Contig 009990:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF017F10+                       TAATGACGTTTCTGAAACTGGCCATCCCTTCAGCCGCTATGCTTTGC
                      ____________________________________________________________
consensus                          TAATGACGTTTCTGAAACTGGCCATCCCTTCAGCCGCTATGCTTTGC
 
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rJMSF017F10+          TTGGAGTATTGGTCATTTGAGGTAATGGTTTTGTTAGCCGGCATTCTTCCAAATCCAGAA
rJMSF027D05+                                                            AAATCCAGAA
                      ____________________________________________________________
consensus             TTGGAGTATTGGTCATTTGAGGTAATGGTTTTGTTAGCCGGCATTCTTCCAAATCCAGAA
 
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rJMSF017F10+          CTTGAAGCATCTGCTGTTTCTATCACCCTTAATACATGTGCCATAGTGTATATGCTCCCT
rJMSF027D05+          CTTGAAGCATCTGCTGTTTCTATCACCCTTAATACATGTGCCATAGTGTATATGCTCCCT
                      ____________________________________________________________
consensus             CTTGAAGCATCTGCTGTTTCTATCACCCTTAATACATGTGCCATAGTGTATATGCTCCCT
 
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rJMSF017F10+          TTTGGCATTAGTGGCGCCCTAAGCATTAGAGTTTCAAACGAACTGGGAGGAGGAGACCCA
rJMSF027D05+          TTTGGCATTAGTGGCGCCCTAAGCATTAGAGTTTCAAACGAACTGGGAGGAGGAGACCCA
                      ____________________________________________________________
consensus             TTTGGCATTAGTGGCGCCCTAAGCATTAGAGTTTCAAACGAACTGGGAGGAGGAGACCCA
 
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rJMSF017F10+          GTGGCAGCCCGAAGAGCAGTATCAACCGGAATACTTGTGGTTATTGCAGAAGGGATTGTG
rJMSF027D05+          GTGGCAGCCCGAAGAGCAGTATCAACCGGAATACTTGTGGTTATTGCAGAAGGGATTGTG
                      ____________________________________________________________
consensus             GTGGCAGCCCGAAGAGCAGTATCAACCGGAATACTTGTGGTTATTGCAGAAGGGATTGTG
 
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rJMSF017F10+          GCAGCAACCCTAATGGTTTCAGTGCATAAAGTTTGGGGCTATTGTTACAGCACTGAGGAA
rJMSF027D05+          GCAGCAACCCTAATGGTTTCAGTGCATAAAGTTTGGGGCTATTGTTACAGCACTGAGGAA
                      ____________________________________________________________
consensus             GCAGCAACCCTAATGGTTTCAGTGCATAAAGTTTGGGGCTATTGTTACAGCACTGAGGAA
 
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rJMSF017F10+          GAAGTAGTGACATATGTTGGGCAGATGCTACTGTTGTTAGCAGGGTCGCATTTCTTGGAT
rJMSF027D05+          GAAGTAGTGACATATGTTGGGCAGATGCTACTGTTGTTAGCAGGGTCGCATTTCTTGGAT
                      ____________________________________________________________
consensus             GAAGTAGTGACATATGTTGGGCAGATGCTACTGTTGTTAGCAGGGTCGCATTTCTTGGAT
 
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rJMSF017F10+          GGCATTCAATGTGTGCTCTCAGGTGCTGCAAGAGGGTGTGGATGGCAACACATTGGGGCA
rJMSF027D05+          GGCATTCAATGTGTGCTCTCAGGTGCTGCAAGAGGGTGTGGATGGCAACACATTGGGGCA
                      ____________________________________________________________
consensus             GGCATTCAATGTGTGCTCTCAGGTGCTGCAAGAGGGTGTGGATGGCAACACATTGGGGCA
 
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rJMSF017F10+          ATCATCAATCTTGGAGCATATTATCTGGTTGGATTGCCTGCTGCTATATTCTTAGCATTT
rJMSF027D05+          ATCATCAATCTTGGAGCATATTATCTGGTTGGATTGCCTGCTGCTATATTCTTAGCATTT
                      ____________________________________________________________
consensus             ATCATCAATCTTGGAGCATATTATCTGGTTGGATTGCCTGCTGCTATATTCTTAGCATTT
 
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rJMSF017F10+          GTTCTCCATGTTGGAGGGAAGGGACTTTGGTTGGGAACCATGGTGGCTCTTTTTGTGCAA
rJMSF027D05+          GTTCTCCATGTTGGAGGGAAGGGACTTTGGTTGGGAACCATGGTGGCTCTTTTTGTGCAA
                      ____________________________________________________________
consensus             GTTCTCCATGTTGGAGGGAAGGGACTTTGGTTGGGAACCATGGTGGCTCTTTTTGTGCAA
 
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rJMSF017F10+          GCAATACTTCTTGGTATAGTAACCTGGAGAACAAATTGGGAGAAAGAGGCAATGAAGGCA
rJMSF027D05+          GCAATACTTCTTGGTATAGTAACCTGGAGAACAAATTGGGAGAAAGAGGCAATGAAGGCA
                      ____________________________________________________________
consensus             GCAATACTTCTTGGTATAGTAACCTGGAGAACAAATTGGGAGAAAGAGGCAATGAAGGCA
 
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rJMSF017F10+          GCTAATAGAGTGGGGGACAGCATGATCCCACATTAGTATTCACAAGTTAAAATGGAAACA
rJMSF027D05+          GCTAATAGAGTGGGGGACAGCATGATCCCACATTAGTATTCACAAGTTAAAATGGAAACA
                      ____________________________________________________________
consensus             GCTAATAGAGTGGGGGACAGCATGATCCCACATTAGTATTCACAAGTTAAAATGGAAACA
 
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rJMSF017F10+          AAATTTCGGATCCATCCTAAGTTTATTCCAAAGTAATGTTGTTGGCAATTTTGAACAGTT
rJMSF027D05+          AAATTTCGGATCCATCCTAAGTTTATTCCAAAGTAATGTTGTTGGCAATTTTGAACAGTT
                      ____________________________________________________________
consensus             AAATTTCGGATCCATCCTAAGTTTATTCCAAAGTAATGTTGTTGGCAATTTTGAACAGTT
 
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rJMSF027D05+          TGTTTGTGTTGCAAGTAACAGTACTGAATCTAAAGAGGATGCATGCATTCTTGGAGATAT
                      ____________________________________________________________
consensus             TGTTTGTGTTGCAAGTAACAGTACTGAATCTAAAGAGGATGCATGCATTCTTGGAGATAT