Contig 009974:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023N04Sequence679009974 (2)ref|XP_002284112.1|2e-48PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Vitis vinifera] emb|CBI15127725009974 (2)ref|NP_001274920.1|4e-35glucan endo-1,3-beta-glucosidase-like protein 3-like precursor [Solanum tuberos

Alignment

This contig is upended


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JMSF023N04-                                          TGCCTGAAAGATCCATCACTTCCCAAACA
                      ____________________________________________________________
consensus                                            TGCCTGAAAGATCCATCACTTCCCAAACA
 
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JMSF023N04-           CACCCCCCTCTCTTTCTCACTCCCCACTACTATACATCTTCTGCTTAGCAGCCTTTTTAT
                      ____________________________________________________________
consensus             CACCCCCCTCTCTTTCTCACTCCCCACTACTATACATCTTCTGCTTAGCAGCCTTTTTAT
 
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JMSF023N04-           CACCATTTCTGAGCACCCATTCTAAACACTTCCTAAACAGCCCACACAGCCACCTTGTGT
                      ____________________________________________________________
consensus             CACCATTTCTGAGCACCCATTCTAAACACTTCCTAAACAGCCCACACAGCCACCTTGTGT
 
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JMSF023N04-           TGTCCTCTCAGCTCACTACTGTCATGGCTTCCTTGGTGTTTGCACTGCTCCTTCTGGCCA
                      ____________________________________________________________
consensus             TGTCCTCTCAGCTCACTACTGTCATGGCTTCCTTGGTGTTTGCACTGCTCCTTCTGGCCA
 
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JMSF023N04-           TGGCTGGTCATTCAAGTGGAAGTGCAACATGGTGTGTTCGCAAGGAAGGAATGGGGGATT
rJMSF023N04+                                                                 GGATT
                      ____________________________________________________________
consensus             TGGCTGGTCATTCAAGTGGAAGTGCAACATGGTGTGTTCGCAAGGAAGGAATGGGGGATT
 
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JMSF023N04-           CAGCATTGCAGAAGACACTGGACTATGCCTGTGGAGCAGGGGCAGACTGCAACCCCATTA
rJMSF023N04+          CAGCATTGCAGAAGACACTGGACTATGCCTGTGGAGCAGGGGCAGACTGCAACCCCATTA
                      ____________________________________________________________
consensus             CAGCATTGCAGAAGACACTGGACTATGCCTGTGGAGCAGGGGCAGACTGCAACCCCATTA
 
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JMSF023N04-           AACCAAATGGGCAATGCTACAACCCCAACACAGTGAGAGCTCACTGCAACTATGCAGTCA
rJMSF023N04+          AACCAAATGGGCAATGCTACAACCCCAACACAGTGAGAGCTCACTGCAACTATGCAGTCA
                      ____________________________________________________________
consensus             AACCAAATGGGCAATGCTACAACCCCAACACAGTGAGAGCTCACTGCAACTATGCAGTCA
 
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JMSF023N04-           ACAGCTATTTCCAGAAAAGGGGCCAAGCTGCTGGGGCATGTGACTTTGCCAGCACTGCCA
rJMSF023N04+          ACAGCTATTTCCAGAAAAGGGGCCAAGCTGCTGGGGCATGTGACTTTGCCAGCACTGCCA
                      ____________________________________________________________
consensus             ACAGCTATTTCCAGAAAAGGGGCCAAGCTGCTGGGGCATGTGACTTTGCCAGCACTGCCA
 
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JMSF023N04-           CTGTGGCCACCTCTGACCCTAGTGTGACTGGCTGTGTTTATCCTTCTAGTGCAAGTGGTG
rJMSF023N04+          CTGTGGCCACCTCTGACCCTAGTGTGACTGGCTGTGTTTATCCTTCTAGTGCAAGTGGTG
                      ____________________________________________________________
consensus             CTGTGGCCACCTCTGACCCTAGTGTGACTGGCTGTGTTTATCCTTCTAGTGCAAGTGGTG
 
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JMSF023N04-           GTGGTGGTGGTGGCGGCGGCAGCAGCACAACAACAACCAGTCCCACTACTAACACCGGAC
rJMSF023N04+          GTGGTGGTGGTGGCGGCGGCAGCAGCACAACAACAACCAGTCCCACTACTAACACCGGAC
                      ____________________________________________________________
consensus             GTGGTGGTGGTGGCGGCGGCAGCAGCACAACAACAACCAGTCCCACTACTAACACCGGAC
 
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JMSF023N04-           TGCCATCCACCGGCTCCCCGATCGTCACAACTCCCAACGGCGGTTCTCTTGGCGGCAGTG
rJMSF023N04+          TGCCATCCACCGGCTCCCCGATCGTCACAACTCCCAACGGCGGTTCTCTTGGCGGCAGTG
                      ____________________________________________________________
consensus             TGCCATCCACCGGCTCCCCGATCGTCACAACTCCCAACGGCGGTTCTCTTGGCGGCAGTG
 
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JMSF023N04-           GCGTCGGAATCAACAACGGCTTANGTCCATCGGGTAACGGCATGAACGAC          
rJMSF023N04+          GCGTCGGAATCAACAACGGCTTAGGTCCATCGGGTAACGGCATGAACGACATGAGCCACG
                      ____________________________________________________________
consensus             GCGTCGGAATCAACAACGGCTTAGGTCCATCGGGTAACGGCATGAACGACATGAGCCACG
 
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rJMSF023N04+          GTGGGATTTCTCAACAAGGGACCCTCCCCTTCATCACCCTCATATCCTATGCTGTAGCAT
                      ____________________________________________________________
consensus             GTGGGATTTCTCAACAAGGGACCCTCCCCTTCATCACCCTCATATCCTATGCTGTAGCAT
 
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rJMSF023N04+          CATGCTATTGGTGGCTCCAATAATAACTATATTATGAATTATATTGCTGATGGGAATGAA
                      ____________________________________________________________
consensus             CATGCTATTGGTGGCTCCAATAATAACTATATTATGAATTATATTGCTGATGGGAATGAA
 
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rJMSF023N04+          TGATGAATGGATGTGATGAGCGGCTACTACTATCTATCACTATCAGGTGTGCAAGGAGTA
                      ____________________________________________________________
consensus             TGATGAATGGATGTGATGAGCGGCTACTACTATCTATCACTATCAGGTGTGCAAGGAGTA
 
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rJMSF023N04+          TCATATCTTTGGACAGCCCTGCTTCTTCTTCTTTTTAATTTTTATTTTAATTTGTATATT
                      ____________________________________________________________
consensus             TCATATCTTTGGACAGCCCTGCTTCTTCTTCTTTTTAATTTTTATTTTAATTTGTATATT
 
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rJMSF023N04+          AGTACTTTGGAGCTGAGAACGTTAATCATATATTAGTAATGTTGTCGGATGTATCTTTTG
                      ____________________________________________________________
consensus             AGTACTTTGGAGCTGAGAACGTTAATCATATATTAGTAATGTTGTCGGATGTATCTTTTG