Contig 009981:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF047I13+                                                       TTAATTGTCGGCTTA
                      ____________________________________________________________
consensus                                                          TTAATTGTCGGCTTA
 
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rJMSF047I13+          GGAGACTGAAGGAGAATGTTGGGTTCATAGCCAATCGTGTTACAGCAGTGCAGGCTGGTC
                      ____________________________________________________________
consensus             GGAGACTGAAGGAGAATGTTGGGTTCATAGCCAATCGTGTTACAGCAGTGCAGGCTGGTC
 
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rJMSF047I13+          TTGACAGTTGGCAGTCTGCCCAAATTAATAGGAGACTGTATTACCTCTCCTTCCTTTCCA
rJMSF025H06+              CAGTTGGCAGTCTGCCCAAATTAATAGGAGACTGTATTACCTCTCCTTCCTTTCCA
                      ____________________________________________________________
consensus             TTGACAGTTGGCAGTCTGCCCAAATTAATAGGAGACTGTATTACCTCTCCTTCCTTTCCA
 
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rJMSF047I13+          TAATATTTCTTCCTTTATCAGTTATAACTGGAGTGTTTGGGATGAACGTTGGAGGAGTTC
rJMSF025H06+          TAATATTTCTTCCTTTATCAGTTATAACTGGAGTGTTTGGGATGAACGTTGGAGGAGTTC
                      ____________________________________________________________
consensus             TAATATTTCTTCCTTTATCAGTTATAACTGGAGTGTTTGGGATGAACGTTGGAGGAGTTC
 
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rJMSF047I13+          CTTGGACAAACCAAAAGCAACCAGAGTTGCAGGATGGCTTCCGAAATGTCATGCAACTCT
rJMSF025H06+          CTTGGACAAACCAAAAGCAACCAGAGTTGCAGGATGGCTTCCGAAATGTCATGCAACTCT
                      ____________________________________________________________
consensus             CTTGGACAAACCAAAAGCAACCAGAGTTGCAGGATGGCTTCCGAAATGTCATGCAACTCT
 
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rJMSF047I13+          GCCTTGCTATGTTACTGTTTCTCCTTCTGTGCTTTCTTTTCCCGTCTCTTTATAACAAAA
rJMSF025H06+          GCCTTGCTATGTTACTGTTTCTCCTTCTGTGCTTTCTTTTCCCGTCTCTTTATAACAAAA
                      ____________________________________________________________
consensus             GCCTTGCTATGTTACTGTTTCTCCTTCTGTGCTTTCTTTTCCCGTCTCTTTATAACAAAA
 
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rJMSF047I13+          TAATGGCCTGGAGACGAAAGCAGGCTATGAAAAGAAGTTGGTCTATTAACCAAAGATCTT
rJMSF025H06+          TAATGGCCTGGAGACGAAAGCAGGCTATGAAAAGAAGTTGGTCTATTAACCAAAGATCTT
                      ____________________________________________________________
consensus             TAATGGCCTGGAGACGAAAGCAGGCTATGAAAAGAAGTTGGTCTATTAACCAAAGATCTT
 
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rJMSF047I13+          TTGTTAAAAGAGGAACTGGAAGTGCAGAAAGAGCCACCAGAAAAGAAGGCTACCTGCGGC
rJMSF025H06+          TTGTTAAAAGAGGAACTGGAAGTGCAGAAAGAGCCACCAGAAAAGAAGGCTACCTGCGGC
                      ____________________________________________________________
consensus             TTGTTAAAAGAGGAACTGGAAGTGCAGAAAGAGCCACCAGAAAAGAAGGCTACCTGCGGC
 
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rJMSF047I13+          TACACTAGGATCAAACTATCAAAGACATTGGCACTCAAAATTTGTACTGTGAAAAAACTT
rJMSF025H06+          TACACTAGGATCAAACTATCAAAGACATTGGCACTCAAAATTTGTACTGTGAAAAAACTT
                      ____________________________________________________________
consensus             TACACTAGGATCAAACTATCAAAGACATTGGCACTCAAAATTTGTACTGTGAAAAAACTT
 
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rJMSF047I13+          GTTAACAGCCTGAGAATGGAGACCTCATGGATCAGAAAAGGCTTGCTGAGGACCAGGAAC
rJMSF025H06+          GTTAACAGCCTGAGAATGGAGACCTCATGGATCAGAAAAGGCTTGCTGAGGACCAGGAAC
                      ____________________________________________________________
consensus             GTTAACAGCCTGAGAATGGAGACCTCATGGATCAGAAAAGGCTTGCTGAGGACCAGGAAC
 
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rJMSF047I13+          CAATCAAGTTTCAAGATCAGTGACTATTGTGTTTAGTTGTGTAAATCTAGCATTGGAAGA
rJMSF025H06+          CAATCAAGTTTCAAGATCAGTGACTATTGTGTTTAGTTGTGTAAATCTAGCATTGGAAGA
                      ____________________________________________________________
consensus             CAATCAAGTTTCAAGATCAGTGACTATTGTGTTTAGTTGTGTAAATCTAGCATTGGAAGA
 
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rJMSF047I13+          ACCATGAAGTTGGTGATAAAGATTAAATTTTTAACCAATATCTAGAGGCTAGAGCATTCC
rJMSF025H06+          ACCATGAAGTTGGTGATAAAGATTAAATTTTTAACCAATATCTAGAGGCTAGAGCATTCC
                      ____________________________________________________________
consensus             ACCATGAAGTTGGTGATAAAGATTAAATTTTTAACCAATATCTAGAGGCTAGAGCATTCC
 
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rJMSF047I13+          ACCTATAAGAATCATAAATAGATAATCATTATATTTCAAATTTCTTTTATTCGTTTATTG
rJMSF025H06+          ACCTATAAGAATCATAAATAGATAATCATTATATTTCAAATTTCTTTTATTCGTTTATTG
                      ____________________________________________________________
consensus             ACCTATAAGAATCATAAATAGATAATCATTATATTTCAAATTTCTTTTATTCGTTTATTG
 
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rJMSF047I13+          AAACGT                                                      
rJMSF025H06+          AAACGTTATAATAATTGCAAAATGATACTACCTTATGCGAGTATGACCTTTGTCTAAGCA
                      ____________________________________________________________
consensus             AAACGTTATAATAATTGCAAAATGATACTACCTTATGCGAGTATGACCTTTGTCTAAGCA