Contig 010013:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031L19Sequence657010013 (6)ref|XP_004240972.1|6e-98PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Solanum lycoper723010013 (6)ref|XP_009612706.1|2e-111PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Nicotiana tomen
JMSF032L19Sequence613010013 (6)ref|XP_004240972.1|2e-86PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Solanum lycoper567010013 (6)ref|XP_009612706.1|1e-86PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Nicotiana tomen
JMSF051K17Sequence703010013 (6)ref|XP_004240972.1|5e-123PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Solanum lycoper744010013 (6)ref|XP_009612706.1|5e-117PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Nicotiana tomen

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF032L19- GAAGAATCTGTTTTCGACGCATATATGTTTTTCAT
JMSF031L19- GAAGAATCTGTTTTCGACGCATATATGTTTTTCAT
                      ____________________________________________________________
consensus GAAGAATCTGTTTTCGACGCATATATGTTTTTCAT
 
. : . : . : . : . : . :
JMSF032L19- GCCTGACCAATTCACCATACCGCAAACCCACGGCTAGGAATCTATAAATCTTCGTCTACC
JMSF031L19- GCCTGACCAATTCACCATACCGCAAACCCACGGCTAGGAATCTATAAATCTTCGTCTACC
JMSF051K17- GCAAACCCACGGCTAGGAATCTATAAATCTTCGTCTACC
                      ____________________________________________________________
consensus GCCTGACCAATTCACCATACCGCAAACCCACGGCTAGGAATCTATAAATCTTCGTCTACC
 
. : . : . : . : . : . :
JMSF032L19- ATCAAGCATTCAACCTCTCTGCTTTTTCGCTTAATTATTAGCTCCGTTCCGATCGATGGC
JMSF031L19- ATCAAGCATTCAACCTCTCTGCTTTTTCGCTTAATTATTAGCTCCGTTCCGATCGATGGC
JMSF051K17- ATCAAGCATTCAACCTCTCTGCTTTTTCGCTTAATTATTAGCTCCGTTCCGATCGATGGC
                      ____________________________________________________________
consensus ATCAAGCATTCAACCTCTCTGCTTTTTCGCTTAATTATTAGCTCCGTTCCGATCGATGGC
 
. : . : . : . : . : . :
JMSF032L19- CACCGGAAAAGGTAAAAAGACCGTCTTGAAGTTCGATTCCGAGGATGACGTGGCGGTGGC
JMSF031L19- CACCGGAAAAGGTAAAAAGACCGTCTTGAAGTTCGATTCCGAGGATGACGTGGCGGTGGC
JMSF051K17- CACCGGAAAAGGTAAAAAGACCGTCTTGAAGTTCGATTCCGAGGATGACGTGGCGGTGGC
                      ____________________________________________________________
consensus CACCGGAAAAGGTAAAAAGACCGTCTTGAAGTTCGATTCCGAGGATGACGTGGCGGTGGC
 
. : . : . : . : . : . :
JMSF032L19- TCTGGCGAAATACACCGCCNATTTATCGGCCAAGTTCGTCGCANAGAAAGGCTCCTTCAC
JMSF031L19- TCTGGCGAAATACACCGCCGATTTATCGGCCAAGTTCGTCGCACAGAAAGGCTCCTTCAC
JMSF051K17- TCTGGCGAAATACACCGCCGATTTATCGGCCAAGTTCGTCGCACAGAAAGGCTCCTTCAC
                      ____________________________________________________________
consensus TCTGGCGAAATACACCGCCGATTTATCGGCCAAGTTCGTCGCACAGAAAGGCTCCTTCAC
 
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JMSF032L19- TGTTGTCCTCTCCGGAGGTTCCCTCATCGACACCATGAGGAAACTAGTGGAGGCTCCTTA
JMSF031L19- TGTTGTCCTCTCCGGAGGTTCCCTCATCGACACCATGAGGAAACTAGTGGAGGCTCCTTA
JMSF051K17- TGTTGTCCTCTCCGGAGGTTCCCTCATCGACACCATGAGGAAACTAGTGGAGGCTCCTTA
rJMSF051K17+ ACACCATGAGGAAACTAGTGGAGGCTCCTTA
rJMSF031L19+ TTA
                      ____________________________________________________________
consensus TGTTGTCCTCTCCGGAGGTTCCCTCATCGACACCATGAGGAAACTAGTGGAGGCTCCTTA
 
. : . : . : . : . : . :
JMSF032L19- CAAGGATTCAGTGGATTGGTCGAAATGGTGGATCTTTTGGGTGGATGAGAGGGTGGTTCC
JMSF031L19- CAAGGATTCAGTGGATTGGTCGAAATGGTGGATCTTTTGGGTGGATGAGAGGGTGGTTCC
JMSF051K17- CAAGGATTCAGTGGATTGGTCGAAATGGTGGATCTTTTGGGTGGATGAGAGGGTGGTTCC
rJMSF051K17+ CAAGGATTCAGTGGATTGGTCGAAATGGTGGATCTTTTGGGTGGATGAGAGGGTGGTTCC
rJMSF031L19+ CAAGGATTCAGTGGATTGGTCGAAATGGTGGATCTTTTGGGTGGATGAGAGGGTGGTTCC
                      ____________________________________________________________
consensus CAAGGATTCAGTGGATTGGTCGAAATGGTGGATCTTTTGGGTGGATGAGAGGGTGGTTCC
 
