Contig 009983:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF012G01+                                                         TTCAGGAAGAGGT
                      ____________________________________________________________
consensus                                                            TTCAGGAAGAGGT
 
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rJMSF012G01+          GTTGTTAGCATGGCNAACTCAGGCCCGCATTCAAATGGTTCTCAATTTTTCATCCTGTAC
                      ____________________________________________________________
consensus             GTTGTTAGCATGGCNAACTCAGGCCCGCATTCAAATGGTTCTCAATTTTTCATCCTGTAC
 
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rJMSF012G01+          AAGTCTGCAAATCATTTAAATTACAAACACTCAGTTTTCGGTATGGTTGTTGGAGGTTTG
rJMSF025L12+                                             TTTCGGTATGGTTGTTGGAGGTTTG
                      ____________________________________________________________
consensus             AAGTCTGCAAATCATTTAAATTACAAACACTCAGTTTTCGGTATGGTTGTTGGAGGTTTG
 
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rJMSF012G01+          ACAACCCTTTCAGCAATGGAGAAGGTCCCTGTTGATGACAATGACCGCCCTCTGGAAGAA
rJMSF025L12+          ACAACCCTTTCAGCAATGGAGAAGGTCCCTGTTGATGACAATGACCGCCCTCTGGAAGAA
                      ____________________________________________________________
consensus             ACAACCCTTTCAGCAATGGAGAAGGTCCCTGTTGATGACAATGACCGCCCTCTGGAAGAA
 
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rJMSF012G01+          ATCAAGATAATTGATATAGAGGTGTATGTCAATCCCTATGCAGAATCTGATGATGAAGAA
rJMSF025L12+          ATCAAGATAATTGATATAGAGGTGTATGTCAATCCCTATGCAGAATCTGATGATGAAGAA
                      ____________________________________________________________
consensus             ATCAAGATAATTGATATAGAGGTGTATGTCAATCCCTATGCAGAATCTGATGATGAAGAA
 
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rJMSF012G01+          GACGGGGAGAAACCAGAGAACAAAATTGAGGATGAGGACAATGATAAAGTTGGCTCATGG
rJMSF025L12+          GACGGGGAGAAACCAGAGAACAAAATTGAGGATGAGGACAATGATAAGGTTGGCTCATGG
                      ____________________________________________________________
consensus             GACGGGGAGAAACCAGAGAACAAAATTGAGGATGAGGACAATGATAAGGTTGGCTCATGG
 
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rJMSF012G01+          TACAGCAACCCTGGAACAGGAACAGACACTCTAGCTGTTGGTGGTGGTGTTGGGAAATAC
rJMSF025L12+          TACAGCAACCCTGGAACAGGAACAGACACTCTAGCTGTTGGTGGTGGTGTTGGGAAATAC
                      ____________________________________________________________
consensus             TACAGCAACCCTGGAACAGGAACAGACACTCTAGCTGTTGGTGGTGGTGTTGGGAAATAC
 
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rJMSF012G01+          TTTAAAGCAAGGAATGCTCAAGCTGATTCTAATAGCCTTCCTCCAGTTCCTTCATCAAAG
rJMSF025L12+          TTTAAAGCAAGGAATGCTCAAGCTGATTCTAATAGCCTTCCTCCAGTTCCTTCATCAAAG
                      ____________________________________________________________
consensus             TTTAAAGCAAGGAATGCTCAAGCTGATTCTAATAGCCTTCCTCCAGTTCCTTCATCAAAG
 
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rJMSF012G01+          AAGAGAAAAGTAGGTACCTCCACGGGATTCAAAAATTTTTCTGGTTGGGGGTAATTCTGC
rJMSF025L12+          AAGAGAAAAGTAGGTACCTCCACGGGATTCAAAAATTTTTCTGGTTGGGGGTAATTCTGC
                      ____________________________________________________________
consensus             AAGAGAAAAGTAGGTACCTCCACGGGATTCAAAAATTTTTCTGGTTGGGGGTAATTCTGC
 
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rJMSF012G01+          AAGTATATTGTGCAAGTTAAACTACCTTGCATTCAGCCAGGAGGTGCGACGTAGTTTACT
rJMSF025L12+          AAGTATATTGTGCAAGTTAAACTACCTTGCATTCAGCCAGGAGGTGCGACGTAGTTTACT
                      ____________________________________________________________
consensus             AAGTATATTGTGCAAGTTAAACTACCTTGCATTCAGCCAGGAGGTGCGACGTAGTTTACT
 
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rJMSF012G01+          GATGCCCAACAGGAAGGTTCTGAGAGAATGGCTTGTTAAGATCCAGCCTGGGTTCAACCA
rJMSF025L12+          GATGCCCAACAGGAAGGTTCTGAGAGAATGGCTTGTTAAGATCCAGCCTGGGTTCAACCA
                      ____________________________________________________________
consensus             GATGCCCAACAGGAAGGTTCTGAGAGAATGGCTTGTTAAGATCCAGCCTGGGTTCAACCA
 
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rJMSF012G01+          AAGAGTGATAATTGACAGATCTTTGTTGATAAATGTTGAGCAGAAATTTGTATTCACCAC
rJMSF025L12+          AAGAGTGATAATTGACAGATCTTTGTTGATAAATGTTGAGCAGAAATTTGTATTCACCAC
                      ____________________________________________________________
consensus             AAGAGTGATAATTGACAGATCTTTGTTGATAAATGTTGAGCAGAAATTTGTATTCACCAC
 
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rJMSF012G01+          ACAAATTGTGTTTCCAGGCCATGCCTTTTGATGCGATTTAGAAAAACTTGAAAAAATGTT
rJMSF025L12+          ACAAATTGTGTTTCCAGGCCATGCCTTTTGATGCGATTTAGAAAAACTTGAAAAAATGTT
                      ____________________________________________________________
consensus             ACAAATTGTGTTTCCAGGCCATGCCTTTTGATGCGATTTAGAAAAACTTGAAAAAATGTT
 
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rJMSF012G01+          TAAATTGAATATCCTTGTTTTTTACT                                  
rJMSF025L12+          TAAATTGAATATCCTTGTTTTTTACTTACCAAAGTTGTAACTTGTAACATATGCTATTGG
                      ____________________________________________________________
consensus             TAAATTGAATATCCTTGTTTTTTACTTACCAAAGTTGTAACTTGTAACATATGCTATTGG
 
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rJMSF025L12+          GAAAGGAGTATGTCCATTGGGAAAATTGTATAATTTCATTCTTAAAGTGAGAGTTTGCCG
                      ____________________________________________________________
consensus             GAAAGGAGTATGTCCATTGGGAAAATTGTATAATTTCATTCTTAAAGTGAGAGTTTGCCG