clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF017P02 | Sequence | 616 | 007889 (7) | ref|XP_004234000.1| | 263 | PREDICTED: uncharacterized protein LOC101250276 [Solanum lycopersicum] | 785 | 009984 (7) | ref|XP_009603102.1| | 227 | PREDICTED: uncharacterized protein LOC104098140 [Nicotiana tomentosiformis] |
JMFF022H23 | Sequence | 501 | 007889 (7) | ref|XP_008231134.1| | 202 | PREDICTED: uncharacterized protein LOC103330348 [Prunus mume] | 773 | 009984 (7) | ref|XP_009603102.1| | 223 | PREDICTED: uncharacterized protein LOC104098140 [Nicotiana tomentosiformis] |
JMFF027D05 | Sequence | 555 | 007889 (7) | ref|XP_008231134.1| | 228 | PREDICTED: uncharacterized protein LOC103330348 [Prunus mume] | 609 | 009984 (7) | ref|XP_009603102.1| | 142 | PREDICTED: uncharacterized protein LOC104098140 [Nicotiana tomentosiformis] |
JMSF010A13 | Sequence | 215 | 007889 (7) | 678 | 009984 (7) | ref|XP_010660766.1| | 2e-51 | PREDICTED: uncharacterized protein LOC100265277 isoform X2 [Vitis vinifera] | |||
JMSF020P05 | Sequence | 649 | 007889 (7) | ref|XP_004234000.1| | 282 | PREDICTED: uncharacterized protein LOC101250276 [Solanum lycopersicum] | 789 | 009984 (7) | ref|XP_009603102.1| | 234 | PREDICTED: uncharacterized protein LOC104098140 [Nicotiana tomentosiformis] |
JMSF023J21 | Sequence | 662 | 007889 (7) | ref|XP_004234000.1| | 260 | PREDICTED: uncharacterized protein LOC101250276 [Solanum lycopersicum] | 735 | 009984 (7) | ref|XP_009603102.1| | 262 | PREDICTED: uncharacterized protein LOC104098140 [Nicotiana tomentosiformis] |
JMSF026A02 | Sequence | 630 | 007889 (7) | ref|XP_008231134.1| | 199 | PREDICTED: uncharacterized protein LOC103330348 [Prunus mume] | 730 | 009984 (7) | ref|XP_009603102.1| | 155 | PREDICTED: uncharacterized protein LOC104098140 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF023J21+ GGC
____________________________________________________________
consensus GGC
. : . : . : . : . : . :
rJMSF023J21+ ATCAACAAGGAAATGCAGTTCAGTTAAATGTGTAGAGGTCAACAAAGAATCAAAGCATTC
rJMSF020P05+ AATGCAGNTCAGTTAAATGTGTAGA-GTCACCAANGAATCAAAGCNTTC
____________________________________________________________
consensus ATCAACAAGGAAATGCAGTTCAGTTAAATGTGTAGAGGTCACCAAAGAATCAAAGCATTC
. : . : . : . : . : . :
rJMSF023J21+ TTTTACAAAGACAGCTGAGCGCTTGCCAACCAATCTTGATAGCAGCATTAGCTGGCATCA
rJMSF020P05+ TTTTACAAAGACAGCTGAGCGCTTGCCAACCAATCTTGATAGCAGCATTAGCTGGCATCA
rJMFF022H23+ CTGAGCGCTTGCCAACCAATCTTGATAGCAGCATTAGCTGGCATCA
rJMFF017P02+ CAAAGACAGCTGAGCGCTTGCCAACCAATCTTGATAGCAGCATTAGCTGGCATCA
____________________________________________________________
consensus TTTTACAAAGACAGCTGAGCGCTTGCCAACCAATCTTGATAGCAGCATTAGCTGGCATCA
. : . : . : . : . : . :
rJMSF023J21+ TGCAGACACTTCAATTGAACCACTTTCTTGGCTTGTTGGATCTGATGTTGTTGTGGTTGA
