Contig 009971:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF030P21-                                                      GAAGCCTTTTCTCTAGC
                      ____________________________________________________________
consensus                                                        GAAGCCTTTTCTCTAGC
 
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JMSF030P21-           TTGGGAGCCATGAAAATCTTCGGTGTTCTTCCTCTCGTTGCTACAACATGACTCTATCCA
                      ____________________________________________________________
consensus             TTGGGAGCCATGAAAATCTTCGGTGTTCTTCCTCTCGTTGCTACAACATGACTCTATCCA
 
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JMSF030P21-           CCACGTATGCCAGCTGAATCCCCTGGGGAGTTGCCTTCCTGCTTGTGCTCCTCCTCTTCA
                      ____________________________________________________________
consensus             CCACGTATGCCAGCTGAATCCCCTGGGGAGTTGCCTTCCTGCTTGTGCTCCTCCTCTTCA
 
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JMSF030P21-           TGATTTCTTATCAATCCTATTTTCGCGAACTCTGGTTCCCCTTCTCGCCAGATGATTCAT
rJMSF023E20+                              TTTCGCGAACTCTGGTTCCCCTTCTCGCCAGATGATTCAT
                      ____________________________________________________________
consensus             TGATTTCTTATCAATCCTATTTTCGCGAACTCTGGTTCCCCTTCTCGCCAGATGATTCAT
 
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JMSF030P21-           TCAAGCTCAATATGATCCAGAAACGCATGTTCTCTCTTTGTCATCTAAAAGGATTCAGAT
rJMSF023E20+          TCAAGCTCAATATGATCCAGAAACGCATGTTCTCTCTTTGTCATCTAAAAGGATTCAGAT
                      ____________________________________________________________
consensus             TCAAGCTCAATATGATCCAGAAACGCATGTTCTCTCTTTGTCATCTAAAAGGATTCAGAT
 
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JMSF030P21-           CCAGAAACATTACATTAGAAGCAGTGTCGGCAACCTCTCCTCCGCCGTACACCGCTTCCT
rJMSF023E20+          CCAGAAACATTACATTAGAAGCAGTGTCGGCAACCTCTCCTCCGCCGTACACCGCTTCCT
                      ____________________________________________________________
consensus             CCAGAAACATTACATTAGAAGCAGTGTCGGCAACCTCTCCTCCGCCGTACACCGCTTCCT
 
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JMSF030P21-           TCTCAAACAGCTCCACCAGTCCAAATCCCCAAATGGCAAGGAGCTACACAGCGACCAAGC
rJMSF023E20+          TCTCAAACAGCTCCACCAGTCCAAATCCCCAAATGGCAAGGAGCTACACAGCGACCAAGC
                      ____________________________________________________________
consensus             TCTCAAACAGCTCCACCAGTCCAAATCCCCAAATGGCAAGGAGCTACACAGCGACCAAGC
 
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JMSF030P21-           AGTCCGAGAACTATTTGTCGAAGCTCTAACCGTGTGTGGCAGATGCGACACAGCTTGGG 
rJMSF030P21+                                                                    GC
rJMSF023E20+          AGTCCGAGAACTATTTGTCGAAGCTCTAACCGTGTGTGGCAGATGCGACACAGCTTGGGC
                      ____________________________________________________________
consensus             AGTCCGAGAACTATTTGTCGAAGCTCTAACCGTGTGTGGCAGATGCGACACAGCTTGGGC
 
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rJMSF030P21+          CAAGAGNTAAANGAGAGAGAGAGNGNTTTGAGGNAGAAAAAAGGTGNAGGAGTNGGCAGG
rJMSF023E20+          CAAGAGATAAAGGAGAGAGAGAGAGATTTGAGGAAGAAAAAAGATGAAGGAGTCGGCAGG
                      ____________________________________________________________
consensus             CAAGAGATAAAGGAGAGAGAGAGAGATTTGAGGAAGAAAAAAGGTGAAGGAGTCGGCAGG
 
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rJMSF030P21+          CAAATTCCTTTCCCCTTCTCCATCNACTCCNAGTCATTTACTTCANNATAATTACTCCTN
rJMSF023E20+          CAAATTCATTTCCCCTTCTCCATCTACTCCAAGTCATTTACTTCAATATAATTACTCCTC
                      ____________________________________________________________
consensus             CAAATTCCTTTCCCCTTCTCCATCTACTCCAAGTCATTTACTTCAATATAATTACTCCTC
 
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rJMSF030P21+          NTCANTNCTGGTANATTTCCGNTGGCAATGTTTCAANCATNGAANTCNCTCANGTTTNAT
rJMSF023E20+          TTCATTATTGGTATATTTCCGTTGGCAATGTTTCAATCATTGAAATCATTCATGTTTAAT
                      ____________________________________________________________
consensus             TTCATTATTGGTATATTTCCGTTGGCAATGTTTCAATCATTGAAATCATTCATGTTTAAT
 
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rJMSF030P21+          TNATAATNNGTTATNAGCNTGTNTCAATNATATCAGTTTGTGGTNAGAATGT        
rJMSF023E20+          TTATAATCTGTTATAAGCATGTCTCAATTATATCAGTTTGTGGTAAGAATGTTGAAGCCA
                      ____________________________________________________________
consensus             TTATAATCTGTTATAAGCATGTCTCAATTATATCAGTTTGTGGTAAGAATGTTGAAGCCA
 
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rJMSF023E20+          TAAGCCCTTCAAGCGTCCACTCCTTGGAACACGAGCACTGAGGCAACTCTGATGCTGCTG
                      ____________________________________________________________
consensus             TAAGCCCTTCAAGCGTCCACTCCTTGGAACACGAGCACTGAGGCAACTCTGATGCTGCTG
 
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rJMSF023E20+          CTAGGAAGGATTCCAAGGAAGTGAGGAGTGCTAGACATGCTTAACATGCATTGTGTGACT
                      ____________________________________________________________
consensus             CTAGGAAGGATTCCAAGGAAGTGAGGAGTGCTAGACATGCTTAACATGCATTGTGTGACT
 
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rJMSF023E20+          ATGAGAGGCAATGGGCTGGAGTGAAAATTTTGATTTGGACTTTTGATATTCAAACAGACT
                      ____________________________________________________________
consensus             ATGAGAGGCAATGGGCTGGAGTGAAAATTTTGATTTGGACTTTTGATATTCAAACAGACT
 
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rJMSF023E20+          AAGACGACTGAACAAAGAAAAAGTCATTTGAAATTGCTTTTTATACCGATGTATTGGAAC
                      ____________________________________________________________
consensus             AAGACGACTGAACAAAGAAAAAGTCATTTGAAATTGCTTTTTATACCGATGTATTGGAAC