Contig 010001:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009H22Sequence300000813 (5)ref|XP_009602385.1|2e-16PREDICTED: protein transport protein Sec31A [Nicotiana tomentosiformis]698010001 (4)ref|XP_011088124.1|5e-62PREDICTED: protein transport protein SEC31 homolog B [Sesamum indicum]
JMSF029K20Sequence651010001 (4)gb|KDO83288.1|3e-64hypothetical protein CISIN_1g0464512mg, partial [Citrus sinensis]
JMSF030E09Sequence672000813 (5)ref|XP_009790867.1|2e-56PREDICTED: protein transport protein Sec31A-like [Nicotiana sylvestris]747010001 (4)ref|XP_011088124.1|2e-68PREDICTED: protein transport protein SEC31 homolog B [Sesamum indicum]
JMSF032A22Sequence677000514 (4)ref|XP_006438926.1|1e-90hypothetical protein CICLE_v10030570mg [Citrus clementina] gb|ESR52166.1| hypoth682010001 (4)gb|KDO83288.1|9e-66hypothetical protein CISIN_1g0464512mg, partial [Citrus sinensis]

Alignment

This contig is upended


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rJMSF009H22+                                            CGGTTACAAATCCGGGAGTTCAAAGA
rJMSF030E09+                  TTCTCCAAATGTTAGGGGATTCGCCCCGGTTACAAATCCGGGAGTTCAAAGA
                      ____________________________________________________________
consensus                     TTCTCCAAATGTTAGGGGATTCGCCCCGGTTACAAATCCGGGAGTTCAAAGA
 
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rJMSF009H22+          CCTAATGTGAGTGCCATGCAACCTCCCAGCCCCANTCAAGCAGCACCTGTCCAACCACCT
rJMSF032A22+                                             TCAAGCAGCACCTGTCCAACCACCT
rJMSF030E09+          CCTAATGTGAGTGCCATGCAACCTCCCAGCCCCACTCAAGCAGCACCTGTCCAACCACCT
                      ____________________________________________________________
consensus             CCTAATGTGAGTGCCATGCAACCTCCCAGCCCCACTCAAGCAGCACCTGTCCAACCACCT
 
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rJMSF009H22+          GTAACTCCTGCTGTTCCCCCACCGACAGTGCAGACAGTCGATACCTNTAATGTGCCTGNT
rJMSF032A22+          GTAACTCCTGCTGTTCCCCCACCGACAGTGCAGACAGTCGATACCTCTAATGTGCCTGCT
rJMSF030E09+          GTAACTCCTGCTGTTCCCCCACCGACAGTGCAGACAGTCGATACCTCTAATGTGCCTGCT
rJMSF029K20+                   GCTGTTCCCCCACCGNCAGTGCAGACAGTCGATACNTGTAATGTGCCTGCT
                      ____________________________________________________________
consensus             GTAACTCCTGCTGTTCCCCCACCGACAGTGCAGACAGTCGATACCTCTAATGTGCCTGCT
 
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rJMSF009H22+          GAACAAAAACCTGTCATAGCAACATTGACTAGGCTCTTCAACGAGACATCAGAAGCATTA
rJMSF032A22+          GAACAAAAACCTGTCATAGCAACATTGACTAGGCTCTTCAACGAGACATCAGAAGCATTA
rJMSF030E09+          GAACAAAAACCTGTCATAGCAACATTGACTAGGCTCTTCAACGAGACATCAGAAGCATTA
rJMSF029K20+          GAACAAAAACCTGTCATAGCAACATTGACTAGGCTCTTCAACGAGACNTCAGAAGCATTA
                      ____________________________________________________________
consensus             GAACAAAAACCTGTCATAGCAACATTGACTAGGCTCTTCAACGAGACATCAGAAGCATTA
 
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rJMSF009H22+          GGAGGGCCACGGGCAAATCCAGCTAAGAAACGTGAGATTGATGATAATTCAAAGAAGCTA
rJMSF032A22+          GGAGGGCCACGGGCAAATCCAGCTAAGAAACGTGAGATTGATGATAATTCAAAGAAGCTA
rJMSF030E09+          GGAGGGCCACGGGCAAATCCAGCTAAGAAACGTGAGATTGATGATAATTCAAAGAAGCTA
rJMSF029K20+          GGAGGGCCACGGGCAANTCCAGCTAAGAAACGNGAGATTGATGATAATTCAANGAAGCTA
                      ____________________________________________________________
consensus             GGAGGGCCACGGGCAAATCCAGCTAAGAAACGTGAGATTGATGATAATTCAAAGAAGCTA
 
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rJMSF009H22+          GGTGCGTTGTTTGCTAAACTCAATGGTGGAGATATATCTAAGAACGCTTCAGAAAAGCTC
rJMSF032A22+          GGTGCGTTGTTTGCTAAACTCAATGGTGGAGATATATCTAAGAACGCTTCAGAAAAGCTC
rJMSF030E09+          GGTGCGTTGTTTGCTAAACTCAATGGTGGAGATATATCTAAGAACGCTTCAGAAAAGCTC
rJMSF029K20+          GGTGCGTTGTTTGCTAAACTCAATGGTGGAGATATATNTAAGAACGCTTCAGAAAAGCTC
                      ____________________________________________________________
consensus             GGTGCGTTGTTTGCTAAACTCAATGGTGGAGATATATCTAAGAACGCTTCAGAAAAGCTC
 
