Contig 009969:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005L14Sequence559012007 (5)ref|XP_009776620.1|7e-99PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A 759009969 (7)ref|XP_010094777.1|8e-120hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p
JMFF010O07Sequence561012007 (5)ref|XP_009776620.1|7e-99PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A 767009969 (7)ref|XP_010094777.1|3e-120hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p
JMFF017K22Sequence543012007 (5)emb|CDY03849.1|2e-58BnaC07g10740D [Brassica napus]774009969 (7)ref|XP_010094777.1|3e-120hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p
JMSF014E05Sequence472012007 (5)ref|XP_009776620.1|2e-89PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A 788009969 (7)ref|XP_010094777.1|3e-122hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p
JMSF023C01Sequence690012007 (5)ref|XP_009776620.1|5e-118PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A 791009969 (7)ref|XP_010094777.1|5e-119hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p
JMSF030P24Sequence690009969 (7)ref|XP_010094777.1|5e-77hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p
JMSF051I20Sequence619009969 (7)ref|XP_010094777.1|9e-125hypothetical protein L484_019987 [Morus notabilis] gb|EXB56942.1| hypothetical p

Alignment

This contig is upended


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rJMSF051I20+                                         GCCTGCTATAGTTGAACTTGCAGAAGATA
rJMFF017K22+                                                        ACTTGCAGAAGATA
rJMFF005L14+                                                           TGCAGAAGATA
rJMFF010O07+                                                        ACTTGCAGAAGATA
rJMSF014E05+                                              CTATAGTTGAACTTGCAGAAGATA
rJMSF023C01+                                                           TGCAGAAGATA
                      ____________________________________________________________
consensus                                            GCCTGCTATAGTTGAACTTGCAGAAGATA
 
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rJMSF051I20+          GACACTGGAGAGTGCGCCTAGCAATAATAGAGTACATACCTTTATTGGCCAGTCAGTTAG
rJMFF017K22+          GACACTGGAGAGTGCGCCTAGCAATAATAGAGTACATACCTTTATTGGCCAGTCAGTTAG
rJMFF005L14+          GACACTGGAGAGTGCGCCTAGCAATAATAGAGTACATACCTTTATTGGCCAGTCAGTTAG
rJMFF010O07+          GACACTGGAGAGTGCGCCTAGCAATAATAGAGTACATACCTTTATTGGCCAGTCAGTTAG
rJMSF014E05+          GACACTGGAGAGTGCGCCTAGCAATAATAGAGTACATACCTTTATTGGCCAGTCAGTTAG
rJMSF023C01+          GACACTGGAGAGTGCGCCTAGCAATAATAGAGTACATACCTTTATTGGCCGGTCAGTTAG
                      ____________________________________________________________
consensus             GACACTGGAGAGTGCGCCTAGCAATAATAGAGTACATACCTTTATTGGCCAGTCAGTTAG
 
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rJMSF051I20+          GCGTTGGGTTTTTTGATGATAAGCTCGGGGCCCTTTGCATGCAATGGCTGAAAGATAAGG
rJMFF017K22+          GCGTTGGGTTTTTTGATGATAAGCTCGGGGCCCTTTGCATGCAATGGCTGAAAGATAAGG
rJMFF005L14+          GCGTTGGGTTTTTTGATGATAAGCTCGGGGCCCTTTGCATGCAATGGCTGAAAGATAAGG
rJMFF010O07+          GCGTTGGGTTTTTTGATGATAAGCTCGGGGCCCTTTGCATGCAATGGCTGAAAGATAAGG
rJMSF030P24+                     TTTGATGATAAGCTCGGGGCCCTTTGCATGCAATGGCTGAAAGATAAGG
rJMSF014E05+          GCGTTGGGTTTTTTGATGATAAGCTCGGGGCCCTTTGCATGCAATGGCTGAAAGATAAGG
rJMSF023C01+          GCGTTGGGTTTTTTGATGATAAGCTCGGGGCCCTTTGCATGCAATGGCTGAAAGATAAGG
                      ____________________________________________________________
consensus             GCGTTGGGTTTTTTGATGATAAGCTCGGGGCCCTTTGCATGCAATGGCTGAAAGATAAGG
 
