| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF005K07 | Sequence | 350 | 009987 (7) | ref|XP_011018650.1| | 5e-16 | PREDICTED: probable purine permease 11 isoform X2 [Populus euphratica] | 346 | 009987 (7) | ref|XP_009782583.1| | 3e-19 | PREDICTED: probable purine permease 9 [Nicotiana sylvestris] |
| JMSF012N19 | Sequence | 513 | 015698 | ref|XP_011018648.1| | 3e-14 | PREDICTED: probable purine permease 11 isoform X1 [Populus euphratica] ref|XP_01 | 671 | 009987 (7) | ref|XP_009782581.1| | 9e-41 | PREDICTED: probable purine permease 10 isoform X1 [Nicotiana sylvestris] |
| JMSF022M22 | Sequence | 693 | 009987 (7) | ref|XP_009782582.1| | 6e-31 | PREDICTED: probable purine permease 10 isoform X2 [Nicotiana sylvestris] | 670 | 009987 (7) | ref|XP_011096513.1| | 1e-52 | PREDICTED: probable purine permease 9 [Sesamum indicum] |
| JMSF026L04 | Sequence | 644 | 009987 (7) | ref|XP_009782582.1| | 1e-32 | PREDICTED: probable purine permease 10 isoform X2 [Nicotiana sylvestris] | 631 | 009987 (7) | ref|XP_009782583.1| | 6e-21 | PREDICTED: probable purine permease 9 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF022M22- GAGCTATCTAGTAAA
____________________________________________________________
consensus GAGCTATCTAGTAAA
. : . : . : . : . : . :
JMSF022M22- AGGGGTATCTGAGAGTTCCATATGGGTGAACATCTCCAGAGATTGCTGGATAACACAAGT
____________________________________________________________
consensus AGGGGTATCTGAGAGTTCCATATGGGTGAACATCTCCAGAGATTGCTGGATAACACAAGT
. : . : . : . : . : . :
JMSF022M22- AAGTTCCTCAACTACATCTTAATTACCTTTTGTTTCTTTTATAAATCTGGTAAAATTAAA
____________________________________________________________
consensus AAGTTCCTCAACTACATCTTAATTACCTTTTGTTTCTTTTATAAATCTGGTAAAATTAAA
. : . : . : . : . : . :
JMSF005K07- GTTATGAAGCTGTGGAATTTGGGGGTGAAATA
JMSF022M22- GGGGCATATTTGTATGTTTGAGCTGCAGGTTATGAAGCTGTGGAATTTGGGGGTGAAATA
JMSF026L04- GTTATGAAGCTGTGGAATTTGGGGGTGAAATA
____________________________________________________________
consensus GGGGCATATTTGTATGTTTGAGCTGCAGGTTATGAAGCTGTGGAATTTGGGGGTGAAATA
. : . : . : . : . : . :
JMSF005K07- ATCAAAGTTTCTAAATCTACTGATTCATCATCGATTAATGTCAACTGGAAATGGTGGTTT
JMSF022M22- ATCAAAGTTTCTAAATCTACTGATTCATCATCGATTAATGTCAACTGGAAATGGTGGTTT
JMSF026L04- ATCAAAGTTTCTAAATCTACTGATTCATCATCGATTAATGTCAACTGGAAATGGTGGTTT
____________________________________________________________
consensus ATCAAAGTTTCTAAATCTACTGATTCATCATCGATTAATGTCAACTGGAAATGGTGGTTT
