| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006I19 | Sequence | 546 | 010016 (7) | ref|XP_004244294.1| | 8e-67 | PREDICTED: B-box zinc finger protein 22 isoform X3 [Solanum lycopersicum] | 692 | 014116 (2) | |||
| JMFF027I20 | Sequence | 596 | 010016 (7) | ref|XP_009625544.1| | 3e-83 | PREDICTED: probable salt tolerance-like protein At1g78600 [Nicotiana tomentosif | 715 | 012323 (2) | ref|XP_010324399.1| | 2e-30 | PREDICTED: B-box zinc finger protein 22 isoform X1 [Solanum lycopersicum] |
| JMFF036G13 | Sequence | 564 | 010016 (7) | ref|XP_009625544.1| | 5e-74 | PREDICTED: probable salt tolerance-like protein At1g78600 [Nicotiana tomentosif | 275 | 019134 | |||
| JMFS055E11 | Sequence | 623 | 010016 (7) | emb|CDP06052.1| | 4e-86 | unnamed protein product [Coffea canephora] | |||||
| JMSF032L05 | Sequence | 695 | 010016 (7) | ref|XP_006348330.1| | 5e-98 | PREDICTED: probable salt tolerance-like protein At1g78600-like [Solanum tuberos | 699 | 010016 (7) | ref|XP_004244294.1| | 2e-98 | PREDICTED: B-box zinc finger protein 22 isoform X3 [Solanum lycopersicum] |
| JMSF047O24 | Sequence | 632 | 010016 (7) | emb|CDP06052.1| | 4e-84 | unnamed protein product [Coffea canephora] | 610 | 014116 (2) | |||
This contig is upended
. : . : . : . : . : . :
JMSF032L05+ TGAGTTATTG
rJMSF032L05- GCATATAATAGATCTAGTCATACCTTGGATGAGTTATTG
____________________________________________________________
consensus GCATATAATAGATCTAGTCATACCTTGGATGAGTTATTG
. : . : . : . : . : . :
JMSF032L05+ TCCATATAACAATAATTCTGATCAAGATCACTTAACGCAAGGAATTCTTCCACCTGCCAT
rJMSF032L05- TCCATATAACAATAATTCTGATCAAGATCACTTAACGCAAGGAATTCTTCCACCTGCCAT
____________________________________________________________
consensus TCCATATAACAATAATTCTGATCAAGATCACTTAACGCAAGGAATTCTTCCACCTGCCAT
. : . : . : . : . : . :
JMSF032L05+ TGTGGAACATTTACAGTTGCAGAACCCCCAAGCTGTGCTTTAGTAGGTGCAAGATCCCCA
JMSF047O24+ TGGAACATTTACAGTTGCAGAACCCCCAAGCTGTGCTTTAGTAGGTGCAAGATCCCCA
rJMSF032L05- TGTGGAACATTTACAGTTGCAGAACCCCCAAGCTGTGCTTTAGTAGGTGCAAGATCCCCA
____________________________________________________________
consensus TGTGGAACATTTACAGTTGCAGAACCCCCAAGCTGTGCTTTAGTAGGTGCAAGATCCCCA
. : . : . : . : . : . :
JMSF032L05+ ATCCCACTTATTTGTACTGGTGGTACTTCATTATATTGATGATTTGATGGCCCAGGGGCA
JMSF047O24+ ATCCCACTTATTTGTACTGGTGGTACTTCATTATATTGATGATTTGATGGCCCAGGGGCA
rJMSF032L05- ATCCCACTTATTTGTACTGGTGGTACTTCATTATATTGATGATTTGATGGCCCAGGGGCA