rJMSF020P05+ TGCAGACACTTCAATTGAACCACTTTCTTGGCTTGTTGGATCTGATGTTGTTGTGGTTGA
rJMSF010A13+ CTTGGCTTGTTGGATCTGATGTTGTTGTGGTTGA
rJMFF022H23+ TGCAGACACTTCAATTGAACCACTTTCTTGGCTTGTTGGATCTGATGTTGTTGTGGTTGA
rJMFF017P02+ TGCAGACACTTCAATTGAACCACTTTCTTGGCTTGTTGGATCTGATGTTGTTGTGGTTGA
____________________________________________________________
consensus TGCAGACACTTCAATTGAACCACTTTCTTGGCTTGTTGGATCTGATGTTGTTGTGGTTGA
. : . : . : . : . : . :
rJMSF023J21+ CCCTCCGAGGAAGGGACTGGATCCATCTCTGATTAAGGCATTACAGACTGTGTCATACAA
rJMSF020P05+ CCCTCCGAGGAAGGGACTGGATCCATCTCTGATTAAGGCATTACAGACTGTGTCATACAA
rJMSF010A13+ CCCTCCGAGGAAGGGACTGGATCCATCTCTGATTAAGGCATTACAGACTGTGTCATACAA
rJMFF027D05+ TGATTAAGGCATTACAGACTGNGTCATACAA
rJMFF022H23+ CCCTCCGAGGAAGGGACTGGATCCATCTCTGATTAAGGCATTACAGACTGTGTCATACAA
rJMFF017P02+ CCCTCCGAGGAAGGGACTGGATCCATCTCTGATTAAGGCATTACAGACTGTGTCATACAA
____________________________________________________________
consensus CCCTCCGAGGAAGGGACTGGATCCATCTCTGATTAAGGCATTACAGACTGTGTCATACAA
. : . : . : . : . : . :
rJMSF023J21+ AAGCAAAAAATCTGAGAGTAATGAAAAGGCAAAAGATGAAAAAAGACCTTGGGTTCTACG
rJMSF020P05+ AAGCAAAAAATCTGAGAGTAATGAAAAGGCAAAAGATGAAAAAAGACCTTGGGTTCTACG
rJMSF010A13+ AAGCAAAAAATCTGAGAGTAATGAAAAGGCAAAAGATGAAAAAAGACCTTGGGTTCTACG
rJMFF027D05+ AAGCAAAAAATCTGAGAGTAATGAAAAGGCAAAAGATGAAAAAAGACNTTGGGTTCTACG
rJMFF022H23+ AAGCAAAAAATCTGAGAGTAATGAAAAGGCAAAAGATGAAAAAAGACCTTGGGTTCTACG
rJMFF017P02+ AAGCAAAAAATCTGAGAGTAATGAAAAGGCAAAAGATGAAAAAAGACCTTGGGTTCTACG
rJMSF026A02+ AGTAATGAAAAGGCAAAAGATGAAAAAAGACCTTGGGTTCTACG
____________________________________________________________
consensus AAGCAAAAAATCTGAGAGTAATGAAAAGGCAAAAGATGAAAAAAGACCTTGGGTTCTACG
. : . : . : . : . : . :
rJMSF023J21+ TGCAAGAGAAGCTTCAGTTCTGATTAGAGAGAAAACTGAGTATGAGGAAAACCAATCTTT
rJMSF020P05+ TGCAAGAGAAGCTTCAGTTCTGATTAGAGAGAAAACTGAGTATGAGGAAAACCAATCTTT
rJMSF010A13+ TGCAAGAGAAGCTTCAGTTCTGATTAGAGAGAAAACTGAGTATGAGGAAAACCAATCTTT
rJMFF027D05+ TGCAAGAGAAGCTTCAGTTCTGATTAGAGAGAAAACTGAGTATGAGGAAAACCAATCTTT
rJMFF022H23+ TGCAAGAGAAGCTTCAGTTCTGATTAGAGAGAAAACTGAGTATGAGGAAAACCAATCTTT
rJMFF017P02+ TGCAAGAGAAGCTTCAGTTCTGATTAGAGAGAAAACTGAGTATGAGGAAAACCAATCTTT
rJMSF026A02+ TGCAAGAGAAGCTTCAGTTCTGATTAGAGAGAAAACTGAGTATGAGGAAAACCAATCTTT
____________________________________________________________
consensus TGCAAGAGAAGCTTCAGTTCTGATTAGAGAGAAAACTGAGTATGAGGAAAACCAATCTTT
. : . : . : . : . : . :
rJMSF023J21+ GCCTCAAACTCTCATCTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGATTGCATGTC
rJMSF020P05+ GCCTCAAACTCTCATCTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGATTGCATGTC
rJMSF010A13+ GCCTCAAACTCTCATCTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGATTGCATGTC
rJMFF027D05+ GCCTCAAACTCTCATCTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGATTGCATGTC
rJMFF022H23+ GCCTCAAACTCTCATCTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGATTGCATGTC
rJMFF017P02+ GCCTCAAACTCTCATCTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGATTGCATGTC
rJMSF026A02+ GCCTCAAACTCTCATCTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGATTGCATGTC
____________________________________________________________
consensus GCCTCAAACTCTCATCTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGATTGCATGTC
. : . : . : . : . : . :
rJMSF023J21+ ACTTGTGTCTTCCAAGGCATGGCATTTATCAAAGGCCCATGGCTTTAATTTCTTCCCAGG
rJMSF020P05+ ACTTGTGTCTTCCAAGGCATGGCATTTATCAAAGGCCCATGGCTTTAATTTCTTCCCATG
rJMSF010A13+ ACTTGTGTCTTCCAAGGCATGGCATTTATCAAAGGCCCATGGCTTTAATTTCTTCCCAGG
rJMFF027D05+ ACTTGTGTCTTCCAAGGCATGGCATTTATCAAAGGCCCATGGCTTTAATTTCTTCCCAGG
rJMFF022H23+ ACTTGTGTCTTCCAAGGCATGGCATTTATCAAAGGCCCATGGCTTTAATTTCTTCCCAGG
rJMFF017P02+ ACTTGTGTCTTCCAAGGCATGGCATTTATCAAAGGCCCATGGCTTTAATTTCTTCCCAGG
rJMSF026A02+ ACTTGTGTCTTCCAAGGCATGGCATTTATCAAAGGCCCATGGCTTTAATTTCTTCCCAGG
____________________________________________________________
consensus ACTTGTGTCTTCCAAGGCATGGCATTTATCAAAGGCCCATGGCTTTAATTTCTTCCCAGG
. : . : . : . : . : . :
rJMSF023J21+ AACACAAAGTGTTGAGATTCTAGCCGTGTTTAAGAGAGGCTCAAGGGATAGCACTAAAAA
rJMSF020P05+ AACACAAAGTGTTGAGATTCTAGCCGTGTTTAAGAGAGGCTCAAGGGATAGCACTAAAAA
rJMSF010A13+ AACACAAAGTGTTGAGATTCTAGCCGTGTTTAAGAGAGGCTCAAGGGATAGCACTAAAAA
rJMFF027D05+ AACACAAAGTGTTGAGATTCTAGCCGTGTTTAAGAGAGGCTCAAGGGATAGCACTAAAAA
rJMFF022H23+ AACACAAAGTGTTGAGATTCTAGCCGTGTTTAAGAGAGGCTCAAGGGATAGCACTAAAAA
rJMFF017P02+ AACACAAAGTGTTGAGATTCTAGCCGTGTTTAAGAGAGGCTCAAGGGATAGCACTAAAAA
rJMSF026A02+ AACACAAAGTGTTGAGATTCTAGCCGTGTTTAAGAGAGGCTCAAGGGATAGCACTAAAAA
____________________________________________________________
consensus AACACAAAGTGTTGAGATTCTAGCCGTGTTTAAGAGAGGCTCAAGGGATAGCACTAAAAA
. : . : . : . : . : . :
rJMSF023J21+ GAAGAAATTGGGAAAGAAGAAGAAGAATAGGCCTTCTTGAGGAGCATTTGGTAATTGGTA
rJMSF020P05+ GAAGAAATTGGGAAAGAAGAAGAAGAATAGGCCTTCTTGAGGAGCATTTGGTAATTGGTA
rJMSF010A13+ GAAGAAATTGGGAAAGAAGAAGAAGAATAGGCCTTCTTGAGGAGCATTTGGTAATTGGTA
rJMFF027D05+ GAAGAAATTGGGAAAGAAGAAGAAGAATAGGCCTTCTTGAGGAGCATTTGGTAATTGGTA
rJMFF022H23+ GAAGAAATTGGGAAAGAAGAAGAAGAATAGGCCTTCTTGAGGAGCATTTGGTAATTGGTA
rJMFF017P02+ GAAGAAATTGGGAAAGAAGAAGAAGAATAGGCCTTCTTGAGGAGCATTTGGTAATTGGTA
rJMSF026A02+ GAAGAAATTGGGAAAGAAGAAGAAGAATAGGCCTTCTTGAGGGGCATTTGGTAATTGGTA
____________________________________________________________
consensus GAAGAAATTGGGAAAGAAGAAGAAGAATAGGCCTTCTTGAGGAGCATTTGGTAATTGGTA
. : . : . : . : . : . :
rJMSF023J21+ TTTTAAGCAAGCAACAGAATTGGTACGGAGTATTATGCAGAAGAAGCAAATGCTTGGGAA
rJMSF020P05+ TTTTAAGCAAGCAACAGAATTGGTACGGAGTATTATGCAGAAGAAGCAAATGCTTGGGAA
rJMSF010A13+ TTTTAAGCAAGCAACAGAATTGGTACGGAGTATTATGCAGAAGAAGCAAATGCTTGGGAA