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rJMSF051I20+          TTTACTCCATCAGAGATGCGGCTGCAAATAATGTTAAGCGCCTTGCAGAGGAATTTGGAC
rJMFF017K22+          TTTACTCCATCAGAGATGCGGCTGCAAATAATGTTAAGCGCCTTGCAGAGGAATTTGGAC
rJMFF005L14+          TTTACTCCATCAGAGATGCGGCTGCAAATAATGTTAAGCGCCTTGCAGAGGAATTTGGAC
rJMFF010O07+          TTTACTCCATCAGAGATGCGGCTGCAAATAATGTTAAGCGCCTTGCAGAGGAATTTGGAC
rJMSF030P24+          TTTACTCCATCAGAGATGCGGCTGCAAATAATGTTAAGCGCCTTGCAGAGGAATTTGGAC
rJMSF014E05+          TTTACTCCATCAGAGATGCGGCTGCAAATAATGTTAAGCGCCTTGCAGAGGAATTTGGAC
rJMSF023C01+          TTTACTCCATCAGAGATGCGGCTGCAAATAATGTTAAGCGCCTTGCAGAGGAATTTGGAC
                      ____________________________________________________________
consensus             TTTACTCCATCAGAGATGCGGCTGCAAATAATGTTAAGCGCCTTGCAGAGGAATTTGGAC
 
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rJMSF051I20+          CAGAATGGGCAATGCAGCACATTATTCCACAGGTTCTGGAAATGATTAATGACCCACATT
rJMFF017K22+          CAGAATGGGCAATGCAGCACATTATTCCACAGGTTCTGGAAATGATTAATGACCCACATT
rJMFF005L14+          CAGAATGGGCAATGCAGCACATTATTCCACAGGTTCTGGAAATGATTAATGACCCACATT
rJMFF010O07+          CAGAATGGGCAATGCAGCACATTATTCCACAGGTTCTGGAAATGATTAATGACCCACATT
rJMSF030P24+          CAGAATGGGCAATGCAGCACATTATTCCACAGGTTCTGGAAATGATTAATGACCCACATT
rJMSF014E05+          CAGAATGGGCAATGCAGCACATTATTCCACAGGTTCTGGAAATGATTAATGACCCACATT
rJMSF023C01+          CAGAATGGGCAATGCAGCACATTATTCCACAGGTTCTGGAAATGATTAATGACCCACATT
                      ____________________________________________________________
consensus             CAGAATGGGCAATGCAGCACATTATTCCACAGGTTCTGGAAATGATTAATGACCCACATT
 
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rJMSF051I20+          ATCTTTATCGGATGACCATTCTTCATGCAGTATCTCTTCTTGCCCCAGTAATGGGCTCAG
rJMFF017K22+          ATCTTTATCGGATGACCATTCTTCATGCAGTATCTCTTCTTGCCCCAGTAATGGGCTCAG
rJMFF005L14+          ATCTTTATCGGATGACCATTCTTCATGCAGTATCTCTTCTTGCCCCAGTAATGGGCTCAG
rJMFF010O07+          ATCTTTATCGGATGACCATTCTTCATGCAGTATCTCTTCTTGCCCCAGTAATGGGCTCAG
rJMSF030P24+          ATCTTTATCGGATGACCATTCTTCATGCAGTATCTCTTCTTGCCCCAGTAATGGGCTCAG
rJMSF014E05+          ATCTTTATCGGATGACCATTCTTCATGCAGTATCTCTTCTTGCCCCAGTAATGGGCTCAG
rJMSF023C01+          ATCTTTATCGGATGACCATTCTTCATGCAGTATCTCTTCTTGCCCCAGTAATGGGCTCAG
                      ____________________________________________________________
consensus             ATCTTTATCGGATGACCATTCTTCATGCAGTATCTCTTCTTGCCCCAGTAATGGGCTCAG
 
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rJMSF051I20+          AAATCACTTGCAATAAACTTCTGCCAGTGATTATTACTGCATCGAAGGACAGGGTACCAA
rJMFF017K22+          AAATCACTTGCAATAAACTTCTGCCAGTGATTATTACTGCATCGAAGGACAGGGTACCAA
rJMFF005L14+          AAATCACTTGCAATAAACTTCTGCCAGTGATTATTACTGCATCGAAGGACAGGGTACCAA
rJMFF010O07+          AAATCACTTGCAATAAACTTCTGCCAGTGATTATTACTGCATCGAAGGACAGGGTACCAA
rJMSF030P24+          AAATCACTTGCAATAAACTTCTGCCAGTGATTATTACTGCATCGAAGGACAGGGTACCAA
rJMSF014E05+          AAATCACTTGCAATAAACTTCTGCCAGTGATTATTACTGCATCGAAGGACAGGGTACCAA
rJMSF023C01+          AAATCACTTGCAATAAACTTCTGCCAGTGATTATTACTGCATCGAAGGACAGGGTACCAA
                      ____________________________________________________________
consensus             AAATCACTTGCAATAAACTTCTGCCAGTGATTATTACTGCATCGAAGGACAGGGTACCAA
 