____________________________________________________________
consensus ATCCCACTTATTTGTACTGGTGGTACTTCATTATATTGATGATTTGATGGCCCAGGGGCA
. : . : . : . : . : . :
JMSF032L05+ TTTGTCCTCGAAACAGAACGAGACTGTGTCTCTAAGACCTTCTTCCCAGACTGTGAATTC
JMSF047O24+ TTTGTCCTCGAAACAGAACGAGACTGTGTCTCTAAGACCTTCTTCCCAGACTGTGAATTC
JMFF006I19+ CCAGACTGTGAATTC
rJMSF032L05- TTTGTCCTCGAAACAGAACGAGACTGTGTCTCTAAGACCTTCTTCCCAGACTGTGAATTC
____________________________________________________________
consensus TTTGTCCTCGAAACAGAACGAGACTGTGTCTCTAAGACCTTCTTCCCAGACTGTGAATTC
. : . : . : . : . : . :
JMSF032L05+ CCGGAGGAGGGCAATGGACCAGCTTCAATAGATTCAAGTCCCGCTTTCACTCCAGTAAGC
JMSF047O24+ CCGGAGGAGGGCAATGGACCAGCTTCAATAGATTCAAGTCCCGCTTTCACTCCAGTAAGC
JMFF006I19+ CCGGAGGAGGGCAATGGACCAGCTTCAATAGATTCAAGTCCCGCTTTCACTCCAGTAAGC
JMFF036G13+ GGACCAGGTTCAGTAGGTTCAAGTCCTACTTTCACCCCAGTAAGC
JMFF027I20+ GGACCAGGTTCAGTAGGTTCAAGTCCTACTTTCACCCCAGTAAGC
JMFS055E11+ GGACCAGGTTCAGTAGGTTCAAGTCCTACTTTCACCCCAGTAAGC
rJMSF032L05- CCGGAGGAGGGCAATGGACCAGCTTCAATAGATTCAAGTCCCGCTTTCACTCCAGTAAGC
____________________________________________________________
consensus CCGGAGGAGGGCAATGGACCAGCTTCAATAGATTCAAGTCCCGCTTTCACTCCAGTAAGC
. : . : . : . : . : . :
JMSF032L05+ AGGAATCTTTGATGAGCAGAGACGTATGCATTAGCTTTGTGAATAGCAACATCGCAGTTC
JMSF047O24+ AGGAATCTTTGATGAGCAGAGACGTATGCATTAGCTTTGTGAATAGCAACATCGCAGTTC
JMFF006I19+ AGGAATCTTTGATGAGCAGAGACGTATGCATTAGCTTTGTGAATAGCAACATCGCAGTTC
JMFF036G13+ AGGAATCTTTGGTGAGCAGAGACATAAGCATTGGCTGTATGAATGGCAACATCACACTTC
JMFF027I20+ AGGAATCTTTGGTGAGCAGAGACATAAGCATTGGCTGTATGAATGGCAACATCACACTTC
JMFS055E11+ AGGAATCTTTGGTGAGCAGAGACATAAGCATTGGCTGTATGAATGGCAACATCACACTTC
rJMSF032L05- AGGAATCTTTGATGAGCAGAGACGTATGCATTAGCTTTGTGAATAGCAACATCGCAGTTC
____________________________________________________________
consensus AGGAATCTTTGATGAGCAGAGACGTATGCATTAGCTTTGTGAATAGCAACATCGCAGTTC
. : . : . : . : . : . :
JMSF032L05+ CTGCAGAGCAAAGCTCGATCCTCCAGGCAGAAGAAGTAGCCTACCGTTTCCTGGCAGATG
JMSF047O24+ CTGCAGAGCAAAGCTCGATCCTCCAGGCAGAAGAAGTAGCCTACCGTTTCCTGGCAGATG
JMFF006I19+ CTGCAGAGCAAAGCTCGATCCTCCAGGCAGAAGAAGTAGCCTACCGTTTCCTGGCAGATG
JMFF036G13+ CTGCAGAGCAGAGCTCGATCCTCAAGACAGAAAAAGTAGCCAACAGCTTCCTGACAGATG
JMFF027I20+ CTGCAGAGCAGAGCTCGATCCTCAAGACAGAAAAAGTAGCCAACAGCTTCCTGACAGATG
JMFS055E11+ CTGCAGAGCAGAGCTCGATCCTCAAGACAGAAAAAGTAGCCAACAGCTTCCTGACAGATG
rJMSF032L05- CTGCAGAGCAAAGCTCGATCCTCCAGGCAGAAGAAGTAGCCTACCGTTTCCTGGCAGATG
