Contig 010007:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009A21Sequence617010007 (2)ref|XP_006345308.1|1e-50PREDICTED: sugar transporter ERD6-like 5-like isoform X1 [Solanum tuberosum] re
JMSF030N13Sequence673006578 (2)ref|XP_006345308.1|2e-70PREDICTED: sugar transporter ERD6-like 5-like isoform X1 [Solanum tuberosum] re691010007 (2)ref|XP_006345308.1|3e-89PREDICTED: sugar transporter ERD6-like 5-like isoform X1 [Solanum tuberosum] re

Alignment

This contig is upended


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JMFN009A21-           AAGTGTGGCATTGATGGACAAAATTGGTCGACGTCTAATTCTGATGGTAAGGATAGGAGG
                      ____________________________________________________________
consensus             AAGTGTGGCATTGATGGACAAAATTGGTCGACGTCTAATTCTGATGGTAAGGATAGGAGG
 
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JMFN009A21-           CGATAGAATAATGGAAGTAATAGATGGAGAAACCTCCAGCTTGGTTGGCGTGAGTGGCCG
                      ____________________________________________________________
consensus             CGATAGAATAATGGAAGTAATAGATGGAGAAACCTCCAGCTTGGTTGGCGTGAGTGGCCG
 
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JMFN009A21-           TGCACTCTCGTATGGAAAAACTAATCTGGCCAGCACTTTGCCCCTTAATTGGGCCGTGAC
                      ____________________________________________________________
consensus             TGCACTCTCGTATGGAAAAACTAATCTGGCCAGCACTTTGCCCCTTAATTGGGCCGTGAC
 
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JMFN009A21-           CAAAAAGTAGTAGATGGAAATGGAGGGACGATATACAATACATACATACTACATTGCAAT
                      ____________________________________________________________
consensus             CAAAAAGTAGTAGATGGAAATGGAGGGACGATATACAATACATACATACTACATTGCAAT
 
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JMFN009A21-           AATGTTTTTGTTTTTGCAGGTTACTGCCACGGGAACCTGCCTAGGATGTTTGATTGCAGG
rJMSF030N13+                            GGTTACTGCCACGGGAACCTGCCTAGGATGTTTGATTGCAGG
                      ____________________________________________________________
consensus             AATGTTTTTGTTTTTGCAGGTTACTGCCACGGGAACCTGCCTAGGATGTTTGATTGCAGG
 
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JMFN009A21-           GTTGGGATTTGCTTTTAAGGGGGGGTATGAAGAGCTGGAACAACTTTCGCCTGCATTAGT
rJMSF030N13+          GTTGGGATTTGCTTTTAAGGGGGGGTATGAAGAGCTGGAACAACTTTCGCCTGCATTAGT
                      ____________________________________________________________
consensus             GTTGGGATTTGCTTTTAAGGGGGGGTATGAAGAGCTGGAACAACTTTCGCCTGCATTAGT
 
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JMFN009A21-           ATTAACTGGCATACTGGTGTTTTCAGTGTGTTTTTCTGCTGGCATGGGTGGTACACCCTG
rJMSF030N13+          ATTAACTGGCATACTGGTGTTTTCAGTGTGTTTTTCTGCTGGCATGGGTGGTACACCCTG
                      ____________________________________________________________
consensus             ATTAACTGGCATACTGGTGTTTTCAGTGTGTTTTTCTGCTGGCATGGGTGGTACACCCTG
 
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JMFN009A21-           GGTTATCATGTCAGAGATATTTCCAGTAAACATCAAGGGAACAGGTGGAAGTCTTGTAAC
rJMSF030N13+          GGTTATCATGTCAGAGATATTTCCAGTAAACATCAAGGGAACAGGTGGAAGTCTTGTAAC
                      ____________________________________________________________
consensus             GGTTATCATGTCAGAGATATTTCCAGTAAACATCAAGGGAACAGGTGGAAGTCTTGTAAC
 
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JMFN009A21-           ATTGAGCAACTGGTTTAGTTCATGGATTGTAACCTATGCCTTTAACTTCCTATTTCAGTG
rJMSF030N13+          ATTGAGCAACTGGTTTAGTTCATGGATTGTAACCTATGCCTTTAACTTCCTATTTCAGTG
                      ____________________________________________________________
consensus             ATTGAGCAACTGGTTTAGTTCATGGATTGTAACCTATGCCTTTAACTTCCTATTTCAGTG
 
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JMFN009A21-           GAGCTCAGCAGGTGTGTTTTTTGTATTTGCTTGTGTGTCTTCAAGTATCGTCATATTTGT
rJMSF030N13+          GAGCTCAGCAGGTGTGTTTTTTGTATTTGCTTGTGTGTCTGCAAGTATCGTCATATTTGT
                      ____________________________________________________________
consensus             GAGCTCAGCAGGTGTGTTTTTTGTATTTGCTTGTGTGTCTTCAAGTATCGTCATATTTGT
 
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JMFN009A21-           GGCGAAGTTGGTGCCAG                                           
rJMSF030N13+          GGCGAAGTTGGTGCCAGAGACCAAGGGACGAACACTGGAACAAATTCAAGCTTCAATGAC
                      ____________________________________________________________
consensus             GGCGAAGTTGGTGCCAGAGACCAAGGGACGAACACTGGAACAAATTCAAGCTTCAATGAC
 
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rJMSF030N13+          GTTGCTACAATAATCACCACCCATCATTGCATTCTTATATATATATGCTATATAGCTGCT
                      ____________________________________________________________
consensus             GTTGCTACAATAATCACCACCCATCATTGCATTCTTATATATATATGCTATATAGCTGCT
 
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rJMSF030N13+          TTTCTTGGAACAACACAACGTCCACATTCCAAACTATGCTACAATAATCACCAATCATGC
                      ____________________________________________________________
consensus             TTTCTTGGAACAACACAACGTCCACATTCCAAACTATGCTACAATAATCACCAATCATGC