clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF011I05 | Sequence | 347 | 006459 (5) | ref|XP_009767201.1| | 1e-50 | PREDICTED: lysosomal Pro-X carboxypeptidase [Nicotiana sylvestris] | 690 | 010008 (4) | ref|XP_006343677.1| | 1e-108 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Solanum tuberosum] |
JMSF012C06 | Sequence | 495 | 006459 (5) | gb|AAM15096.1| | 3e-51 | putative prolylcarboxypeptidase [Arabidopsis thaliana] | 763 | 010008 (4) | ref|XP_006343677.1| | 6e-126 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Solanum tuberosum] |
JMSF015F04 | Sequence | 200 | 006459 (5) | 765 | 010008 (4) | ref|XP_009617834.1| | 8e-126 | PREDICTED: lysosomal Pro-X carboxypeptidase [Nicotiana tomentosiformis] | |||
JMSF030O11 | Sequence | 647 | 006459 (5) | gb|AAM15096.1| | 1e-80 | putative prolylcarboxypeptidase [Arabidopsis thaliana] | 709 | 010008 (4) | ref|XP_006343677.1| | 6e-57 | PREDICTED: lysosomal Pro-X carboxypeptidase-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF012C06+ ATGGTCAGCTTTTGTGTATACAGCAATGGTGAATTATGNTACGGAGGCAAA
rJMSF015F04+ TATGGTCAGCTTTTGTGTATACAGCAATGGTGAATTATGCTACGGAGGCAAA
____________________________________________________________
consensus TATGGTCAGCTTTTGTGTATACAGCAATGGTGAATTATGCTACGGAGGCAAA
. : . : . : . : . : . :
rJMSF011I05+ CCCAGTAGAAAAGATGTGCAAGATTATTGATGGATT
rJMSF012C06+ TTTTATGAAGCCATTGCCTGCGTACCCAGTAGAAAAGATGTGCAAGATTATTGATGGATT
rJMSF015F04+ TTTTATGAAGCCATTGCCTGCGTACCCAGTAGAAAAGATGTGCAAGATTATTGATGGATT
____________________________________________________________
consensus TTTTATGAAGCCATTGCCTGCGTACCCAGTAGAAAAGATGTGCAAGATTATTGATGGATT
. : . : . : . : . : . :
rJMSF011I05+ TCCAGCAGGGGCTTCAAAGATTAGCAGGGCGTTTGCTGCTGCAAGTTTATATTACAATTA
rJMSF012C06+ TCCAGCAGGGGCTTCAAAGATTAGCAGGGCGTTTGCTGCTGCAAGTTTATATTACAATTA
rJMSF015F04+ TCCAGCAGGGGCTTCAAAGATTAGCAGGGCGTTTGCTGCTGCAAGTTTATATTACAATTA
____________________________________________________________
consensus TCCAGCAGGGGCTTCAAAGATTAGCAGGGCGTTTGCTGCTGCAAGTTTATATTACAATTA
. : . : . : . : . : . :
rJMSF011I05+ CTCTGGAACAGAAAAGTGTTTCCACATAGAAGATGAATCTGATGATCATGGACTCCATGG
rJMSF012C06+ CTCTGGAACAGAAAAGTGTTTCCACATAGAAGATGAATCTGATGATCATGGACTCCATGG
rJMSF015F04+ CTCTGGAACAGAAAAGTGTTTCCACATAGAAGATGAATCTGATGATCATGGACTCCATGG
____________________________________________________________
consensus CTCTGGAACAGAAAAGTGTTTCCACATAGAAGATGAATCTGATGATCATGGACTCCATGG
. : . : . : . : . : . :