____________________________________________________________
consensus CTGCAGAGCAAAGCTCGATCCTCCAGGCAGAAGAAGTAGCCTACCGTTTCCTGGCAGATG
. : . : . : . : . : . :
JMSF032L05+ TCGCACTTGGGCATCGGCGAGGACGAGCCGGAGAGCGGAACTCTCTGGTGCTTAGAGGCG
JMSF047O24+ TCGCACTTGGGCATCGGCGAGGACGAGCCGGAGAGCGGAACTCTCTGGTGCTTAGAGGCG
JMFF006I19+ TCGCACTTGGGCATCGGCGAGGACGAGCCGGAGAGCGGAACTCTNTGGTGCTTAGAGGCG
JMFF036G13+ TCGCACTTGGGAATCGACGAAGACGAGCCAGAGAGCGGAACTCGCTGGTGCTTAGAAGCG
JMFF027I20+ TCGCACTTGGGAATCGACGAAGACGAGCCAGAGAGCGGAACTCGCTGGTGCTTAGAAGCG
JMFS055E11+ TCGCACTTGGGAATCGACGAAGACGAGCCAGAGAGCGGAACTCGCTGGTGCTTAGAAGCG
rJMSF032L05- TCGCACTTGGGCATCGGCGAGGACGAGCCGGAGAGCGGAACTCTCTGGTGCTTAGAGGCG
____________________________________________________________
consensus TCGCACTTGGGCATCGGCGAGGACGAGCCGGAGAGCGGAACTCTCTGGTGCTTAGAGGCG
. : . : . : . : . : . :
JMSF032L05+ AGCTTATTGGCGGCGTGAACCTTGGCGTCGCAGGACCAGCAAAGCGCCGCCTCATCGGCG
JMSF047O24+ AGCTTATTGGCGGCGTGAACCTTGGCGTCGCAGGACCAGCAAAGCGCCGCCTCATCGGCG
JMFF006I19+ AGCTTATTGGCGGCGTGAACCTTGGCGTCGCAGGACCAGCAAAGCGCCGCCTCATCGGCG
JMFF036G13+ AGCTTATTGGCGGCGTGAACCTTCTGGTCGCAGGACCAGCAGAGCGCCGCCTCGTCGGCA
JMFF027I20+ AGCTTATTGGCGGCGTGAACCTTCTGGTCGCAGGACCAGCAGAGCGCCGCCTCGTCGGCA
JMFS055E11+ AGCTTATTGGCGGCGTGAACCTTCTGGTCGCAGGACCAGCAGAGCGCCGCCTCGTCGGCA
rJMSF032L05- AGCTTATTGGCGGCGTGAACCTTGGCGTCGCAGGACCAGCAAAGCGCCGCCTCATCGGCG
____________________________________________________________
consensus AGCTTATTGGCGGCGTGAACCTTGGCGTCGCAGGACCAGCAAAGCGCCGCCTCATCGGCG
. : . : . : . : . : . :
JMSF032L05+ CAACACAGCACGTTCGCCTCCGCGACCTCACACACGTTGCACTGAATCTTCATCCTCC
JMSF047O24+ CAACACAGCACGTTCGCCTCCGCGACCTCACACACGTTGCACTGAATCTTCATCCTCC
JMFF006I19+ CAACACAGCACGTTCGCCTCCGCGACCTCACACACGTTGCACTGAATCTTCATCCTCC
JMFF036G13+ CAGCAGAGCACGTTCGCCTCCGCTACCTCGCACACGTTGCACTGAATCTTCATCCTCC
JMFF027I20+ CAGCAGAGCACGTTCGCCTCCGCTACCTCGCACACGTTGCACTGAATCTTCATCCTCC
JMFS055E11+ CAGCAGAGCACGTTCGCCTCCGCTACCTCGCACACGTTGCACTGAATCTTCATCCTCC
rJMSF032L05- CAACACAGCACGTTCGCCTCCGCGACCTCACACACGTTGCACTGAATCTTCATCCTCCAC
____________________________________________________________
consensus CAACACAGCACGTTCGCCTCCGCGACCTCACACACGTTGCACTGAATCTTCATCCTCCAC
. : . : . : . : . : . :
rJMSF032L05- CTTACTCCAGAGCTAGCTTTCCGCCACCGCTATTCTCTCCGGTAAAAAGGAAACCTGACC
____________________________________________________________
consensus CTTACTCCAGAGCTAGCTTTCCGCCACCGCTATTCTCTCCGGTAAAAAGGAAACCTGACC