Contig 009970:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF023D23Sequence626007884 (3)ref|XP_006341192.1|164PREDICTED: uncharacterized protein LOC102602443 [Solanum tuberosum]669009970 (3)ref|XP_009615566.1|50.1PREDICTED: uncharacterized protein LOC104108278 [Nicotiana tomentosiformis]
JMSF035K13Sequence651007884 (3)ref|XP_006341192.1|187PREDICTED: uncharacterized protein LOC102602443 [Solanum tuberosum]639009970 (3)ref|XP_011094444.1|146PREDICTED: uncharacterized protein LOC105174142 [Sesamum indicum]
JMSF039F05Sequence296009970 (3)171004297 (10)ref|XP_004230389.1|4e-05PREDICTED: glutathione S-transferase zeta class-like isoform X2 [Solanum lycope

Alignment

This contig is upended


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rJMSF023D23+                                                             GTCGGTTTT
                      ____________________________________________________________
consensus                                                                GTCGGTTTT
 
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rJMSF023D23+          AGCGGGCTTNTGGGGTCAGTTTTTTGTTAGAAAATCATCACAATNTTAAAGCGGGCGTCA
                      ____________________________________________________________
consensus             AGCGGGCTTNTGGGGTCAGTTTTTTGTTAGAAAATCATCACAATNTTAAAGCGGGCGTCA
 
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rJMSF023D23+          ATCATTGNGTTCATCCTCTCCGGTGTTATTTTTGCCAGCGCTCTCACAANGGGTAAATCC
                      ____________________________________________________________
consensus             ATCATTGNGTTCATCCTCTCCGGTGTTATTTTTGCCAGCGCTCTCACAANGGGTAAATCC
 
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rJMSF023D23+          CTTCCAATATTTCNTTCCCCACTTGCATCCATTTTTATATATGCGGCCTCATNTNTAACA
                      ____________________________________________________________
consensus             CTTCCAATATTTCNTTCCCCACTTGCATCCATTTTTATATATGCGGCCTCATNTNTAACA
 
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rJMSF035K13+                                                               GGGGTTA
rJMSF023D23+          TAACCGAATGAGATCAGGTGNGATTTGAATACGNGACNTNGAACTTTTATGCAGGGGTTA
                      ____________________________________________________________
consensus             TAACCGAATGAGATCAGGTGNGATTTGAATACGNGACNTNGAACTTTTATGCAGGGGTTA
 
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JMSF039F05-                                                              TTTTGGATT
rJMSF035K13+          TCGGTGTAGAGAAGAGTGTGAGCNTGATACAGAATCACGAGTTCATGGGGTTTTTGGATT
rJMSF023D23+          TCNGNGTAGAGAAGAGTGTGAGCNTGATACAGAATCNCGAGTTCATGGGGNTTTTGGATT
                      ____________________________________________________________
consensus             TCGGTGTAGAGAAGAGTGTGAGCNTGATACAGAATCACGAGTTCATGGGGTTTTTGGATT
 
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JMSF039F05-           TCTGTAGCAGCCAGCAATGATGGAAGATGATAATAATGCAATAATAATGATAATAATGCA
rJMSF035K13+          TCTGTAGCAGCCAGCAATGATGGAAGATGATAATAATGCAATAATAATGATAATAATGCA
rJMSF023D23+          TCNGTAGCAGCCANCAATGATGGAAGATGATAATAATGCAATAATAATGATNATAATGCA
                      ____________________________________________________________
consensus             TCTGTAGCAGCCAGCAATGATGGAAGATGATAATAATGCAATAATAATGATAATAATGCA
 
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JMSF039F05-           ATAATAAAAATAATAATAAATGTATAGAAAAGGTTACGTTGCAGGGAGAGTTGTTGGTCA
rJMSF035K13+          ATAATAAAAATAATAATAAATGTATAGAAAAGGTTACGTTGCAGGGAGAGTTGTTGGTCA
rJMSF023D23+          ATAATAAAAATAATAATAAATGTATAGAAAAGGTTACGNTGCAGGGAGAGTTGTTGGTCA
                      ____________________________________________________________
consensus             ATAATAAAAATAATAATAAATGTATAGAAAAGGTTACGTTGCAGGGAGAGTTGTTGGTCA
 
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JMSF039F05-           ATGCCTAATTGACCGCATCCTTGCAGAACCTTTTCATATTGTTGCCGAAGGTTAGCCACC
rJMSF035K13+          ATGCCTAATTGACCGCATCCTTGCAGAACCTTTTCATATTGTTGCCGAAGGTTAGCCACC
rJMSF023D23+          ANGCCTAATTGACCGCATCCTTGCAGAACCTTTTCATATTGTTGCCGAAGGTTAGCCNCC
                      ____________________________________________________________
consensus             ATGCCTAATTGACCGCATCCTTGCAGAACCTTTTCATATTGTTGCCGAAGGTTAGCCACC
 
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JMSF039F05-           GCTAACCGCATACCTGCAGAACCTTTTCATCTTGTTGCCGAAGGTTAGCCACCGCTAACC
rJMSF035K13+          GCTAACCGCATACCTGCAGAACCTTTTCATCTTGTTGCCGAAGGTTAGCCACCGCTAACC
rJMSF023D23+          GCTAACCGCATACCTGCAGAACCTTTTCATNTTGTTGCCGAAGGTTAGCCACCGCTAACC
                      ____________________________________________________________
consensus             GCTAACCGCATACCTGCAGAACCTTTTCATCTTGTTGCCGAAGGTTAGCCACCGCTAACC
 
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JMSF039F05-           GCATCGGCAAGCAGCATTGTAACAATTGTCGTTTTTTTTTTT                  
rJMSF035K13+          GCATCGGCAAGCAGCATTGTAACAATTGTCGTTTTTTTTTTTCGTGGCAGTGTCGTCCGA
rJMSF023D23+          GCATNGGCAAGCAGCNTTGTAACAATTGTCGTTTTTTTTTTTCGTGGCAGTGTCGTCCGA
                      ____________________________________________________________
consensus             GCATCGGCAAGCAGCATTGTAACAATTGTCGTTTTTTTTTTTCGTGGCAGTGTCGTCCGA
 
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rJMSF035K13+          TTGGTTATCCATCGGTAACGTACCCGGCGTCAAGT                         
rJMSF023D23+          TTGGTTATCCATCGGTAACGTACCCGGCGTCAAGTTGCCACCATTCTGTTCAATGTAATG
                      ____________________________________________________________
consensus             TTGGTTATCCATCGGTAACGTACCCGGCGTCAAGTTGCCACCATTCTGTTCAATGTAATG