Contig 009986:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026J20Sequence616009986 (2)gb|ABL59970.1|9e-29lectin [Nicotiana tabacum]729009986 (2)gb|EYU36716.1|1e-29hypothetical protein MIMGU_mgv1a015189mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF026J20- GGACGACCT
rJMSF026J20+ GGACGACCT
                      ____________________________________________________________
consensus GGACGACCT
 
. : . : . : . : . : . :
JMSF026J20- GTGAAGTTGAAAGCGTCTGCCATGGTTTGACAAGCCTTTGGTTTGAAGCAAAGGAGCTAA
rJMSF026J20+ GTGAAGTTGAAAGCGTCTGCCATGGTTTGACAAGCCTTTGGTTTGAAGCAAAGGAGCTAA
                      ____________________________________________________________
consensus GTGAAGTTGAAAGCGTCTGCCATGGTTTGACAAGCCTTTGGTTTGAAGCAAAGGAGCTAA
 
. : . : . : . : . : . :
JMSF026J20- GGATCACCTGGGGTCATGATCCTACGTATTGGATTTGGACATCTGACTTCGGCACCGAGC
rJMSF026J20+ GGATCACCTGGGGTCATGATCCTACGTATTGGATTTGGACATCTGACTTCGGCACCGAGC
                      ____________________________________________________________
consensus GGATCACCTGGGGTCATGATCCTACGTATTGGATTTGGACATCTGACTTCGGCACCGAGC
 
. : . : . : . : . : . :
JMSF026J20- ATGAGGTTGCGAAGCTGGAGAAAGTTAGCGCATTCGATATCGGATTATCGTTTGACATTC
rJMSF026J20+ ATGAGGTTGCGAAGCTGGAGAAAGTTAGCGCATTCGATATCGGATTATCGTTTGACATTC
                      ____________________________________________________________
consensus ATGAGGTTGCGAAGCTGGAGAAAGTTAGCGCATTCGATATCGGATTATCGTTTGACATTC
 
. : . : . : . : . : . :
JMSF026J20- GGTGCTTATATAAGATGAGTTGTTACTCTGCCTATCTTGTGTTCAAGCTTGAAGAGAGTG
rJMSF026J20+ GGTGCTTATATAAGATGAGTTGTTACTCTGCCTATCTTGTGTTCAAGCTTGAAGAGAGTG
                      ____________________________________________________________
consensus GGTGCTTATATAAGATGAGTTGTTACTCTGCCTATCTTGTGTTCAAGCTTGAAGAGAGTG
 
. : . : . : . : . : . :
JMSF026J20- GAAACTTTCAAGATGTTTATACAGCATTGGCAGCTGTGAGATATGAGAAGGACAACGCCA
rJMSF026J20+ GAAACTTTCAAGATGTTTATACAGCATTGGCAGCTGTGAGATATGAGAAGGACAACGCCA
                      ____________________________________________________________
consensus GAAACTTTCAAGATGTTTATACAGCATTGGCAGCTGTGAGATATGAGAAGGACAACGCCA
 
. : . : . : . : . : . :
JMSF026J20- GATACGGCTGGATGCATAAACAGAATTGGCACACTGATACATATGAATATCCTGATCCGG
rJMSF026J20+ GATACGGCTGGATGCATAAACAGAATTGGCACACTGATACATATGAATATCCTGATCCGG
                      ____________________________________________________________
consensus GATACGGCTGGATGCATAAACAGAATTGGCACACTGATACATATGAATATCCTGATCCGG
 
. : . : . : . : . : . :
JMSF026J20- AGAAGATGGAAAGTGTAAGAGTGGAGGGAGGAAATCATAATATTATTACGGTCTTTCTAG
rJMSF026J20+ AGAAGATGGAAAGTGTAAGAGTGGAGGGAGGAAATCATAATATTATTACGGTCTTTCTAG
                      ____________________________________________________________
consensus AGAAGATGGAAAGTGTAAGAGTGGAGGGAGGAAATCATAATATTATTACGGTCTTTCTAG
 
. : . : . : . : . : . :
JMSF026J20- CAAAGACAAAGTCTTATGGAGATTGCGGTCAGTTTCCCAATAGTCGTTCTGATGGGTGGA
rJMSF026J20+ CAAAGACAAAGTCTTATGGAGATTGCGGTCAGTTTCCCAATAGTCGTTCTGATGGGTGGA
                      ____________________________________________________________
consensus CAAAGACAAAGTCTTATGGAGATTGCGGTCAGTTTCCCAATAGTCGTTCTGATGGGTGGA
 
. : . : . : . : . : . :
JMSF026J20- TGGAAATCAAGCTCGGAGACTTTTACGTTTGTAATGGGAATGAGGGTGAGGTTCAATTAC
rJMSF026J20+ TGGAAATCAAGCTCGGAGACTTTTACGTTTGTAATGGGAATGAGGGTGAGGTTCAATTAC
                      ____________________________________________________________
consensus TGGAAATCAAGCTCGGAGACTTTTACGTTTGTAATGGGAATGAGGGTGAGGTTCAATTAC
 
. : . : . : . : . : . :
JMSF026J20- GACTGTGGCATACATCAAATCAGTATTGGAAGTCTGGTTTTGTTGTTAGGGGCGTTGAAA
rJMSF026J20+ GACTGTGGCATACATCAAATCAGTATTGGAAGTCTGGTTTTGTTGTTAGGGGCGTTGAAA
                      ____________________________________________________________
consensus GACTGTGGCATACATCAAATCAGTATTGGAAGTCTGGTTTTGTTGTTAGGGGCGTTGAAA
 
. : . : . : . : . : . :
JMSF026J20- TTCGGCC
rJMSF026J20+ TTCGGCCAGCAAACTAAGGATTGTTTTTTGCATTTTTATTTCGGTTTGTTTTAGTCTATG
                      ____________________________________________________________
consensus TTCGGCCAGCAAACTAAGGATTGTTTTTTGCATTTTTATTTCGGTTTGTTTTAGTCTATG
 
. : . : . : . : . : . :
rJMSF026J20+ TGTGTTGTAATATATACTTGTGTTGATGCTCTAAGTGGCTGTGATGTATTTTTACAATTT
                      ____________________________________________________________
consensus TGTGTTGTAATATATACTTGTGTTGATGCTCTAAGTGGCTGTGATGTATTTTTACAATTT