| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF006F21 | Sequence | 341 | 009977 (6) | ref|XP_011097444.1| | 2e-25 | PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Sesamum | 432 | 009977 (6) | ref|XP_010663563.1| | 2e-60 | PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Vitis vi |
| JMSF023B17 | Sequence | 684 | 009977 (6) | ref|XP_011097444.1| | 1e-100 | PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Sesamum | 759 | 009977 (6) | ref|XP_011097444.1| | 3e-112 | PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Sesamum |
| JMSF025B17 | Sequence | 666 | 009977 (6) | ref|XP_011097444.1| | 1e-79 | PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Sesamum | 770 | 009977 (6) | ref|XP_011097444.1| | 4e-114 | PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Sesamum |
This contig is upended
. : . : . : . : . : . :
JMSF025B17- GACGAATATGA
____________________________________________________________
consensus GACGAATATGA
. : . : . : . : . : . :
JMSF006F21- GTCACATATATTCTTAAAGTTTTAGTTGGGTTG
JMSF025B17- GATACTACATTGCTGTTCCTTGTCGCAGTCACATATATTCTTAAAGTTTTAGTTGGGTTG
____________________________________________________________
consensus GATACTACATTGCTGTTCCTTGTCGCAGTCACATATATTCTTAAAGTTTTAGTTGGGTTG
. : . : . : . : . : . :
JMSF006F21- GGGCCTTGAAGAGGTGAGTTTGCCGCAACAATTTCGTCTGCCTCCTCGAATCGTCTCCCT
JMSF025B17- GGGCCTTGAAGAGGTGAGTTTGCCGCAACAATTTCGTCTGCCTCCTCGAATCGTCTCCCT
JMSF023B17- GAGTTTGCCGCAACAATTTCGTCTGCCTCCTCGAATCGTCTCCCT
____________________________________________________________
consensus GGGCCTTGAAGAGGTGAGTTTGCCGCAACAATTTCGTCTGCCTCCTCGAATCGTCTCCCT
. : . : . : . : . : . :
JMSF006F21- CTCTTGCAGGTGCGGTTGGCTCATTGCCCTAAAGGTCTTAGATTAAGGACTGGGGTTCAT
JMSF025B17- CTCTTGCAGGTGCGGTTGGCTCATTGCCCTAAAGGTCTTAGATTAAGGACTGGGGTTCAT
JMSF023B17- CTCTTGCAGGTGCGGTTGGCTCATTGCCCTAAAGGTCTTAGATTAAGGACTGGGGTTCAT
____________________________________________________________
consensus CTCTTGCAGGTGCGGTTGGCTCATTGCCCTAAAGGTCTTAGATTAAGGACTGGGGTTCAT
. : . : . : . : . : . :
JMSF006F21- CTGAGATCAAGGAAATCAATTGCAATGGGTGATGTTGCCAAGGATTTGACTGCCGGGACT
JMSF025B17- CTGAGATCAAGGAAATCAATTGCAATGGGTGATGTTGCCAAGGATTTGACTGCCGGGACT
JMSF023B17- CTGAGATCAAGGAAATCAATTGCAATGGGTGATGTTGCCAAGGATTTGACTGCCGGGACT
____________________________________________________________
consensus CTGAGATCAAGGAAATCAATTGCAATGGGTGATGTTGCCAAGGATTTGACTGCCGGGACT
. : . : . : . : . : . :
JMSF006F21- GTTGGAGGGGCGGCGCAATTGATATGTGGTCATCCTTTTGATACCATTAAGGTGAAGCTA
JMSF025B17- GTTGGAGGGGCGGCGCAATTGATATGTGGTCATCCTTTTGATACCATTAAGGTGAAGCTA
JMSF023B17- GTTGGAGGGGCGGCGCAATTGATATGTGGTCATCCTTTTGATACCATTAAGGTGAAGCTA
____________________________________________________________
consensus GTTGGAGGGGCGGCGCAATTGATATGTGGTCATCCTTTTGATACCATTAAGGTGAAGCTA
. : . : . : . : . : . :
JMSF006F21- CAAAGTCAGCCGGCTCCCCTTCCCGGGCAGGCGCCGAAATATTCGGGTGCCATGGATGCT
JMSF025B17- CAAAGTCAGCCGGCTCCCCTTCCCGGGCAGGCGCCGAAATATTCGGGTGCCATGGATGCT
