Contig 009993:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS066D09Sequence628009993 (4)ref|XP_009764096.1|3e-99PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana sylvestris]
JMSF020M06Sequence674007279 (5)ref|XP_009594479.1|2e-79PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana tomentosiformis]771009993 (4)ref|XP_009764096.1|2e-114PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana sylvestris]
JMSF027F03Sequence660007279 (5)ref|XP_009594479.1|1e-77PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana tomentosiformis]780009993 (4)ref|XP_009764096.1|2e-112PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana sylvestris]
JMSF045C24Sequence663007279 (5)ref|XP_009594479.1|1e-77PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana tomentosiformis]773009993 (4)ref|XP_009764096.1|9e-119PREDICTED: long-chain-alcohol oxidase FAO2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS066D09-                                                                    GCA
                      ____________________________________________________________
consensus                                                                      GCA
 
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JMFS066D09-           AGAAAGAAATGCTTAGGAGTGATTGCGAAAAGCAAAGGTAACAACAAGATACTTCGTATT
                      ____________________________________________________________
consensus             AGAAAGAAATGCTTAGGAGTGATTGCGAAAAGCAAAGGTAACAACAAGATACTTCGTATT
 
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JMFS066D09-           GAAGCACGGGCAACAGTTTCAGCTTGCGGATCACTCTTTACACCGCCGCTGCTGATTTCC
                      ____________________________________________________________
consensus             GAAGCACGGGCAACAGTTTCAGCTTGCGGATCACTCTTTACACCGCCGCTGCTGATTTCC
 
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JMFS066D09-           AGTGGGTTGAAGAACAAAAACATTGGCAGCAACCTCCATCTCCACCCCGTCCTATTTGCG
                      ____________________________________________________________
consensus             AGTGGGTTGAAGAACAAAAACATTGGCAGCAACCTCCATCTCCACCCCGTCCTATTTGCG
 
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JMFS066D09-           TGGGGATACTTCCCAGAATCCATGGCAGAAATGGAAGGCAAAAACCACCAGGGAGGGATA
rJMSF045C24+                      CCAGAATCCATGGCAGAAATGGAAGGCAAAAACCACCAGGGAGGGATA
rJMSF020M06+                      CCAGAATCCATGGCAGAAATGGAAGGCAAAAACCACCAGGGAGGGATA
rJMSF027F03+                      CCAGAATCCNTGGCAGAAATGGAAGGCAAAANCCACCANGGAGGGATA
                      ____________________________________________________________
consensus             TGGGGATACTTCCCAGAATCCATGGCAGAAATGGAAGGCAAAAACCACCAGGGAGGGATA
 
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JMFS066D09-           ATCACCTCTATCCACAAGGTAGTCTCTGAAGGAACAAAACAAGCAGCCATTATAGAAGCT
rJMSF045C24+          ATCACCTCTATCCACAAGGTAGTCTCTGAAGGAACAAAACAAGCAGCCATTATAGAAGCT
rJMSF020M06+          ATCACCTCTATCCACAAGGTAGTCTCTGAAGGAACAAAACAAGCAGCCATTATAGAAGCT
rJMSF027F03+          ATCACCTCTATCCACAAGGTAGTCTCTGAAGGAACAAAACAAGCAGCCATTATAGAAGCT
                      ____________________________________________________________
consensus             ATCACCTCTATCCACAAGGTAGTCTCTGAAGGAACAAAACAAGCAGCCATTATAGAAGCT
 
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JMFS066D09-           GTCTCACTAGGACCTGCTGGATTTGCAGCTGTGTCTCCATGGACTTCAGGTCTTGACATG
rJMSF045C24+          GTCTCACTAGGACCTGCTGGATTTGCAGCTGTGTCTCCATGGACTTCAGGTCTTGACATG
rJMSF020M06+          GTCTCACTAGGACCTGCTGGATTTGCAGCTGTGTCTCCATGGACTTCAGGTCTTGACATG
rJMSF027F03+          GTCTCACTAGGACCTGCTGGATTTGCAGCTGTGTCTCCATGGACTTCAGGTCTTGACATG
                      ____________________________________________________________
consensus             GTCTCACTAGGACCTGCTGGATTTGCAGCTGTGTCTCCATGGACTTCAGGTCTTGACATG
 
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JMFS066D09-           AAGGAGAGGATGAGGAAATACTCCCGAACCGTGAACATATTCTCAATGGTCCGAGATCAT
rJMSF045C24+          AAGGAGAGGATGAGGAAATACTCCCGAACCGTGAACATATTCTCAATGGTCCGAGATCAT
rJMSF020M06+          AAGGAGAGGATGAGGAAATACTCCCGAACCGTGAACATATTCTCAATGGTCCGAGATCAT
rJMSF027F03+          AAGGAGAGGATGAGGAAATACTCCCGAACCGTGAACATATTCTCAATGGTCCGAGATCAT
                      ____________________________________________________________
consensus             AAGGAGAGGATGAGGAAATACTCCCGAACCGTGAACATATTCTCAATGGTCCGAGATCAT
 
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JMFS066D09-           GTCTCCGGCCAAGTGAAGAAGGCCGGGAGGATACAATACCGTATGGACCAGATTGACAAA
rJMSF045C24+          GGCTCCGGCCAAGTGAAGAAGGCCGGGAGGATACAATACCGTATGGACCAGATTGACAAA
rJMSF020M06+          GGCTCCGGCCAAGTGAAGAAGGCCGGGAGGATACAATACCGTATGGACCAGATTGACAAA
rJMSF027F03+          GGCTCCGGCCAAGTGAAGAAGGCCGGGAGGATACAATACCGTATGGACCAGATTGACAAA
                      ____________________________________________________________
consensus             GGCTCCGGCCAAGTGAAGAAGGCCGGGAGGATACAATACCGTATGGACCAGATTGACAAA
 