rJMSF011I05+ TTGGGACTGGCAGGCGTGTACAGAAATGGTTATGCCAATGGTTGTGTCGAAGGAGAGCAT
rJMSF012C06+ TTGGGACTGGCAGGCGTGTACAGAAATGGTTATGCCAATGGTTGTGTCGAAGGAGAGCAT
rJMSF015F04+ TTGGGACTGGCAGGCGTGTACAGAAATGGTTATGCCAATGGTTGTGTCGAAGGAGAGCAT
____________________________________________________________
consensus TTGGGACTGGCAGGCGTGTACAGAAATGGTTATGCCAATGGTTGTGTCGAAGGAGAGCAT
. : . : . : . : . : . :
rJMSF011I05+ GTTTCCTCCATCTTCATATAGCTATGAAGAAACCGAAAGGAGCTGCCAAAGGATGTATGG
rJMSF012C06+ GTTTCCTCCATCTTCATATAGCTATGAAGAAACCGAAAGGAGCTGCCAAAGGATGTATGG
rJMSF015F04+ GTTTCCTCCATCTTCATATAGCTATGAAGAAACCGAAAGGAGCTGCCAAAGGATGTATGG
rJMSF030O11+ CTTCATATAGCTATGAAGAAACCGAAAGGAGCTGCCAAAGGATGTATGG
____________________________________________________________
consensus GTTTCCTCCATCTTCATATAGCTATGAAGAAACCGAAAGGAGCTGCCAAAGGATGTATGG
. : . : . : . : . : . :
rJMSF011I05+ AGTGAAGCCCAGACCACACTGGATCACCACTCACTTTGGTGGCAATAGGATTGAGCAGGT
rJMSF012C06+ AGTGAAGCCCAGACCACACTGGATCACCACTCACTTTGGTGGCAATAGGATTGAGCAGGT
rJMSF015F04+ AGTGGAGCCCAGACCACACTGGATCACCACTCACTTTGGTGGCAATAGGATTGAGCAGGT
rJMSF030O11+ AGTGAAGCCCAGACCACACTGGATCACCACTCACTTTGGTGGCAATAGGATTGAGCAGGT
____________________________________________________________
consensus AGTGAAGCCCAGACCACACTGGATCACCACTCACTTTGGTGGCAATAGGATTGAGCAGGT
. : . : . : . : . : . :
rJMSF011I05+ TTTGAAGAGATTTGGGAGCAACATCATTTTCTCTAATGGAATGCAAGATCCATGGAGTAG
rJMSF012C06+ TTTGAAGAGATTTGGGAGCAACATCATTTTCTCTAATGGAATGCAAGATCCATGGAGTAG
rJMSF015F04+ TTTGAAGAGATTTGGGAGCAACATCATTTTCTCTAATGGAATGCAAGATCCATGGAGTAG
rJMSF030O11+ TTTGAAGAGATTTGGGAGCAACATCATTTTCTCTAATGGAATGCAAGATCCATGGAGTAG
____________________________________________________________
consensus TTTGAAGAGATTTGGGAGCAACATCATTTTCTCTAATGGAATGCAAGATCCATGGAGTAG
. : . : . : . : . : . :
rJMSF011I05+ AGGAGGTGTGCTGAAAAATATATCAGATAGCATAGTGGCACTGGTGACTGAGAAAGGAGC
rJMSF012C06+ AGGAGGTGTGCTGAAAAATATATCAGATAGCATAGTGGCACTGGTGACTGAGAAAGGAGC
rJMSF015F04+ AGGAGGTGTGCTGAAAAATATATCAGATAGCATAGTGGCACTGGTGACTGAGAAAGGAGC
rJMSF030O11+ AGGAGGTGTGCTGAAAAATATATCAGATAGCATAGTGGCACTGGTGACTGAGAAAGGAGC
____________________________________________________________
consensus AGGAGGTGTGCTGAAAAATATATCAGATAGCATAGTGGCACTGGTGACTGAGAAAGGAGC
. : . : . : . : . : . :
rJMSF011I05+ ACACCATGCTGATTTTAGATCTGCTACAAAGAATGACCCAGACTGGCTCATCCAACAAAG
rJMSF012C06+ ACACCATGCTGATTTTAGATCTGCTACAAAGAATGACCCAGACTGGCTCATCCAACAAAG
rJMSF015F04+ ACACCATGCTGATTTTAGATCTGCTACAAAGAATGACCCAGACTGGCTCATCCAACAAAG
