Contig 009972:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF023I02+                                      AGCAGGGACGGCGGAGTGGATGGCACCAGAAG
                      ____________________________________________________________
consensus                                         AGCAGGGACGGCGGAGTGGATGGCACCAGAAG
 
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rJMSF023I02+          TGCTGCGAAATGAGCCTTCGGATGAGAAATGTGACGTATATAGCTATGGCGTCATACTAT
                      ____________________________________________________________
consensus             TGCTGCGAAATGAGCCTTCGGATGAGAAATGTGACGTATATAGCTATGGCGTCATACTAT
 
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rJMSF023I02+          GGGAGCTTTGCACGTTGCAGCAACCATGGGGAGGGATGAACCCGATGCAAGTTGTGGGTG
                      ____________________________________________________________
consensus             GGGAGCTTTGCACGTTGCAGCAACCATGGGGAGGGATGAACCCGATGCAAGTTGTGGGTG
 
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JMFN028E18-                                            CGGACGACATGGATCCTGCCATTGCGG
JMFS145C11+                                            CGGACGACATGGATCCTGCCATTGCGG
rJMSF023I02+          CCGTTGGATTTCAGCACCGTCGTCTAGACATACCGGACGACATGGATCCTGCCATTGCGG
                      ____________________________________________________________
consensus             CCGTTGGATTTCAGCACCGTCGTCTAGACATACCGGACGACATGGATCCTGCCATTGCGG
 
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JMFN028E18-           ACATCATTAGAAAGTGCTGGCAAACAGACCCAAGATTACGGCCTTCGTTTGCTGAAATCA
JMFS145C11+           ACATCATTAGAAAGTGCTGGCAAACAGACCCAAGATTACGGCCTTCGTTTGCTGAAATCA
rJMSF023I02+          ACATCATTAGAAAGTGCTGGCAAACAGACCCAAGATTACGGCCTTCGTTTGCTGAAATCA
                      ____________________________________________________________
consensus             ACATCATTAGAAAGTGCTGGCAAACAGACCCAAGATTACGGCCTTCGTTTGCTGAAATCA
 
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JMFN028E18-           TGGCTGCGCTAAAGCCTCTGCAGAAGCCTATTACGGGCTCCCAAGCATCGAAGGCAGTGG
JMFS145C11+           TGGCTGCGCTAAAGCCTCTGCAGAAGCCTATTACGGGCTCCCAAGCATCGAAGGCAGTGG
rJMSF023I02+          TGGCTGCGCTAAAGCCTCTGCAGAAGCCTATTACGGGCTCCCAAGCATCGAAGGCAGTGG
                      ____________________________________________________________
consensus             TGGCTGCGCTAAAGCCTCTGCAGAAGCCTATTACGGGCTCCCAAGCATCGAAGGCAGTGG
 
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JMFN028E18-           CGTCCAGAAGCCAAGAGAAAGGCCAGTCGTCGAAGACTTGAGAAGATTCAGTTCAGTGGC
JMFS145C11+           CGTCCAGAAGCCAAGAGAAAGGCCAGTCGTCGAAGACTTGAGAAGATTCAGTTCAGTGGC
rJMSF023I02+          CGTCCAGAAGCCAAGAGAAAGGCCAGTCGTCGAAGACTTGAGAAGATTCAGTTCAGTGGC
                      ____________________________________________________________
consensus             CGTCCAGAAGCCAAGAGAAAGGCCAGTCGTCGAAGACTTGAGAAGATTCAGTTCAGTGGC
 
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JMFN028E18-           TCAAAGGAGCCGCTGAAGAAAAGCAAAAAACTAGATTTCAGTTCTTGGAAAAGCAGAAAG
JMFS145C11+           TCAAAGGAGCCGCTGAAGAAAAGCAAAAAACTAGATTTCAGTTCTTGGAAAAGCAGAAAG
rJMSF023I02+          TCAAAGGAGCCGCTGAAGAAAAGCAAAAAACTAGATTTCAGTTCTTGGAAAAGCAGAAAG
                      ____________________________________________________________
consensus             TCAAAGGAGCCGCTGAAGAAAAGCAAAAAACTAGATTTCAGTTCTTGGAAAAGCAGAAAG
 
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JMFN028E18-           AAATGAAAAATCTGAAGGGGGATAAATAAAAGATCCTGACAAAAACACACACTTGACTTG
JMFS145C11+           AAATGAAAAATCTGAAGGGGGATAAATAAAAGATCCTGACAAAAACACACACTTGACTTG
rJMSF023I02+          AAATGAAAAATCTGAAGGGGGATAAATAAAAGATCCTGACAAAAACACACACTTGACTTG
                      ____________________________________________________________
consensus             AAATGAAAAATCTGAAGGGGGATAAATAAAAGATCCTGACAAAAACACACACTTGACTTG
 
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JMFN028E18-           ATAGCAATTTGTGATTCTTTACCTTCCCTTTTTGTTCTTGCTCTTTTTTCCATGTTCTCT
JMFS145C11+           ATAGCAATTTGTGATTCTTTACCTTCCCTTTTTGTTCTTGCTCTTTTTTCCATGTTCTCT
rJMSF023I02+          ATAGCAATTTGTGATTCTTTACCTTCCCTTTTTGTTCTTGCTCTTTTTTCCATGTTCTCT
                      ____________________________________________________________
consensus             ATAGCAATTTGTGATTCTTTACCTTCCCTTTTTGTTCTTGCTCTTTTTTCCATGTTCTCT
 
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JMFN028E18-           TTTACTTAGTTTCTTGTATTCTTGGCTTACATCATTTGCCATCATCCTCAGAATTATGTA
JMFS145C11+           TTTACTTAGTTTCTTGTATTCTTGGCTTACATCATTTGCCATCATCCTCAGAATTATGTA
rJMSF023I02+          TTTACTTAGTTTCTTGTATTCTTGGCTTACATCATTTGCCATCATCCTCAGAATTATGTA
                      ____________________________________________________________
consensus             TTTACTTAGTTTCTTGTATTCTTGGCTTACATCATTTGCCATCATCCTCAGAATTATGTA
 
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JMFN028E18-           TTTGTTTGTACATTAATTTTGAAATCTGTTGTAATTACAAATGAATAGTGATTGCTTGTG
JMFS145C11+           TTTGTTTGTACATTAATTTTGAAATCTGTTGTAATTACAAATGAATAGTGATTGCTTGTG
rJMSF023I02+          TTTGTTTGTACATTAATTTTGAAATCTGTTGTAATTACAAATGAATAGTGATTGCTTGTG
                      ____________________________________________________________
consensus             TTTGTTTGTACATTAATTTTGAAATCTGTTGTAATTACAAATGAATAGTGATTGCTTGTG
 
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JMFN028E18-           TTTTGAGTTTTGAGGGTATAATCAACCTTTGCTTATCTA                     
JMFS145C11+           TTTTGAGTTTTGAGGGTAT                                         
rJMSF023I02+          TTTTGAGTTTTGAGGGTATAATCAACCTTTGCTTATCTATCCCATGCAAGGATATGATCT
                      ____________________________________________________________
consensus             TTTTGAGTTTTGAGGGTATAATCAACCTTTGCTTATCTATCCCATGCAAGGATATGATCT