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JMFS066D09-           GACAACATCCGAACTGGTTTAAGACAAGCATTGAGGATACTGGTGGCAGCAGGGGCCGCT
rJMSF045C24+          GACAACATCCGAACTGGTTTAAGACAAGCATTGAGGATACTGGTGGCAGCAGGGGCCGCT
rJMSF020M06+          GACAACATCCGAACTGGTTTAAGACAAGCATTGAGGATACTGGTGGCAGCAGGGGCCGCT
rJMSF027F03+          GACAACATCCGAACTGGTTTAAGACAAGCATTGAGGATACTGGTGGCAGCAGGGGCCGCT
                      ____________________________________________________________
consensus             GACAACATCCGAACTGGTTTAAGACAAGCATTGAGGATACTGGTGGCAGCAGGGGCCGCT
 
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JMFS066D09-           GAAGTAGGCACGTTTCGAAGCGACGGCCAGAAAATCTGCTGCAAAGGAATCAAGACTGAN
rJMSF045C24+          GAAGTAGGCACGTTTCGAAGCGACGGCCAGAAAATCTGCTGCAAAGGAATCAAGACTGAG
rJMSF020M06+          GAAGTAGGCACGTTTCGAAGCGACGGCCAGAAAATCTGCTGCAAAGGAATCAAGACTGAG
rJMSF027F03+          GAAGTAGGCACGTTTCGAAGCGACGGCCAGAAAATCTGCTGCAAAGGAATCAAGACTGAG
                      ____________________________________________________________
consensus             GAAGTAGGCACGTTTCGAAGCGACGGCCAGAAAATCTGCTGCAAAGGAATCAAGACTGAG
 
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JMFS066D09-           GAGTTGGAGTCGTTTTTGGACGGAG                                   
rJMSF045C24+          GAGTTGGAGTCGTTTTTGGACGGAGTTGTTGCCACTGGAGGGCCAATGTCTGGAGAAGAA
rJMSF020M06+          GAGTTGGAGTCGTTTTTGGACGGAGTTGTTGCCACTGGAGGGCCAATGTCTGGAGAAGAA
rJMSF027F03+          GAGTTGGAGTCGTTTTTGGACGGAGTTGTTGCCACTGGAGGGCCAATGTCTGGAGAAGAA
                      ____________________________________________________________
consensus             GAGTTGGAGTCGTTTTTGGACGGAGTTGTTGCCACTGGAGGGCCAATGTCTGGAGAAGAA
 
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rJMSF045C24+          AACTGGACACTGTACTGTTCAGCACACCAGATGGGGAGTTGCAGAATGGGGGCTACTGAG
rJMSF020M06+          AACTGGACACTGTACTGTTCAGCACACCAGATGGGGAGTTGCAGAATGGGGGCTACTGAG
rJMSF027F03+          AACTGGACACTGTACTGTTCAGCACACCAGATGGGGAGTTGCAGAATGGGGGCTACTGAG
                      ____________________________________________________________
consensus             AACTGGACACTGTACTGTTCAGCACACCAGATGGGGAGTTGCAGAATGGGGGCTACTGAG
 
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rJMSF045C24+          GAAGATGGTGCAATTGACAACAATGGTGAGTGCTGGGAAGCTAAGGGACTGTATGTCTGC
rJMSF020M06+          GAAGATGGTGCAATTGACAACAATGGTGAGTGCTGGGAAGCTAAGGGACTGTATGTCTGC
rJMSF027F03+          GAAGATGGTGCAATTGACAACAATGGTGAGTGCTGGGAAGCTAAGGGACTGTATGTCTGC
                      ____________________________________________________________
consensus             GAAGATGGTGCAATTGACAACAATGGTGAGTGCTGGGAAGCTAAGGGACTGTATGTCTGC
 
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rJMSF045C24+          GATGGAAGTGTGCTTCCCAGTGCAATTGGTGTGAATCCCATGATCACCATCTTATCAACT
rJMSF020M06+          GATGGAAGTGTGCTTCCCAGTGCAATTGGTGTGAATCCCATGATCACCATCTTATCAACT
rJMSF027F03+          GATGGAAGTGTGCTTCCCAGTGCAATTGGTGTGAATCCCATGATCACCATCTTATCAACT
                      ____________________________________________________________
consensus             GATGGAAGTGTGCTTCCCAGTGCAATTGGTGTGAATCCCATGATCACCATCTTATCAACT
 
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rJMSF045C24+          GCCTATTGCATCTCAAATGGATTAGCCAAGTCGCTGAATA-GTGGAAAAGCATGAAATTT
rJMSF020M06+          GCCTATTGCATCTCAAATGGATTAGCCAAGTCGCTGAATATGTGGAAAAGCATGAAATTT
rJMSF027F03+          GCCTATTGCATCTCAAATGGATTAGCCAAGTCGCTGAATA-GTGGAAAAGCATGAAATTT
                      ____________________________________________________________
consensus             GCCTATTGCATCTCAAATGGATTAGCCAAGTCGCTGAATA-GTGGAAAAGCATGAAATTT
 
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rJMSF045C24+          GATGAAAAACATTCATCTCTATAATAAATCTATTGTC                       
rJMSF020M06+          GATGAAAAACATTCATCTCTATAATAAATCTATTGTCATTGTAACAACAAAAAAAAACA 
rJMSF027F03+          GATGAAAAACATTCATCTCTATAATAAATCTATTGTCATTGTAACAACAAAAAAAAACAA
                      ____________________________________________________________
consensus             GATGAAAAACATTCATCTCTATAATAAATCTATTGTCATTGTAACAACAAAAAAAAACAA