCCGTCTTC
                      ____________________________________________________________
consensus             CCGATTAGCTTCCGTCTCGTGCAGATTCTCTGGTCCTTCCTCCGATTAGCTTCCGTCTTC
 
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JMSF020A08-           CGTCTTTTCTTAGGGGTTGTACCAGAAAGATTATGCACTGCGGCAGAAATAAGATTCTAC
JMSF036P07-           CGTCTTTTCTTAGGGGTTGTACCAGAAAGATTATGCACTGCGGCAGAAATAAGATTCTAC
rJMSF020A08+          CGTCTTTTCTTAGGGGTTGTACCAGAAAGATTATGCACTGCGGCAGAAATAAGATTCTAC
rJMSF036P07+               TTTCTTAGGGGTTGTACCAGAAAGATTATGCACTGCGGCAGAAATAAGATTCTAC
                      ____________________________________________________________
consensus             CGTCTTTTCTTAGGGGTTGTACCAGAAAGATTATGCACTGCGGCAGAAATAAGATTCTAC
 
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JMSF020A08-           TTCAGTAACACCTTCACAACATCAGGGAGTTCCAGTTACCTAAACCCCGGCAGAAATTGT
JMSF036P07-           TTCAGTAACACCTTCACAACATCAGGGAGTTCCAGTTACCTAAACCCCGGCAGAAATTGT
rJMSF020A08+          TTCAGTAACACCTTCACAACATCAGGGAGTTCCAGTTACCTAAACCCCGGCAGAAATTGT
rJMSF036P07+          TTCAGTAACACCTTCACAACATCAGGGAGTTCCAGTTACCTAAACCCCGGCAGAAATTGT
                      ____________________________________________________________
consensus             TTCAGTAACACCTTCACAACATCAGGGAGTTCCAGTTACCTAAACCCCGGCAGAAATTGT
 
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JMSF020A08-           AATTTTACTTCTTGGGAAGCTGGTTGTGAGCCACGATGCGCTTTTCCAGAAGTGTACCAA
JMSF036P07-           AATTTTACTTCTTGGGAAGCTGGTTGTGAGCCACGATGCGCTTTTCCAGAAGTGTACCAA
rJMSF020A08+          AATTTTACTTCTTGGGAAGCTGGTTGTGAGCCACGATGCGCTTTTCCAGAAGTGTACCAA
rJMSF036P07+          AATTTTACTTCTTGGGAAGCTGGTTGTGAGCCACGATGCGCTTTTCCAGAAGTGTACCAA
                      ____________________________________________________________
consensus             AATTTTACTTCTTGGGAAGCTGGTTGTGAGCCACGATGCGCTTTTCCAGAAGTGTACCAA
 
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JMSF020A08-           AACTGAATTGCAAAAGGATGGAAGGTAGGTTGAATCTGAGAAGAAAAGCGCTATGTATTT
JMSF036P07-           AACTGAATTGCAAAAGGATGGAAGGTAGGTTGAATCTGAGAAGAAAAGCGCTATGTATTT
rJMSF020A08+          AACTGAATTGCAAAAGGATGGAAGGTAGGTTGAATCTGAGAAGAAAAGCGCTATGTATTT
rJMSF036P07+          AACTGAATTGCAAAAGGATGGAAGGTAGGTTGAATCTGAGAAGAAAAGCGCTATGTATTT
                      ____________________________________________________________
consensus             AACTGAATTGCAAAAGGATGGAAGGTAGGTTGAATCTGAGAAGAAAAGCGCTATGTATTT
 
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JMSF020A08-           GGTGTTGACGTCCCCGAACCGCAAATTCCCAAATGGTGGATCTGGTTTTACTATCTAATG
JMSF036P07-           GGTGTTGACGTCCCCGAACCGCAAATTCCCAAATGGTGGATCTGGTTTTACTATCTAATG
rJMSF020A08+          GGTGTTGACGTCCCCGAACCGCAAATTCCCAAATGGTGGATCTGGTTTTACTATCTAATG
rJMSF036P07+          GGTGTTGACGTCCCCGAACCGCAAATTCCCAAATGGTGGATCTGGTTTTACTATCTAATG
                      ____________________________________________________________
consensus             GGTGTTGACGTCCCCGAACCGCAAATTCCCAAATGGTGGATCTGGTTTTACTATCTAATG
 