JMSF023B17- CAAAGTCAGCCGGCTCCCCTTCCCGGGCAGGCGCCGAAATATTCGGGTGCCATGGATGCT
____________________________________________________________
consensus CAAAGTCAGCCGGCTCCCCTTCCCGGGCAGGCGCCGAAATATTCGGGTGCCATGGATGCT
. : . : . : . : . : . :
JMSF006F21- GTAA
JMSF025B17- GTAAGGCAGACAGTCGCTGCAGAAGGCCCGAGGGGTTTGTACAAAGGCATGGGAGCCCCG
JMSF023B17- GTAAGGCAGACAGTCGCTGCAGAAGGCCCGAGGGGTTTGTACAAAGGCATGGGAGCCCCG
____________________________________________________________
consensus GTAAGGCAGACAGTCGCTGCAGAAGGCCCGAGGGGTTTGTACAAAGGCATGGGAGCCCCG
. : . : . : . : . : . :
JMSF025B17- CTTGCGACTGTGGCTGCCTTCAACGCTGTGCTCTTCACGGTTAGAGGTCAAATGGAGACA
JMSF023B17- CTTGCGACTGTGGCTGCCTTCAACGCTGTGCTCTTCACGGTTAGAGGTCAAATGGAGACA
rJMSF023B17+ TTCAACGCTGTGCTNTTCACGGTTAGAGGTCAAATGGAGACA
rJMSF025B17+ GTGGCTGCCTTCAACGCTGTGCTCTTCACGGTTAGAGGTCAAATGGAGACA
____________________________________________________________
consensus CTTGCGACTGTGGCTGCCTTCAACGCTGTGCTCTTCACGGTTAGAGGTCAAATGGAGACA
. : . : . : . : . : . :
JMSF025B17- TTGGTGAGGTCTGAACCAGGTGTCCCGCTTACTGTGAGCCAGCAAATCATTTGCGGGGCA
JMSF023B17- TTGGTGAGGTCTGAACCAGGTGTCCCGCTTACTGTGAGCCAGCAAATCATTTGCGGGGCA
rJMSF023B17+ TTGGTGAGGTCTGAACCAGGTGTCCCGCTTACTGTGAGCCAGCAAATCATTTGCGGGGCA
rJMSF025B17+ TTGGTGAGGTCTGAACCAGGTGTCCCGCTTACTGTGAGCCAGCAAATCATTTGCGGGGCA
____________________________________________________________
consensus TTGGTGAGGTCTGAACCAGGTGTCCCGCTTACTGTGAGCCAGCAAATCATTTGCGGGGCA
. : . : . : . : . : . :
JMSF025B17- GGGGCAGGAACTGCCGTTTCTTTTCTCGCCTGCCCAACTGAATTAATCAAATGCAGATTG
JMSF023B17- GGGGCAGGAACTGCCGTTTCTTTTCTCGCCTGCCCAACTGAATTAATCAAATGCAGATTG
rJMSF023B17+ GGGGCAGGAACTGCCGTTTCTTTTCTCGCCTGCCCAACTGAATTAATCAAATGCAGATTG
rJMSF025B17+ GGGGCAGGAACTGCCGTTTCTTTTCTCGCCTGCCCAACTGAATTAATCAAATGCAGATTG
____________________________________________________________
consensus GGGGCAGGAACTGCCGTTTCTTTTCTCGCCTGCCCAACTGAATTAATCAAATGCAGATTG
. : . : . : . : . : . :
JMSF025B17- CAGGCGCAGAGTGCGTTAGCTGTANCAGGTGGAGCTGCGGTGGCAGCAGTGAA
JMSF023B17- CAGGCGCAGAGTGCGTTAGCTGTAGCAGGTGGAGCTGCGGTGGCAGCAGTGAAGTATTCC
rJMSF023B17+ CAGGCGCAGAGTGCGTTAGCTGTAGCAGGTGGAGCTGCGGTGGCAGCAGTGAAGTATTCC
rJMSF025B17+ CAGGCGCAGAGTGCGTTAGCTGTAGCAGGTGGAGCTGCGGTGGCAGCAGTGAAGTATTCC
____________________________________________________________
consensus CAGGCGCAGAGTGCGTTAGCTGTAGCAGGTGGAGCTGCGGTGGCAGCAGTGAAGTATTCC
. : . : . : . : . : . :
JMSF023B17- GGGCCAATGGACGTGGCGAGGCAAGTCCTCCGGTCCGAAGGANGCACGAGGGGCCTCTTC
rJMSF006F21+ TCCGAAGGAGGCACGANGGGCCTNTNC
rJMSF023B17+ GGGCCAATGGACGTGGCGAGGCAAGTCCTCCGGTCCGAAGGAGGCACGAGGGGCCTCTTC
rJMSF025B17+ GGGCCAATGGACGTGGCGAGGCAAGTCCTCCGGTCCGAAGGAGGCACGAGGGGCCTCTTC
____________________________________________________________
consensus GGGCCAATGGACGTGGCGAGGCAAGTCCTCCGGTCCGAAGGAGGCACGAGGGGCCTCTTC
. : . : . : . : . : . :
JMSF023B17- AAGGGACTGGTCCCCACTATGGCTCGTGAAATACCCGGA
rJMSF006F21+ AAGGGACTGGTCCCCANTATGGCTCGTGAAATACCCGGAAACGCTGCAATGTTCGGTGTG