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rJMSF009H22+          GTCCAGCTTNGTCGGGCTTTGGACAACGGTGACTTCAGTACTGCCCTTCAGATCCAGGTG
rJMSF032A22+          GTCCAGCTTTGTCGGGCTTTGGACAACGGTGACTTCAGTACTGCCCTTCAGATCCAGGTG
rJMSF030E09+          GTCCAGCTTTGTCGGGCTTTGGACAACGGTGACTTCAGTACTGCCCTTCAGATCCAGGTG
rJMSF029K20+          GTCCAGCTTTGTCGGGCTNTGGACAACGGTGACTTCAGTACTGCCCTTCAGATCCAGGTG
                      ____________________________________________________________
consensus             GTCCAGCTTTGTCGGGCTTTGGACAACGGTGACTTCAGTACTGCCCTTCAGATCCAGGTG
 
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rJMSF009H22+          CTCTTGACGACAAGTGANTGGGACGAGTGCAACTTTTGGCTAGCGACGCTGAAGCGAATG
rJMSF032A22+          CTCTTGACGACAAGTGATTGGGACGAGTGCAACTTTTGGCTAGCGACGCTGAAGCGAATG
rJMSF030E09+          CTCTTGACGACAAGTGATTGGGACGAGTGCAACTTTTGGCTAGCGACGCTGAAGCGAATG
rJMSF029K20+          CTCTTGACGACAAGTGATTGGGACGAGTGCAACTTTTGGCTAGCGACGCTGAAGCGAATG
                      ____________________________________________________________
consensus             CTCTTGACGACAAGTGATTGGGACGAGTGCAACTTTTGGCTAGCGACGCTGAAGCGAATG
 
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rJMSF009H22+          ATCAAGACGAGGCAGAACTTTAGATAAACACGGTAAACTTCCCCAGACAAAATTTAGATT
rJMSF032A22+          ATCAAGACGAGGCAGAACTTTAGATAAACACGGTAAACTTCCCCAGACAAAATTTAGATT
rJMSF030E09+          ATCAAGACGAGGCAGAACTTTAGATAAACACGGTAAACTTCCCCAGACAAAATTTAGATT
rJMSF029K20+          ATCAAGACGAGGCAGAACTTTAGATAAACACGGTAAACTTCCCCAGACAAAATTTAGATT
                      ____________________________________________________________
consensus             ATCAAGACGAGGCAGAACTTTAGATAAACACGGTAAACTTCCCCAGACAAAATTTAGATT
 
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rJMSF009H22+          CTCTTACTTGAGTGTTTTCCAATCGTGGGTTCAATGGCCTCCGGCATACACGAGGATCAT
rJMSF032A22+          CTCTTACTTGAGTGTTTTCCAATCGTGGGTTCAATGGCCTCCGGCATACACGAGGATCAT
rJMSF030E09+          CTCTTACTTGAGTGTTTTCCAATCGTGGGTTCAATGGCCTCCGGCATACACGAGGATCAT
rJMSF029K20+          CTCTTACTTGAGTGTTTTCCAATCGTGGGTTCAATGGCCTCCGGCATACACGAGGATCAT
                      ____________________________________________________________
consensus             CTCTTACTTGAGTGTTTTCCAATCGTGGGTTCAATGGCCTCCGGCATACACGAGGATCAT
 
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rJMSF009H22+          CCAAACAGTTGAGAATTATATGGAATTCAGGTTTCTTTTTCTGTCAAACCATCTCCCCTA
rJMSF032A22+          CCAAACAGTTGAGAATTATATGGAATTCAGGTTTCTTTTTCTGTCAAACCATCTCCCCTA
rJMSF030E09+          CCAAACAGTTGAGAATTATATGGAATTCAGGTTTCTTTTTCTGTCAAACCATCTCCCCTA
rJMSF029K20+          CCAAACAGTTGAGAATTATATGGANTTCAGGTTTCTTTTTCNGTCAAACCATCTCCCCTA
                      ____________________________________________________________
consensus             CCAAACAGTTGAGAATTATATGGAATTCAGGTTTCTTTTTCTGTCAAACCATCTCCCCTA
 
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rJMSF009H22+          ATTCCCATAGAGGCAAAAGAGAATATAGTTCTCATAGACTATGCAAGACAGATTGGTCTT
rJMSF032A22+          ATTCCCATAGAGGCAAAAGAGAATATAGTTCTCATAGACTATGCAAGACAGATTGGTCTT
rJMSF030E09+          ATTCCCATAGAGGCAAAAGAGAATATAGTTCTCATAGACTATGCAAGACAGATTGGTCTT
rJMSF029K20+          ATTCCCATAGAGGCAAAAGAGAATATAGTTCTCNTAGACTATGCAAGACAGATTGGTCTT
                      ____________________________________________________________
consensus             ATTCCCATAGAGGCAAAAGAGAATATAGTTCTCATAGACTATGCAAGACAGATTGGTCTT
 
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rJMSF032A22+          TCCTTTAAACTTTGTAATGT                                        
rJMSF030E09+          TCCTTTAAACTTTGTAATGT                                        
rJMSF029K20+          TCCTTTAAACTTTGTAATGTTGAAATATAGACATTTTTGTTTCAAATAGATATAACACTT
                      ____________________________________________________________
consensus             TCCTTTAAACTTTGTAATGTTGAAATATAGACATTTTTGTTTCAAATAGATATAACACTT