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JMSF020A08-           CCTACATCTTGGTCCCTAAACGGCATGCTTTCTTCGCAATATGGCGATATAGAGAAGGAT
JMSF036P07-           CCTACATCTTGGTCCCTAAACGGCATGCTTTCTTCGCAATATGGCGATATAGAGAAGGAT
rJMSF020A08+          CCTACATCTTGGTCCCTAAACGGCATGCTTTCTTCGCAATATGGCGATATAGAGAAGGAT
rJMSF036P07+          CCTACATCTTGGTCCCTAAACGGCATGCTTTCTTCGCAATATGGCGATATAGAGAAGGAT
                      ____________________________________________________________
consensus             CCTACATCTTGGTCCCTAAACGGCATGCTTTCTTCGCAATATGGCGATATAGAGAAGGAT
 
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JMSF020A08-           ATCGAGATTTTTGGAGAAAAGAAAACATAGGCAACGTTTTTGAGGGATTATTTTGGATAT
JMSF036P07-           ATCGAGATTTTTGGAGAAAAGAAAACATAGGCAACGTTTTTGAGGGATTATTTTGGATAT
rJMSF020A08+          ATCGAGATTTTTGGAGAAAAGAAAACATAGGCAACGTTTTTGAGGGATTATTTTGGATAT
rJMSF036P07+          ATCGAGATTTTTGGAGAAAAGAAAACATAGGCAACGTTTTTGAGGGATTATTTTGGATAT
                      ____________________________________________________________
consensus             ATCGAGATTTTTGGAGAAAAGAAAACATAGGCAACGTTTTTGAGGGATTATTTTGGATAT
 
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JMSF020A08-           CACCATGATCAATTACCCATTGTGGCTGTAGTGCTGATTCTGTTCCCTCTTCGTTTTGCC
JMSF036P07-           CACCATGATCAATTACCCATTGTGGCTGTAGTGCTGATTCTGTTCCCTCTTCGTTTTGCC
rJMSF020A08+          CACCATGATCAATTACCCATTGTGGCTGTAGTGCTGATTCTGTTCCCTCTTCGTTTTGCC
rJMSF036P07+          CACCATGATCAATTACCCATTGTGGCTGTAGTGCTGATTCTGTTCCCTCTTCGTTTTGCC
                      ____________________________________________________________
consensus             CACCATGATCAATTACCCATTGTGGCTGTAGTGCTGATTCTGTTCCCTCTTCGTTTTGCC
 
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JMSF020A08-           TGTTTATTCACACTTTGCATTTAGAAGTTGAACTTTCAAAGGAGGTGA            
JMSF036P07-           TGTTTATTCACACTTTGCATTTAGAAGTTGAACTTTCAAAGGAGGTGATAGAAATTGAAA
rJMSF020A08+          TGTTTATTCACACTTTGCATTTAGAAGTTGAACTTTCAAAGGAGGTGATAGAAATTGAAA
rJMSF036P07+          TGTTTATTCACACTTTGCATTTAGAAGTTGAACTTTCAAAGGAGGTGATAGAAATTGAAA
                      ____________________________________________________________
consensus             TGTTTATTCACACTTTGCATTTAGAAGTTGAACTTTCAAAGGAGGTGATAGAAATTGAAA
 
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JMSF036P07-           TATCTG                                                      
rJMSF020A08+          TATCT-GCTGGTTTATGTTTGTGCAGAAAAACATGTTAAATATTCACTTTTACTATAATG
rJMSF036P07+          TATCTGGCTGGTTTATGTTTGTGCAGAAAAACATGTTAAATATTCACTTTTACTATAATG
                      ____________________________________________________________
consensus             TATCTGGCTGGTTTATGTTTGTGCAGAAAAACATGTTAAATATTCACTTTTACTATAATG
 
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rJMSF020A08+          TTTTGAGAGAATATTGTATTTTCAATGGGTAGATATGAGGATATCATACATATTTGTAGA
rJMSF036P07+          TTTTGAGAGAATATTGTATTTTCAATGGGTAGATATGAGGATATCATACATATTTGTAGA
                      ____________________________________________________________
consensus             TTTTGAGAGAATATTGTATTTTCAATGGGTAGATATGAGGATATCATACATATTTGTAGA
 
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rJMSF020A08+          TTTCTTATGACTCATATCTGTGTT                                    
rJMSF036P07+          TTTCTTATGACTCATATCTGTGTTTGGAGTAAATACTCCCTCTCTCTACTGTACACACTG
                      ____________________________________________________________
consensus             TTTCTTATGACTCATATCTGTGTTTGGAGTAAATACTCCCTCTCTCTACTGTACACACTG