rJMSF023B17+ AAGGGACTGGTCCCCACTATGGCTCGTGAAATACCCGGAAACGCTGCAATGTTCGGTGTG
rJMSF025B17+ AAGGGACTGGTCCCCACTATGGCTCGTGAAATACCCGGAAACGCTGCAATGTTCGGTGTG
____________________________________________________________
consensus AAGGGACTGGTCCCCACTATGGCTCGTGAAATACCCGGAAACGCTGCAATGTTCGGTGTG
. : . : . : . : . : . :
rJMSF006F21+ TACGAGGCCATAAAGCAGTACCTTGCAGGCGGGCAGGACACTTCGGGGCTGGGACGAGGC
rJMSF023B17+ TACGAGGCCATAAAGCAGTACCTTGCAGGCGGGCAGGACACTTCGGGGCTGGGACGAGGC
rJMSF025B17+ TACGAGGCCATAAAGCAGTACCTTGCAGGCGGGCAGGACACTTCGGGGCTGGGACGAGGC
____________________________________________________________
consensus TACGAGGCCATAAAGCAGTACCTTGCAGGCGGGCAGGACACTTCGGGGCTGGGACGAGGC
. : . : . : . : . : . :
rJMSF006F21+ TCTCTGATTATAGCAGGAGGACTGGCTGGGGCTTCCTTTTGGATTTCTGTCTACCCCACC
rJMSF023B17+ TCTCTGATTATAGCAGGAGGACTGGCTGGGGCTTCCTTTTGGATTTCTGTCTACCCCACC
rJMSF025B17+ TCTCTGATTATAGCAGGAGGACTGGCTGGGGCTTCCTTTTGGATTTCTGTCTACCCCACC
____________________________________________________________
consensus TCTCTGATTATAGCAGGAGGACTGGCTGGGGCTTCCTTTTGGATTTCTGTCTACCCCACC
. : . : . : . : . : . :
rJMSF006F21+ GACGTGATCAAGAGCGTAATCCAGGTNGACGATTACAAGAAGCCTAAGTTCTCGGGCTCC
rJMSF023B17+ GACGTGATCAAGAGCGTAATCCAGGTCGACGATTACAAGAAGCCTAAGTTCTCGGGCTCC
rJMSF025B17+ GACGTGATCAAGAGCGTAATCCAGGTCGACGATTACAAGAAGCCTAAGTTCTCGGGCTCC
____________________________________________________________
consensus GACGTGATCAAGAGCGTAATCCAGGTCGACGATTACAAGAAGCCTAAGTTCTCGGGCTCC
. : . : . : . : . : . :
rJMSF006F21+ ATCGACGCCTTCAAAAAGATCTTGGCGTCGGAGGGAGTGAAGGGCCTTTACAAAGGATTT
rJMSF023B17+ ATCGACGCCTTCAAAAAGATCTTGGCGTCGGAGGGAGTGAAGGGCCTTTACAAAGGATTT
rJMSF025B17+ ATCGACGCCTTCAAAAAGATCTTGGCGTCGGAGGGAGTGAAGGGCCTTTACAAAGGATTT
____________________________________________________________
consensus ATCGACGCCTTCAAAAAGATCTTGGCGTCGGAGGGAGTGAAGGGCCTTTACAAAGGATTT
. : . : . : . : . : . :
rJMSF006F21+ GGACCAGCCATGGCTAGAAGTGTTCCAGCAAATGCAGCTTGNTTCTTGGCTTATGAGGTT
rJMSF023B17+ GGACCAGCCATGGCTAGAAGTGTTCCAGCAAATGCAGCTTGCTTCTTGGCTTATGAGGTT
rJMSF025B17+ GGACCAGCCATGGCTAGAAGTGTTCCAGCAAATGCAGCTTGCTTCTTGGCTTATGAGGTT
____________________________________________________________
consensus GGACCAGCCATGGCTAGAAGTGTTCCAGCAAATGCAGCTTGCTTCTTGGCTTATGAGGTT
. : . : . : . : . : . :
rJMSF006F21+ ATCAAGGTCCANTTTGGGCTAATAATATAATGCCTTTCTTAACCA
rJMSF023B17+ A-CAAGGTCCAGTTTGGGCTAATAATATAATGCCTTTCTTAACCATTCATTCTCAGCTTT
rJMSF025B17+ A-CAAGGTCCAGTTTGGGCTAATAATATAATGCCTTTCTTAACCATTCATTCTCAGCTTT
____________________________________________________________
consensus A-CAAGGTCCAGTTTGGGCTAATAATATAATGCCTTTCTTAACCATTCATTCTCAGCTTT
. : . : . : . : . : . :
rJMSF023B17+ TCAGCTAGCCATTTCTCATTCAACAATTTATTCTTATTTCATAACAATTTTAT
rJMSF025B17+ TCAGCTAGCCATTTCTCATTCAACAATTTATTCTTATTTCATAACAATTTTATTCAAAAT
____________________________________________________________
consensus TCAGCTAGCCATTTCTCATTCAACAATTTATTCTTATTTCATAACAATTTTATTCAAAAT