Contig 010034:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005M22Sequence289005209 (2)279010034 (2)ref|XP_009758626.1|58.9PREDICTED: uncharacterized protein LOC104211286 [Nicotiana sylvestris]
JMSF036N01Sequence636005209 (2)ref|XP_006339406.1|77.8PREDICTED: uncharacterized protein LOC102598761 [Solanum tuberosum]681010034 (2)ref|XP_009771560.1|273PREDICTED: uncharacterized protein LOC104222077, partial [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF036N01+                                                 GGTAATGTTGTCCCCGACACT
                      ____________________________________________________________
consensus                                                    GGTAATGTTGTCCCCGACACT
 
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rJMSF036N01+          ATAATCATGAACTCGGGTTTGCACGACGGGGTGTACTGGCCTAGCATCCGAGCTTTCATC
                      ____________________________________________________________
consensus             ATAATCATGAACTCGGGTTTGCACGACGGGGTGTACTGGCCTAGCATCCGAGCTTTCATC
 
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rJMSF036N01+          AAGGGCGCAGATTACACCGCAGCGTTTTGGTCCGAGGTGATCCAAGCGGTGAAGCAGCGG
                      ____________________________________________________________
consensus             AAGGGCGCAGATTACACCGCAGCGTTTTGGTCCGAGGTGATCCAAGCGGTGAAGCAGCGG
 
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rJMSF036N01+          CATAAGGTGCCACCGAAGCTTCTATACAGAACCACGGTGACAACCGGCGGCTATGCAAGA
                      ____________________________________________________________
consensus             CATAAGGTGCCACCGAAGCTTCTATACAGAACCACGGTGACAACCGGCGGCTATGCAAGA
 
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rJMSF036N01+          ACATTGGCTTACAATCCCCAGAAAATGGAGGCGTTCAACGGGGTCGTGTTGGATAAGCTG
                      ____________________________________________________________
consensus             ACATTGGCTTACAATCCCCAGAAAATGGAGGCGTTCAACGGGGTCGTGTTGGATAAGCTG
 
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rJMSF036N01+          AGGGCATACGCCGCCTTGGATATGGTCATCGACGATTTCGACATGACCTATCCGTGGCAC
                      ____________________________________________________________
consensus             AGGGCATACGCCGCCTTGGATATGGTCATCGACGATTTCGACATGACCTATCCGTGGCAC
 
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rJMSF005M22+                                                               CGTGTGG
rJMSF036N01+          TACGACAATAGGTGCAACGACGGGGTCCACTATGGCCGAGCTCCCGCCAAGCTCGTGTGG
                      ____________________________________________________________
consensus             TACGACAATAGGTGCAACGACGGGGTCCACTATGGCCGAGCTCCCGCCAAGCTCGTGTGG
 
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rJMSF005M22+          AGGGATGGGCAGATCGGGCACCAGTANTTCGTCGACNTCATGCTCGGGCACGTGTTGCTC
rJMSF036N01+          AGGGATGGGCAGATCGGGCACCAGTACTTCGTCGACCTCATGCTCGGGCACGTGTTGCTC
                      ____________________________________________________________
consensus             AGGGATGGGCAGATCGGGCACCAGTACTTCGTCGACCTCATGCTCGGGCACGTGTTGCTC
 
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rJMSF005M22+          AACGCTCTGTGCTCGAGATGGTAACGCTCGATCTTCGAGGTGCAAGNTGACCTGACAAAA
rJMSF036N01+          AACGCTCTGTGCTCGAGATGGTAACGCTCGATCTTCGAGGTGCAAGCTGACCTGACAAAA
                      ____________________________________________________________
consensus             AACGCTCTGTGCTCGAGATGGTAACGCTCGATCTTCGAGGTGCAAGCTGACCTGACAAAA
 
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rJMSF005M22+          GATTGTATGAAGCCATGAGTTTCTGCATTGATTTGAACTGTTTTATGTTCTTGATCTGTG
rJMSF036N01+          GATTGTATGAAGCCATGAGTTTCTGCATTGATTTGAACTGTTTTATGTTCTTGATCTGTG
                      ____________________________________________________________
consensus             GATTGTATGAAGCCATGAGTTTCTGCATTGATTTGAACTGTTTTATGTTCTTGATCTGTG
 
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rJMSF005M22+          CAATNGTTGTCTTGTCAGTTCTCATATACCACACATTGGCAGTTGTAACTTGTAATGTAA
rJMSF036N01+          CAATTGTTGTCTTGTCAGTTCTCATATACCACACATTGGCAGTTGTAACTTGTAATGTAA
                      ____________________________________________________________
consensus             CAATTGTTGTCTTGTCAGTTCTCATATACCACACATTGGCAGTTGTAACTTGTAATGTAA
 
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rJMSF005M22+          CTAGTATCATAGTGATGTAAATAGTAGGTTAG                            
rJMSF036N01+          CTAGTATCATAGTGATGTAAATAGTAGGTTAGTATATTATTATAGTTATGAATTTATGAT
                      ____________________________________________________________
consensus             CTAGTATCATAGTGATGTAAATAGTAGGTTAGTATATTATTATAGTTATGAATTTATGAT