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JMSF032L19- ACTGGATCACCCGGACAGCAATTATCTTCTTGCCTGGAATGGTTTTCTTTCAAAGGTACC
JMSF031L19- ACTGGATCACCCGGACAGCAATTATCTTCTTGCCTGGAATGGTTTTCTTTCAAAGGTACC
JMSF051K17- ACTGGATCACCCGGACAGCAATTATCTTCTTGCCTGGAATGGTTTTCTTTCAAAGGTACC
rJMSF032L19+ CTGGAATGGTTTTCTNTCAAAGGTACC
rJMSF051K17+ ACTGGATCACCCGGACAGCAATTATCTTCTTGCCTGGAATGGTTTTCTTTCAAAGGTACC
rJMSF031L19+ ACTGGATCACCCGGACAGCAATTATCTTCTTGCCTGGAATGGTTTTCTTTCAAAGGTACC
                      ____________________________________________________________
consensus ACTGGATCACCCGGACAGCAATTATCTTCTTGCCTGGAATGGTTTTCTTTCAAAGGTACC
 
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JMSF032L19- GATTCCCTCGACTAACATTTATGCAATCAATGACAAGAAGTCCCCAGAAGGTGCAGCTGA
JMSF031L19- GATTCCCTCGACTAACATTTATGCAATCAATGACAAGAAGTCCCCAGAAGGTGCAGCTGA
JMSF051K17- GATTCCCTCGACTAACATTTATGCAATCAATGACAAGAAGTCCCCAGAAGGTGCAGCTGA
rJMSF032L19+ GATTCCCTCGACTAACATTTATGCAATCAATGACAAGAAGTCCCCAGAAGGTGCAGCTGA
rJMSF051K17+ GATTCCCTCGACTAACATTTATGCAATCAATGACAAGAAGTCCCCAGAAGGTGCAGCTGA
rJMSF031L19+ GATTCCCTCGACTAACATTTATGCAATCAATGACAAGAAGTCCCCAGAAGGTGCAGCTGA
                      ____________________________________________________________
consensus GATTCCCTCGACTAACATTTATGCAATCAATGACAAGAAGTCCCCAGAAGGTGCAGCTGA
 
. : . : . : . : . : . :
JMSF032L19- TGATTACGAGGCTCGCCTCAAGCAGCTGGTTGAGTCCAAGGTTCTACCTCTATCTGCTAC
JMSF031L19- TGATTACGAGGCTCGCCTCAAGCAGCTGGTTGAGTCCAAGGTTCTACCTCTATCTGCTAC
JMSF051K17- TGATTACGAGGCTCGCCTCAAGCAGCTGGTTGAGTCCAAGGTTCTACCTCTATCTGCTAC
rJMSF032L19+ TGATTACGAGGCTCGCCTCAAGCAGCTGGTTGAGTCCAAGGTTCTACCTCTATCTGCTAC
rJMSF051K17+ TGATTACGAGGCTCGCCTCAAGCAGCTGGTTGAGTCCAAGGTTCTACCTCTATCTGCTAC
rJMSF031L19+ TGATTACGAGGCTCGCCTCAAGCAGCTGGTTGAGTCCAAGGTTCTACCTCTATCTGCTAC
                      ____________________________________________________________
consensus TGATTACGAGGCTCGCCTCAAGCAGCTGGTTGAGTCCAAGGTTCTACCTCTATCTGCTAC
 
. : . : . : . : . : . :
JMSF032L19- TGGATTCCCCAAGTTTGATCTGATGCTGCTAGGTATGG
JMSF031L19- TGGATTCCCCAAGTTTGATCTGATGCTGCTAGGTATGGGGCCCGATGGGCATCTGGCTTC
JMSF051K17- TGGATTCCCCAAGTTTGATCTGATGCTGCTAGGTATGGGGCCCGATGGGCATCTGGCTTC
rJMSF032L19+ TGGATTCCCCAAGTTTGATCTGATGCTGCTAGGTATGGGGCCCGATGGGCATCTGGCTTC
rJMSF051K17+ TGGATTCCCCAAGTTTGATCTGATGCTGCTAGGTATGGGGCCCGATGGGCATCTGGCTTC
rJMSF031L19+ TGGATTCCCCAAGTTTGATCTGATGCTGCTAGGTATGGGGCCCGATGGGCATCTGGCTTC
                      ____________________________________________________________
consensus TGGATTCCCCAAGTTTGATCTGATGCTGCTAGGTATGGGGCCCGATGGGCATCTGGCTTC
 