. : . : . : . : . : . :
JMSF005K07- GAGTTAGCTTTCTATACAGTTGTGACCTTATCAGGCTTAGAAGCTTCTATTCTCTTGTCA
JMSF022M22- GAGTTAGCTTTCTATACAGTTGTGACCTTATCAGGCTTAGAAGCTTCTATTCTCTTGTCA
JMSF026L04- GAGTTAGCTTTCTATACAGTTGTGACCTTATCAGGCTTAGAAGCTTCTATTCTCTTGTCA
____________________________________________________________
consensus GAGTTAGCTTTCTATACAGTTGTGACCTTATCAGGCTTAGAAGCTTCTATTCTCTTGTCA
. : . : . : . : . : . :
JMSF005K07- AGAATTTACTATGACCAAGGAGGTAACAGCAAATGGCTCATGGCTTCAATCCAAACTGCA
JMSF022M22- AGAATTTACTATGACCAAGGAGGTAACAGCAAATGGCTCATGGCTTCAATCCAAACTGCA
JMSF026L04- AGAATTTACTATGACCAAGGAGGTAACAGCAAATGGCTCATGGCTTCAATCCAAACTGCA
____________________________________________________________
consensus AGAATTTACTATGACCAAGGAGGTAACAGCAAATGGCTCATGGCTTCAATCCAAACTGCA
. : . : . : . : . : . :
JMSF005K07- GGCTTCCCCTTTCTCATCCCCTTTCTCTTCTTCTCCAAAACTCATCCTAATTCTTCTACT
JMSF022M22- GGCTTCCCCTTTCTCATCCCCTTTCTCTTCTTCTCCAAAACTCATCCTAATTCTTCTACT
JMSF026L04- GGCTTCCCCTTTCTCATCCCCTTTCTCTTCTTCTCCAAAACTCATCCTAATTCTTCTACT
____________________________________________________________
consensus GGCTTCCCCTTTCTCATCCCCTTTCTCTTCTTCTCCAAAACTCATCCTAATTCTTCTACT
. : . : . : . : . : . :
JMSF005K07- TCAGA
JMSF022M22- TCAGACCCACCAAGCCCACCTTCTTTTCTGGTTCTGGCTTTAGTTTCCACTGTTCTTGGT
JMSF026L04- TCAGACCCACCAAGCCCACCTTCTTTTCTGGTTCTGGCTTTAGTTTCCACTGTTCTTGGT
____________________________________________________________
consensus TCAGACCCACCAAGCCCACCTTCTTTTCTGGTTCTGGCTTTAGTTTCCACTGTTCTTGGT
. : . : . : . : . : . :
JMSF022M22- TTGCTCTTAGCAGCAACTGATGTTTTCTATTCACTTGCCATAGAATACCTCCCTGCCTCT
JMSF026L04- TTGCTCTTAGCAGCAACTGATGTTTTCTATTCACTTGCCATAGAATACCTCCCTGCCTCT
____________________________________________________________
consensus TTGCTCTTAGCAGCAACTGATGTTTTCTATTCACTTGCCATAGAATACCTCCCTGCCTCT
. : . : . : . : . : . :
JMSF022M22- ACTTATTCTCTTCTTAACTCATCCCAGTTAGCCTTCACTGCCCTTTTCTCTTTTCTCCTT
JMSF026L04- ACTTATTCTCTTCTTAACTCATCCCAGTTAGCCTTCACTGCCCTTTTCTCTTTTCTCCTT
____________________________________________________________
consensus ACTTATTCTCTTCTTAACTCATCCCAGTTAGCCTTCACTGCCCTTTTCTCTTTTCTCCTT
. : . : . : . : . : . :
JMSF022M22- AATGCTCAAAGCTTCACCCCTTACATAATCAACGCCGTCATACTTCTCACCTTCTCCCCT
JMSF026L04- AATGCTCAAAGCTTCACCCCTTACATAATCAACGCCGTCATACTTCTCACCTTCTCCCCT
rJMSF022M22+ CTCAAAGCTTCACCCCTTACATAATCAACGCCGTCATACTTCTCACCTTCTCCCCT
____________________________________________________________
consensus AATGCTCAAAGCTTCACCCCTTACATAATCAACGCCGTCATACTTCTCACCTTCTCCCCT