rJMSF030O11+ ACACCATGCTGATTTTAGATCTGCTACAAAGAATGACCCAGACTGGCTCATCCAACAAAG
____________________________________________________________
consensus ACACCATGCTGATTTTAGATCTGCTACAAAGAATGACCCAGACTGGCTCATCCAACAAAG
. : . : . : . : . : . :
rJMSF011I05+ GGAGAAAGAAGTAGACATTCTCCAGAAGTGGATTGGGGAGTATTACAGGGATATGGATAT
rJMSF012C06+ GGAGAAAGAAGTAGACATTCTCCAGAAGTGGATTGGGGAGTATTACAGGGATATGGATAT
rJMSF015F04+ GGAGAAAGAAGTAGACATTCTCCAGAAGTGGATTGGGGAGTATTACAGGGATATGGATAT
rJMSF030O11+ GGAGAAAGAAGTAGACATTCTCCAGAAGTGGATTGGGGAGTATTACAGGGATATGGATAT
____________________________________________________________
consensus GGAGAAAGAAGTAGACATTCTCCAGAAGTGGATTGGGGAGTATTACAGGGATATGGATAT
. : . : . : . : . : . :
rJMSF011I05+ GAATCAAAATTGAACCAACTCGATCTTAATCCTCGGAAACATGAACCCATAAACAAACTA
rJMSF012C06+ GAATCAAAATTGAACCAACTCGATCTTAATCCTCGGAAACATGAACCCATAAACAAACTA
rJMSF015F04+ GAATCAAAATTGAACCAACTCGATCTTAATCCTCGGAAACATGAACCCATAAACAAACTA
rJMSF030O11+ GAATCAAAATTGAACCAACTCGATCTTAATCCTCGGAAACATGAACCCATAAACAAACTA
____________________________________________________________
consensus GAATCAAAATTGAACCAACTCGATCTTAATCCTCGGAAACATGAACCCATAAACAAACTA
. : . : . : . : . : . :
rJMSF011I05+ AAACTACCAATTCAACAACA
rJMSF012C06+ AAACTACCAATTCAACAACA
rJMSF015F04+ AAACTACCAATTCAACAACA
rJMSF030O11+ AAACTACCAATTCAACAACAATTTCAACTTTAAACCAAACCGAACTCTCATATTTCCTCT
____________________________________________________________
consensus AAACTACCAATTCAACAACAATTTCAACTTTAAACCAAACCGAACTCTCATATTTCCTCT
. : . : . : . : . : . :
rJMSF030O11+ TCTTAAATAAATGGCCAAATTAAACAATGGTTGATGGAAAAAACATTTACTTCTAATTTC
____________________________________________________________
consensus TCTTAAATAAATGGCCAAATTAAACAATGGTTGATGGAAAAAACATTTACTTCTAATTTC
. : . : . : . : . : . :
rJMSF030O11+ TGTTTTTTTCTTTTAAATGACAAATGCTCATCATCCTCCCCTCCATCATGGGTAGGCCTA
____________________________________________________________
consensus TGTTTTTTTCTTTTAAATGACAAATGCTCATCATCCTCCCCTCCATCATGGGTAGGCCTA
. : . : . : . : . : . :
rJMSF030O11+ TCCTTATTTTGGCCACCAGGATATTGCAAGGTAGCATGATGAAGGTCGACGATGAACAAA
____________________________________________________________
consensus TCCTTATTTTGGCCACCAGGATATTGCAAGGTAGCATGATGAAGGTCGACGATGAACAAA
. : . : . : . : . : . :
rJMSF030O11+ GCCATCATTTCGATCGGTTTTAGCTACCTTACAATATCCAGGCACCCAAAACAATGATAT
____________________________________________________________
consensus GCCATCATTTCGATCGGTTTTAGCTACCTTACAATATCCAGGCACCCAAAACAATGATAT