rJMFF027D05+ TTTTAAGCAAGCAACAGAATTGGTACGGAGTATTATGCAGAAGAAGCAAATGCTTGGGAA
rJMFF022H23+ TTTTAAGCAAGCAACAGAATTGGTACGGAGTATTATGCAGAAGAAGCAAATGCTTGGGAA
rJMFF017P02+ TTTTAAGCAAGCAACAGAATTGGTACGGAGTATTATGCAGAAGAAGCAAATGCTTNGGAA
rJMSF026A02+ TTTTAAGCAAGCAACAGAATTGGTACGGAGTATTATGCAGAAGAAGCAAATGCTTGGGAA
____________________________________________________________
consensus TTTTAAGCAAGCAACAGAATTGGTACGGAGTATTATGCAGAAGAAGCAAATGCTTGGGAA
. : . : . : . : . : . :
rJMSF023J21+ ACTTCTGAAAAACTCAACATTTGTACGTGTAAATGTGTAATACTTCTGTCATTTTTGCAC
rJMSF020P05+ ACTTCTGAAAAACTCAACATTTGTACGTGTAAATGTGTAATACTTCTGTCATTTTTGCAC
rJMSF010A13+ ACTTCTGAAAAACTCAACATTTGTACGTGTAAATGTGTAATACTTCTGTCATTTTTGCGC
rJMFF027D05+ ACTTCTGAAAAACTCAACATTTGTACGTGTAAATGTGTAATACTTCTGTCATTTTTGCAC
rJMFF022H23+ ACTTCTGAAAAACTCAACATTTGTACGTGTAAATGTGTAATACTTCTGTCATTTTTGCAC
rJMFF017P02+ ACTTCTGAAAAACTCAACATTTGTACGTGTAAATGTGTAATACTTCTGTCATTTTTGCAC
rJMSF026A02+ ACTTCTGAAAAACTCAACATTTGTACGTGTAAATGTGTAATACTTCTGTCATTTTTGCAC
____________________________________________________________
consensus ACTTCTGAAAAACTCAACATTTGTACGTGTAAATGTGTAATACTTCTGTCATTTTTGCAC
. : . : . : . : . : . :
rJMSF023J21+ TACATAAAATTA
rJMSF020P05+ TACATAAAATTATCAATGTAGAATGAAAAAATGACATGAAATACTTACGTTATACACAA-
rJMSF010A13+ TACATAAAATTATCAATGTAGAATGAAAAAATGACATGAAATACTTACGTTATACACAAC
rJMFF027D05+ TACATAAAATTATCAATGTAGAATGAAAAAATGACATGAAATACTTACGTTATACACAA-
rJMFF022H23+ TACATAAAATTATCAATGTAGAATGAAAAAATGACATGAAATACTTACGTTATACACAA-
rJMFF017P02+ TACATAAAATTATCAATGTAGAATGAAAAAATGACATGAAATACTTACGTTATACACAA-
rJMSF026A02+ TACATAAAATTATCAATGTAGAATGAAAAAATGACATGAAATACTTACGTTATACACAA-
____________________________________________________________
consensus TACATAAAATTATCAATGTAGAATGAAAAAATGACATGAAATACTTACGTTATACACAA-
. : . : . : . : . : . :
rJMSF020P05+ CAAAGTG
rJMSF010A13+ CAAAGTGTAAGAATATCCACTAGTCTTGCACAACCAGACCATTC
rJMFF027D05+ CAAAGTG
rJMFF022H23+ CAAAGTG-AAGAATATCCACTAGTCTTGCACAACCAGACCATTCTGTGTAAATATTATTT
rJMFF017P02+ CAAAGTG-AAGAATATCCACTAGTCTTGCACAACCAGACCATTCTGTGTAAATATTATTT
rJMSF026A02+ CAAAGTGTAAGAATATCCACTAGTCTTGCACAACCAGACCATTCTGTGTAAATATTATTT
____________________________________________________________
consensus CAAAGTGTAAGAATATCCACTAGTCTTGCACAACCAGACCATTCTGTGTAAATATTATTT
. : . : . : . : . : . :
rJMFF022H23+ T
rJMFF017P02+ T
rJMSF026A02+ TTAGAACAATAGTGACAATTGTTGAAACACAAAAGTTGTGTCTGTAGAAATATAGCTGTT
____________________________________________________________
consensus TTAGAACAATAGTGACAATTGTTGAAACACAAAAGTTGTGTCTGTAGAAATATAGCTGTT
. : . : . : . : . : . :
rJMSF026A02+ GAAGTTGTGTAGGGTTGTGTCAATAGGATTGTATCTCTTAATTTGTATATATTTCTCTGT
____________________________________________________________
consensus GAAGTTGTGTAGGGTTGTGTCAATAGGATTGTATCTCTTAATTTGTATATATTTCTCTGT