. : . : . : . : . : . :
JMSF022M22- ATGCTCCTCAT
JMSF026L04- ATGCTCCTCATCTTCAGCCCAGACATGACATCATCGTCCGAGGTAGCCT
rJMSF022M22+ ATGCTCCTCATNTTCAGCCCAGACATGACATCATCGTCCGAGGTAGCCTNTAAGGATGAG
rJMSF012N19+ TCAGCCCAGACATGACATCATCGTCCGAGGTAGCCTCTAAGGATGAG
____________________________________________________________
consensus ATGCTCCTCATCTTCAGCCCAGACATGACATCATCGTCCGAGGTAGCCTCTAAGGATGAG
. : . : . : . : . : . :
rJMSF022M22+ TACATGTTGGGGGTTTTGTTCACAATCGCCGCGTNTGCTTGCCCTGCACTCCTNTTCTCC
rJMSF012N19+ TACATGTTGGGGGTTTTGTTCACNATCGCCGCGTNTGCTTGCCCTGCACTCCTTTTCTCC
rJMSF026L04+ CGCGTNTGCTTGCCCTGCACTCCTTTTCTCC
____________________________________________________________
consensus TACATGTTGGGGGTTTTGTTCACAATCGCCGCGTNTGCTTGCCCTGCACTCCTTTTCTCC
. : . : . : . : . : . :
rJMSF022M22+ CTAACCCAACTNGTATTCCAGAAGATCATCAAAAGGGAAACCGTAAAAGACNCGGTGATT
rJMSF012N19+ CTAACCCAACTNGTATTCCNGAAGATCNTCAAAAGGGAAACCGTAAAAGACNCGGTGATT
rJMSF026L04+ CTAACCCNACTNGTATTCCCGAAGNTCNTCNAAAGGGAAACCGTAAAAGNCCCGGTGATT
____________________________________________________________
consensus CTAACCCAACTNGTATTCCCGAAGATCATCAAAAGGGAAACCGTAAAAGACCCGGTGATT
. : . : . : . : . : . :
rJMSF022M22+ CTCACGGTTTTACAGTCTTTTGTGGCCNCGGTTGTGACCCTTGTGGGGCTGTTTGCCAGT
rJMSF012N19+ CTCNCGGTTTTACAGTCTTTTGTGGCCNCGGTTGTGACCCTTGTGGGGCCGTTTGCCNGT
rJMSF026L04+ CNCCCGGTTTTACCGTNTTTTGTGGCCCCGGTTGTGACCCNTGNGGGGCNGTTTGCCCGT
____________________________________________________________
consensus CTCCCGGTTTTACAGTCTTTTGTGGCCCCGGTTGTGACCCTTGTGGGGCTGTTTGCCCGT
. : . : . : . : . : . :
rJMSF022M22+ GGGGAGTGGAAGGGTNTGAGAAGAGAAATGGAGGATTACAAGCAAGGGGNGTTAGCCTAC
rJMSF012N19+ GGGGAGTGGAAGGGTNTGAGAAGAGAAATGGAGGATTNCAAGCAAGGGGNGTTAGCCTAC
rJMSF026L04+ GGGGAGTGGAAGGGTNTGAGAAGAGAAATGGNGGNTTACCAGCNAGGGGNGTTAGCCTAC
____________________________________________________________
consensus GGGGAGTGGAAGGGTNTGAGAAGAGAAATGGAGGATTACAAGCAAGGGGNGTTAGCCTAC
. : . : . : . : . : . :
rJMSF022M22+ AATCTGGTCTTGTTTTTTACTGCTGTTGCATCCCNGGCTTACTTTGTTGGCTCTTTTACC
rJMSF005K07+ TTACTTTGTTGGCTCTTTTACC
rJMSF012N19+ AATCNGGTCTTGTTTTTTACTGCTGTTGCATCCCNGGCTTACTTTGTTGGCTCTTTTACC
rJMSF026L04+ NATCTGGTCTTGTTTTTTACTGCTGNTGCNTCCCCGGCTTACTTTGTTGGCTCTTTTACC
____________________________________________________________
consensus AATCTGGTCTTGTTTTTTACTGCTGTTGCATCCCCGGCTTACTTTGTTGGCTCTTTTACC
. : . : . : . : . : . :
rJMSF022M22+ NTGACTTTTAAGGTTTNTTCCTTGTTTTCTAACGNTGTTATAAGGTTGGCCNCTCCTNTG
