Contig 010027:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF039M04+                                                                  ACCC
                      ____________________________________________________________
consensus                                                                     ACCC
 
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rJMSF039M04+          AAGTCATAAACTTNTACAGGAAAATGGGTTCACCCAACAGCTGTACAAGAAGTATCACAA
                      ____________________________________________________________
consensus             AAGTCATAAACTTNTACAGGAAAATGGGTTCACCCAACAGCTGTACAAGAAGTATCACAA
 
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rJMSF039M04+          GCGCTGTCTAGGTGAGCGCAAAAAACTTGGAATTGGCTGCAGCGAGGAAATGAATACATT
rJMSF034K01+                                          TTGGCTGCAGCGAGGAAATGAATACATT
                      ____________________________________________________________
consensus             GCGCTGTCTAGGTGAGCGCAAAAAACTTGGAATTGGCTGCAGCGAGGAAATGAATACATT
 
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rJMSF039M04+          ATACAGGTTTTGGTCATATTTCCTGCGAAATATGTTTATAAAATCAATGTATAATGAATT
rJMSF034K01+          ATACAGGTTTTTGTCATATTTCCTGCGAAATATGTTTAT-AAATCAATGTATAATGAATT
                      ____________________________________________________________
consensus             ATACAGGTTTTTGTCATATTTCCTGCGAAATATGTTTATAAAATCAATGTATAATGAATT
 
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rJMSF039M04+          CTGGAAATTTGCCCAAGAAGATGCTGCTGCTAATTATAACTATGGAATGGAGTGCCTTTT
rJMSF034K01+          CTGGAAATTTGCCCAAGAAGATGCTGCTGCTAATTATAACTATGGAATGGAGTGCCTTTT
                      ____________________________________________________________
consensus             CTGGAAATTTGCCCAAGAAGATGCTGCTGCTAATTATAACTATGGAATGGAGTGCCTTTT
 
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rJMSF039M04+          TAGGTTCTATAGTTATGGCTTGGAGAAGGACTTCAGGGAGGACCTTTATGAGGACTTTGA
rJMSF034K01+          TAGGTTCTATAGTTATGGCTTGGAGAAGGACTTCAGGGAGGACCTTTATGAGGACTTTGA
                      ____________________________________________________________
consensus             TAGGTTCTATAGTTATGGCTTGGAGAAGGACTTCAGGGAGGACCTTTATGAGGACTTTGA
 
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rJMSF039M04+          AAAGCTGACACTCGACTTCTATAACAGAGGCAACCTCTATGGCCTTGAAAAATATTGGGC
rJMSF034K01+          AAAGCTGACACTCGACTTCTATAACAGAGGCAACCTCTATGGCCTTGAAAAATATTGGGC
                      ____________________________________________________________
consensus             AAAGCTGACACTCGACTTCTATAACAGAGGCAACCTCTATGGCCTTGAAAAATATTGGGC
 
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rJMSF039M04+          ATTTCACCATTATCGTGAGGCACGAGATCAAAAAGCACCACTGAAGAAAAATCCAGAATT
rJMSF034K01+          ATTTCACCATTATCGTGAGGCACGAGATCAAAAAGCACCACTGAAGAAAAATCCAGAATT
                      ____________________________________________________________
consensus             ATTTCACCATTATCGTGAGGCACGAGATCAAAAAGCACCACTGAAGAAAAATCCAGAATT
 
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rJMSF039M04+          GGATCGGTTGCTCAAAGAAGAATACCGTAGTTTGGATGACTTCAAGCATGCCAAGGAGAA
rJMSF034K01+          GGATCGGTTGCTCAAAGAAGAATACCGTAGTTTGGATGACTTCAAGCATGCCAAGGAGAA
                      ____________________________________________________________
consensus             GGATCGGTTGCTCAAAGAAGAATACCGTAGTTTGGATGACTTCAAGCATGCCAAGGAGAA
 
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rJMSF039M04+          GACTGCTACGACATAAGAGGAGAGGGCGTGTTTCTTAGCTGTAGAACTGACAATGTCCAA
rJMSF034K01+          GACTGCTACGACATAAGAGGAGAGGGCGTGTTTCTTAGCTGTAGAACTGACAATGTCCAA
                      ____________________________________________________________
consensus             GACTGCTACGACATAAGAGGAGAGGGCGTGTTTCTTAGCTGTAGAACTGACAATGTCCAA
 
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rJMSF039M04+          AAATATTAGAAAGGTGAGGCTAACAGTTTATGCGGTGAGGTGGAATTGATTCTGTGTTTT
rJMSF034K01+          AAATATTAGAAAGGTGAGGCTAACAGTTTATGCGGTGAGGTGGAATTGATTCTGTGTTTT
                      ____________________________________________________________
consensus             AAATATTAGAAAGGTGAGGCTAACAGTTTATGCGGTGAGGTGGAATTGATTCTGTGTTTT
 
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rJMSF039M04+          GGATGGAGTGGGAAGCGAGCATTGCTGATTTTTGTACATAATAGTGTATTTCTGGGTTTG
rJMSF034K01+          GGATGGAGTGGGAAGCGAGCATTGCTGATTTTTGTACATAATAGTGTATTTCTGGGTTTG
                      ____________________________________________________________
consensus             GGATGGAGTGGGAAGCGAGCATTGCTGATTTTTGTACATAATAGTGTATTTCTGGGTTTG
 
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rJMSF039M04+          AATTTTACCCGGTTTTGAGGGCGGAGCAAAAGAGTTTATTTTTTGTATTTAGAGGTTTCA
rJMSF034K01+          AATTTTACCCGGTTTTGAGGGCGGAGCAAAAGAGTTTATTTTTTGTATTTAGAGGTTTCA
                      ____________________________________________________________
consensus             AATTTTACCCGGTTTTGAGGGCGGAGCAAAAGAGTTTATTTTTTGTATTTAGAGGTTTCA
 
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rJMSF039M04+          TTAGAAGTGCCCCTGTAATTGTTTTTTGGAAATTTTTCAGCCAACTCTGGAGAGGCACCC
rJMSF034K01+          TTAGAAGTGCCCCTGTAATTGTTTTTTGGAAATTTTTCAGCCAGCTCTGGAGAGGCACCC
                      ____________________________________________________________
consensus             TTAGAAGTGCCCCTGTAATTGTTTTTTGGAAATTTTTCAGCCAGCTCTGGAGAGGCACCC
 
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rJMSF039M04+          TTTCTTTCGTTGTTTCTAACTTGTATATAGCAAATAATGGAAAAAAA             
rJMSF034K01+          TTTCTTTCGTTGTTTCTAACTTGTATATAGCAAATAATGGGAAAAAAAATGATGAAAAAG
                      ____________________________________________________________
consensus             TTTCTTTCGTTGTTTCTAACTTGTATATAGCAAATAATGGGAAAAAAAATGATGAAAAAG