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rJMSF051I20+          ATATAAAGTTCAATGTGGCAAAGGTGTTGCAGTCTCTCATTCCTATAGTTGACCATTCTG
rJMFF017K22+          ATATAAAGTTCAATGTGGCAAAGGTGTTGCAGTCTCTCATTCCTATAGTTGACCATTCTG
rJMFF005L14+          ATATAAAGTTCAATGTGGCAAAGGTGTTGCAGTCTCTCATTCCTATAGTTGACCATTCTG
rJMFF010O07+          ATATAAAGTTCAATGTGGCAAAGGTGTTGCAGTCTCTCATTCCTATAGTTGACCATTCTG
rJMSF030P24+          ATATAAAGTTCAATGTGGCAAA-GTGTTGCAGTCTCTCATTCCTATAGTTGACCATTCTG
rJMSF014E05+          ATATAAAGTTCAATGTGGCAAAGGTGTTGCAGTCTCTCATTCCTATAGTTGACCATTCTG
rJMSF023C01+          ATATAAAGTTCAATGTGGCAAAGGTGTTGCAGTCTCTCATTCCTATAGTTGACCATTCTG
                      ____________________________________________________________
consensus             ATATAAAGTTCAATGTGGCAAAGGTGTTGCAGTCTCTCATTCCTATAGTTGACCATTCTG
 
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rJMSF051I20+          TTGTGGAGAAGACAATCCGTCCATGTTTGGTTGAGCTTAGCGAGGATCCAGACGTCGATG
rJMFF017K22+          TTGTGGAGAAGACAATCCGTCCATGTTTGGTTGAGCTTAGCGAGGATCCAGACGTCGATG
rJMFF005L14+          TTGTGGAGAAGACAATCCGTCCATGTTTGGTTGAGCTTAGCGAGGATCCAGACGTCGATG
rJMFF010O07+          TTGTGGAGAAGACAATCCGTCCATGTTTGGTTGAGCTTAGCGAGGATCCAGACGTCGATG
rJMSF030P24+          TTGTGGAGAAGACAATCCGTCCATGTTTGGTTGAGCTTAGCGAGGATCCAGACGTCGATG
rJMSF014E05+          TTGTGGAGAAGACAATCCGTCCATGTTTGGTTGAGCTTAGCGAGGATCCAGACGTCGATG
rJMSF023C01+          TTGTGGAGAAGACAATCCGTCCATGTTTGGTTGAGCTTAGCGAGGATCCAGACGTCGATG
                      ____________________________________________________________
consensus             TTGTGGAGAAGACAATCCGTCCATGTTTGGTTGAGCTTAGCGAGGATCCAGACGTCGATG
 
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rJMSF051I20+          TGAGATTCTTCGCCAACCAAGCACTGCAAGCCGCTGATCAAGTTATGATGTCGAGCTAAG
rJMFF017K22+          TGAGATTCTTCGCCAACCAAGCACTGCAAGCCGCTGATCAAGTTATGATGTCGAGCTAAG
rJMFF005L14+          TGAGATTCTTCGCCAACCAAGCACTGCAAGCCGCTGATCAAGTTATGATGTCGAGCTAAG
rJMFF010O07+          TGAGATTCTTCGCCAACCAAGCACTGCAAGCCGCTGATCAAGTTATGATGTCGAGCTAAG
rJMSF030P24+          TGAGATTCTTCGCCAACCAAGCACTGCAAGCCGCTGATCAAGTTATGATGTCGAGCTAAG
rJMSF014E05+          TGAGATTCTTCGCCAACCAAGCACTGCAAGCCGCTGATCAAGTTATGATGTCGAGCTAAG
rJMSF023C01+          TGAGATTCTTCGCCAACCAAGCACTGCAAGCCGCTGATCAAGTTATGATGTCGAGCTAAG
                      ____________________________________________________________
consensus             TGAGATTCTTCGCCAACCAAGCACTGCAAGCCGCTGATCAAGTTATGATGTCGAGCTAAG
 