rJMSF005K07+ TTGACTTTTAAGGTTTCTTCCTTGTTTTCTAACGTTGTTATAAGGTTGGCCNCTCCTCTG
rJMSF012N19+ NTGNCTTTTAAGGTTTNTTCCTTGTTTTCTAACGTTGTTATAAGGTTGGCCNCTCCTNNG
rJMSF026L04+ NTGACNTTTAAGGTTTNTTCCNTGTTTTCNAACGNTGTTATAAGGTTGGCCCCTCCTNTG
____________________________________________________________
consensus TTGACTTTTAAGGTTTCTTCCTTGTTTTCTAACGTTGTTATAAGGTTGGCCCCTCCTCTG
. : . : . : . : . : . :
rJMSF022M22+ ACTCCNTTGCTGTCCATGTTGTTCTTGAATGAAGAGATGAGTGGGTTGAAGGTAANGTCC
rJMSF005K07+ ACTCCNNTGCNGTCCATGTTGTTCTTGAATGAAGAGATGAGTGGGTTGAAGGTAATGTCC
rJMSF012N19+ ACTCCNTTGCNGTCCATGTTGTTCTTGAATGAAGAGATGAGTGGGTTGAAGGTAANGTCC
rJMSF026L04+ ACTCCCNTGCNGTCCCTGTTGTTCNTGAANGAAGAGATGAGTGGGTTGAAGGTAANGTCC
____________________________________________________________
consensus ACTCCCTTGCTGTCCATGTTGTTCTTGAATGAAGAGATGAGTGGGTTGAAGGTAATGTCC
. : . : . : . : . : . :
rJMSF022M22+ NTGCTGTTGTCTGTCTGGGGATTTGCTTCTTATATTTACCAACAATATCTTGATGATTTG
rJMSF005K07+ NTGCTGTTGTCTGTCTGGGGATTTGCTTCTTATATTTACCAACAATATCTTGATGATTTG
rJMSF012N19+ NTGCNGTTGTCTGTCTGGGGATTTGCTTCTTATATTTACCAACAATATCTTGATGATTTG
rJMSF026L04+ CTGCNGTTGTCNGTCTGGGGATTTGCTTNTTATATTTACCNACNANATCNTGATGATTTG
____________________________________________________________
consensus CTGCTGTTGTCTGTCTGGGGATTTGCTTCTTATATTTACCAACAATATCTTGATGATTTG
. : . : . : . : . : . :
rJMSF022M22+ GAAGGGCTACCTACTAAAGAGATATCAGATCTCAAAACTTTAGATTAATTGGG
rJMSF005K07+ GAAGGGCTACCTACTAAAGAGATATCAGATCTCAAAACNTTAGATTAATTGGGTTGTTGT
rJMSF012N19+ GAAGGGCTACCTACTAAAGAGATATCNGATCTCAAAACTTTAGATTAATTGGGTTGNTGN
rJMSF026L04+ GAAGGGCTACCTACTAAAGNGATATCNGATCTCNAAACNTTAGNTTAATTGGGNTGTTGT
____________________________________________________________
consensus GAAGGGCTACCTACTAAAGAGATATCAGATCTCAAAACTTTAGATTAATTGGGTTGTTGT
. : . : . : . : . : . :
rJMSF005K07+ AAAG-AAAAAAAAAAATTAAATATATTGCTAGATTGTTAATGGATGAATGGATTTATTGT
rJMSF012N19+ AAAG-AAAAAAAAAAATTAAATATATTGCTAGATTGTTAATGGATGAATGGATTTATTGT
rJMSF026L04+ AAAGAAAAAAAAAAAATTAAATATATTGCTAGATTGTTAATGGATGAATGGATTTATTGT
____________________________________________________________
consensus AAAG-AAAAAAAAAAATTAAATATATTGCTAGATTGTTAATGGATGAATGGATTTATTGT
. : . : . : . : . : . :
rJMSF005K07+ TTTAATATTTCCTTT
rJMSF012N19+ TTTAATATTTCCTTT
rJMSF026L04+ TTTAATATTTCCTTTTAAAAGTCGCATGTAACAAATTTTGTAAATATACTGTAACCATAA
____________________________________________________________
consensus TTTAATATTTCCTTTTAAAAGTCGCATGTAACAAATTTTGTAAATATACTGTAACCATAA