. : . : . : . : . : . :
JMSF031L19- TCTATTCCCAAATCGTCCTCAC
JMSF051K17- TCTATTCCCAAATCGTCCTCACCGCCACGAGAAGGAGAGATGGGTAACTTTCATTACAGA
rJMSF032L19+ TCTATTCCCAAATCGTCCTCACCGCCACGAGAAGGAGAGATGGGTAACTTTCATTACAGA
rJMSF051K17+ TCTATTCCCAAATCGTCCTCACCGCCACGAGAAGGAGAGATGGGTAACTTTCATTACAGA
rJMSF031L19+ TCTATTCCCAAATCGTCCTCACCGCCACGAGAAGGAGAGATGGGTAACTTTCATTACAGA
                      ____________________________________________________________
consensus TCTATTCCCAAATCGTCCTCACCGCCACGAGAAGGAGAGATGGGTAACTTTCATTACAGA
 
. : . : . : . : . : . :
JMSF051K17- TTCACCAAAACCGCCTCCCCCAAGGATCACTTTCACATTTCCAGTGATCAACGCTGCTTC
rJMSF032L19+ TTCACCAAAACCGCCTCCCCCAAGGATCACTTTCACATTTCCAGTGATCAACGCTGCTTC
rJMSF051K17+ TTCACCAAAACCGCCTCCCCCAAGGATCACTTTCACATTTCCAGTGATCAACGCTGCTTC
rJMSF031L19+ TTCACCAAAACCGCCTCCCCCAAGGATCACTTTCACATTTCCAGTGATCAACGCTGCTTC
                      ____________________________________________________________
consensus TTCACCAAAACCGCCTCCCCCAAGGATCACTTTCACATTTCCAGTGATCAACGCTGCTTC
 
. : . : . : . : . : . :
JMSF051K17- A
rJMSF032L19+ AGAGAACGCCATGGTGCTCACCGGTGCTGAGTTAGCCTACATGGTGAATATTGCTTTGGG
rJMSF051K17+ AGAGAACGCCATGGTGCTCACCGGTGCTGAGTTAGCCTACATGGTGAATATTGCTTTGGG
rJMSF031L19+ AGAGAACGCCATGGTGCTCACCGGTGCTGAGTTAGCCTACATGGTGAATATTGCTTTGGG
                      ____________________________________________________________
consensus AGAGAACGCCATGGTGCTCACCGGTGCTGAGTTAGCCTACATGGTGAATATTGCTTTGGG
 
. : . : . : . : . : . :
rJMSF032L19+ TAACGGGGTGGCTTCTGATGGGATACCCCCGCCAATTACTGACCTTTCGGCTGAGGATGA
rJMSF051K17+ TAACGGGGTGGCTTCTGATGGGATACCCCCGCCAATTACTGACCTTTCGGCTGAGGATGA
rJMSF031L19+ TAACGGGGTGGCTTCTGATGGGATACCCCCGCCAATTACTGACCTTTCGGCTGAGGATGA
                      ____________________________________________________________
consensus TAACGGGGTGGCTTCTGATGGGATACCCCCGCCAATTACTGACCTTTCGGCTGAGGATGA
 
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rJMSF032L19+ GCTGACCTTTTTCTTGGACAAGGATGCATCTTNTAAACTGTGAAGCCATGGACAAATAGT
rJMSF051K17+ GCTGACCTTTTTCTTGGACAAGGATGCATCTTCTAAACTGTGAAGCCATGGACAAATAGT
rJMSF031L19+ GCTGACCTTTTTCTTGGACAAGGATGCATCTTCTAAACTGTGAAGCCATGGACAAATAGT
                      ____________________________________________________________
consensus GCTGACCTTTTTCTTGGACAAGGATGCATCTTCTAAACTGTGAAGCCATGGACAAATAGT
 
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rJMSF032L19+ AACTGCAAGCACCACTTTAATAACTAGTTCCCTCATTATCATTTCATCAATGGTGCCA
rJMSF051K17+ AACTGCAAGCACCACTTTAATAACTAGTTCCCTCATTATCATTTCATCAATGGTGCCATT
rJMSF031L19+ AACTGCAAGCACCACTTTAATAACTAGTTCCCTCATTATCATTTCATCAATGGTGCCATT
                      ____________________________________________________________
consensus AACTGCAAGCACCACTTTAATAACTAGTTCCCTCATTATCATTTCATCAATGGTGCCATT
 
. : . : . : . : . : . :
rJMSF051K17+ TTAATTACTTCCCTTGTTGTGCTGTCTGTGTACTCCATTCCTTGTATCTT
rJMSF031L19+ TTAATTACTTCCCTTGTTGTGCTGTCTGTGTACTCCATTCCTTGTATCTTTGTTATAATG
                      ____________________________________________________________
consensus TTAATTACTTCCCTTGTTGTGCTGTCTGTGTACTCCATTCCTTGTATCTTTGTTATAATG