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rJMSF051I20+          GCAACTTTATGCTTTGTTAGGAATTTGTTGTTTTACGCAATTTTATGCTG          
rJMFF017K22+          GCAACTTTATGCTTTGTTAGGAATTTGTTGTTTTACGCAATTTTATGCTGGTTAGGAAAT
rJMFF005L14+          GCAACTTTATGCTTTGTTAGGAATTTGTTGTTTTACGCAATTTTATGCTGGTTAGGAAAT
rJMFF010O07+          GCAACTTTATGCTTTGTTAGGAATTTGTTGTTTTACGCAATTTTATGCTGGTTAGGAAAT
rJMSF030P24+          GCAACTTTATGCTTTGTTAGGAATTTGTTGTTTTACGCAATTTTATGCTGGTTAGGAAAT
rJMSF014E05+          GCAACTTTATGCTTTGTTAGGAATTTGTTGTTTTACGCAATTTTATGCTGGTTAGGAAAT
rJMSF023C01+          GCAACTTTATGCTTTGTTAGGAATTTGTTGTTTTACGCAATTTTATGCTGGTTAGGAAAT
                      ____________________________________________________________
consensus             GCAACTTTATGCTTTGTTAGGAATTTGTTGTTTTACGCAATTTTATGCTGGTTAGGAAAT
 
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rJMFF017K22+          TGTTTGTTTTATGCTTTTTTGGTTGTCATTCAAAACCCCCCCTCCTCTCAGTACCAAGAC
rJMFF005L14+          TGTTTGTTTTATGCTTTTTTGGTTGTCATTCAAAACCCCCCCTCCTCTCAGTACCAAGAC
rJMFF010O07+          TGTTTGTTTTATGCTTTTTTGGTTGTCATTCAAAACCCCCCCTCCTCTCAGTACCAAGAC
rJMSF030P24+          TGTTTGTTTTATGCTTTTTTGGTTGTCATTCAAAACCCCCCCTCCTCTCAGTACCAAGAC
rJMSF014E05+          TGTTTGTTTTATGCTTTTTTGGTTGTCATTCAAAACCCCCCCTCCTCTCAGTACCAAGAC
rJMSF023C01+          TGTTTGTTTTATGCTTTTTTGGTTGTCATTCAAAACCCCCCCTCCTCTCAGTACCAAGAC
                      ____________________________________________________________
consensus             TGTTTGTTTTATGCTTTTTTGGTTGTCATTCAAAACCCCCCCTCCTCTCAGTACCAAGAC
 
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rJMFF017K22+          TGCTTCCATCCATCTGTAATGACTGATTAACTGGCATACTTGAAGGGGAAAAGTGAGATA
rJMFF005L14+          TGCTTCCATCCATCTGTAATGACTGATTAACTGGCATACTTGAAGGGGAAAAGTGAGATA
rJMFF010O07+          TGCTTCCATCCATCTGTAATGACTGATTAACTGGCATACTTGAAGGGGAAAAGTGAGATA
rJMSF030P24+          TGCTTCCATCCATCTGTANTGACTGATTAACTGGCATACTNGAAGGGGAAAAGTGAGATA
rJMSF014E05+          TGCTTCCATCCATCTGTAATGACTGATTAACTGGCATACTTGAAGGGGAAAAGTGAGATA
rJMSF023C01+          TGCTTCCATCCATCTGTAATGACTGATTAACTGGCATACTTGAAGGGGAAAAGTGAGATA
                      ____________________________________________________________
consensus             TGCTTCCATCCATCTGTAATGACTGATTAACTGGCATACTTGAAGGGGAAAAGTGAGATA
 
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rJMFF017K22+          CTTTTGGTCCTTTCCTCTTCAGGATATTATGCATGCTCGA                    
rJMFF005L14+          CTTTTGGTCCTTTCCTCTTCAGGATATT                                
rJMFF010O07+          CTTTTGGTCCTTTCCTCTTCAGGATATTATGC                            
rJMSF030P24+          CTTTTGGTCCTTTCCTCTTCAGGATATTATGCATGCTCGA                    
rJMSF014E05+          CTTTTGGTCCTTTCCTCTTCAGGATATTATGCATGCTCGA                    
rJMSF023C01+          CTTTTGGTCCTTTCCTCTTCAGGATATTATGCATGCTCGATGAGTATATCCGTTTGTCNA
                      ____________________________________________________________
consensus             CTTTTGGTCCTTTCCTCTTCAGGATATTATGCATGCTCGATGAGTATATCCGTTTGTCNA