Contig 009988:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF038O12+                                    TTGCAGNCAATTTCATAGCTGATGACCCTGAAAA
                      ____________________________________________________________
consensus                                       TTGCAGNCAATTTCATAGCTGATGACCCTGAAAA
 
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rJMFF038O12+          GAGGCTTGATCTTCAAAAGCCAAGATTACNTAATGGGCAAACACCACCTGGTTTTCTTGG
rJMSF027A07+                                                                     G
                      ____________________________________________________________
consensus             GAGGCTTGATCTTCAAAAGCCAAGATTACNTAATGGGCAAACACCACCTGGTTTTCTTGG
 
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rJMFF038O12+          GTTTGCTGTAAATATGATTAATGTTGATAGCAATAATGTGTACTGTGTTACAAGCAGTGA
rJMSF027A07+          GTTTGCTGTAAATATGATTAATGTTGATAGCAATAATGTGTACTGTGTTACAANCAGTGA
                      ____________________________________________________________
consensus             GTTTGCTGTAAATATGATTAATGTTGATAGCAATAATGTGTACTGTGTTACAAGCAGTGA
 
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rJMFF038O12+          TTGTGGCCTAAGAGAGACTCTCTTCTATGCACTCTTTTCAAGCTTGCAAGTGTACAAAAC
rJMSF027A07+          TTGTGGCNTAAGAGAGACTCTCTTCTATGCACTCTTTTCAAGCTCGCAAGTGTNCAAAAC
                      ____________________________________________________________
consensus             TTGTGGCCTAAGAGAGACTCTCTTCTATGCACTCTTTTCAAGCTTGCAAGTGTACAAAAC
 
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rJMFF038O12+          AAGGGCAGAGATGCTACGGGCTCTGCCTTGTATAAACAATGGAGCCGTTTCTTTAGATGG
rJMSF027A07+          AAGGGCAGAGATGCTACGGGCTCTGCCTTGTATAAACAATGGAGCCGTTTCTTTAGATGG
                      ____________________________________________________________
consensus             AAGGGCAGAGATGCTACGGGCTCTGCCTTGTATAAACAATGGAGCCGTTTCTTTAGATGG
 
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rJMFF038O12+          TGGAATGATAAAACGCAATGGCATCTACTCCCTGGGCAATAGGGAAGTAGATGTGGAATT
rJMSF027A07+          TGGAATGATAAAACGCAATGGCATCTACTCCCTGGGCAATAGGGAAGTAGATGTGGAATT
                      ____________________________________________________________
consensus             TGGAATGATAAAACGCAATGGCATCTACTCCCTGGGCAATAGGGAAGTAGATGTGGAATT
 
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rJMFF038O12+          TCCAAAAACCATGGGAACTTTGATGCTGCCTGAGAGCTATGTTGACATTGAAAACAGATT
rJMSF027A07+          TCCAAAAACCATGGGAACTTTGATGCTGCCTGAGAGCTATGTTGACATTGAAAACAGATT
                      ____________________________________________________________
consensus             TCCAAAAACCATGGGAACTTTGATGCTGCCTGAGAGCTATGTTGACATTGAAAACAGATT
 
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rJMFF038O12+          AAAAGAGATGAGATGGAAGAAAGAAAGAGCCTTGGAAGACCTGCACAGAGAACAAGCATT
rJMSF027A07+          AAAAGAGATGAGATGGAAGAAAGAAAGAGCCTTGGAAGACCTGCACAGAGAACAAGCATT
                      ____________________________________________________________
consensus             AAAAGAGATGAGATGGAAGAAAGAAAGAGCCTTGGAAGACCTGCACAGAGAACAAGCATT
 
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rJMFF038O12+          GTTGGACTGTGCCAGGAAGAACTTTGAAGTAAATAGGCAAAAATTTCTCAAAACCCTTGT
rJMSF027A07+          GTTGGACTGTGCCAGGAAGAACTTTGAAGTAAATAGGCAAAAATTTCTCAAAACCCTTGT
                      ____________________________________________________________
consensus             GTTGGACTGTGCCAGGAAGAACTTTGAAGTAAATAGGCAAAAATTTCTCAAAACCCTTGT
 
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rJMFF038O12+          GGCGTGCTCATCCTACACAAATCTGA                                  
rJMSF027A07+          GGCGTGCTCATCCTACACAAATCTGAAGTTTTGGAAGTTACGTAAAATGAGTGTGAAAGA
                      ____________________________________________________________
consensus             GGCGTGCTCATCCTACACAAATCTGAAGTTTTGGAAGTTACGTAAAATGAGTGTGAAAGA
 
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rJMSF027A07+          TTATGAAATACTTAAGAAGGAGTCGGAAGTGAAGGCAAAAGAATATAAAATCCTTGTGAA
                      ____________________________________________________________
consensus             TTATGAAATACTTAAGAAGGAGTCGGAAGTGAAGGCAAAAGAATATAAAATCCTTGTGAA
 
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rJMSF027A07+          GGAGACTTCGACAATGACGGAGGAGCAGCTTAATGTTCATCTCTTTGTATGTGAAAAGAT
                      ____________________________________________________________
consensus             GGAGACTTCGACAATGACGGAGGAGCAGCTTAATGTTCATCTCTTTGTATGTGAAAAGAT
 
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rJMSF027A07+          TAAGAAGTATTGGGCAATGAAGAAGTAAATGACGGATTTTCATTTCTTTCAACTTGCAAT
                      ____________________________________________________________
consensus             TAAGAAGTATTGGGCAATGAAGAAGTAAATGACGGATTTTCATTTCTTTCAACTTGCAAT
 
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rJMSF027A07+          GTCTTNATACTTNGTATTTCATNTACTTCAACTTCTAGTGTTTTCAANTAATTTCGAATG
                      ____________________________________________________________
consensus             GTCTTNATACTTNGTATTTCATNTACTTCAACTTCTAGTGTTTTCAANTAATTTCGAATG