Contig 009963:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021D02Sequence683003657 (2)751009963 (2)ref|XP_006367645.1|2e-82PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Solanum tuberosum]
JMSF031O01Sequence630003657 (2)ref|XP_009793291.1|3e-63PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Nicotiana sylvestris]697009963 (2)ref|XP_006367645.1|3e-71PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF021D02+                                       TTATGGGCTGCTGATCTCGGGTCTGACTTCA
                      ____________________________________________________________
consensus                                          TTATGGGCTGCTGATCTCGGGTCTGACTTCA
 
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rJMSF031O01+                              ACCATAGATTTCGCCTCTGTTCATGTATACCCAGATCATT
rJMSF021D02+          TTCGGAATTCAAATCTCTCGACCATAGATTTCGCCTCTGTTCATGTATACCCAGATCATT
                      ____________________________________________________________
consensus             TTCGGAATTCAAATCTCTCGACCATAGATTTCGCCTCTGTTCATGTATACCCAGATCATT
 
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rJMSF031O01+          GGTTCAAGAATCAAACTTTTCAAGACAAATTGAAGTTTACGANGAAGTGGATCCTTTCCC
rJMSF021D02+          GGTTCAAGAATCAAACTTTTCAAGACAAATTGAAGTTTACGAAGAAGTGGATCCTTTCCC
                      ____________________________________________________________
consensus             GGTTCAAGAATCAAACTTTTCAAGACAAATTGAAGTTTACGAAGAAGTGGATCCTTTCCC
 
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rJMSF031O01+          ACATCGAAGATGGCGAGAGGGCACTGAAAAAGCCTATCATGTTCACCGAATTTGGATTGG
rJMSF021D02+          ACATCGAAGATGGCGAGAGGGCACTGAAAAAGCCTATCATGTTCACCGAATTTGGATTGG
                      ____________________________________________________________
consensus             ACATCGAAGATGGCGAGAGGGCACTGAAAAAGCCTATCATGTTCACCGAATTTGGATTGG
 
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rJMSF031O01+          CAGGTGAAACCAAGGAAGTTGAGCCATACCAACGCGACAGATTCTTCAAGCTTATTCTCG
rJMSF021D02+          CAGGTGAAACCAAGGAAGTTGAGCCATACCAACGCGACAGATTCTTCAAGCTTATTCTCG
                      ____________________________________________________________
consensus             CAGGTGAAACCAAGGAAGTTGAGCCATACCAACGCGACAGATTCTTCAAGCTTATTCTCG
 
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rJMSF031O01+          AGATCATGTACAAGTCTGCAAAGCACAACAAATCCGGGGCGGGGTCCGTCTTCTGGCAGT
rJMSF021D02+          AGATCATGTACAAGTCTGCAAAGCACAACAAATCCGGGGCGGGGTCCGTCTTCTGGCAGT
                      ____________________________________________________________
consensus             AGATCATGTACAAGTCTGCAAAGCACAACAAATCCGGGGCGGGGTCCGTCTTCTGGCAGT
 
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rJMSF031O01+          TCCTCGTGGAAAGGATGGAAGAGTACAACGACGAGTTTGGCATCGTTCCTTGGGAGAGGG
rJMSF021D02+          TCCTCGTGGAAAGGATGGAAGAGTACAACGACGAGTTTGGCATCGTTCCTTGGGAGAGGG
                      ____________________________________________________________
consensus             TCCTCGTGGAAAGGATGGAAGAGTACAACGACGAGTTTGGCATCGTTCCTTGGGAGAGGG
 
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rJMSF031O01+          CATCGACGTATAATCTCATCACCAACCACTCGTGTAGGCTTGCCGGAGTTCATGGTGTGC
rJMSF021D02+          CATCGACGTATAATCTCATCACCAACCACTCGTGTAGGCTTGCCGGAGTTCATGGTGTGC
                      ____________________________________________________________
consensus             CATCGACGTATAATCTCATCACCAACCACTCGTGTAGGCTTGCCGGAGTTCATGGTGTGC
 
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rJMSF031O01+          TGCCTTCTCAGCAGGAACATTTGAAAAGCTTCTGTTCCAAGACACAATAATCTTATGAGT
rJMSF021D02+          TGCCTTCTCAGCAGGAACATTTGAAAAGCTTCTGTTCCAAGACACAATAATCTTATGAGT
                      ____________________________________________________________
consensus             TGCCTTCTCAGCAGGAACATTTGAAAAGCTTCTGTTCCAAGACACAATAATCTTATGAGT
 
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rJMSF031O01+          TTGTTTGTTTAGGCAGAAAATGATCAGGTTCATAACTTCATACTGTCATTATATTTATAT
rJMSF021D02+          TTGTTTGTTTAGGCAGAAAATGATCAGGTTCATAACTTCATACTGTCATTATATTTATAT
                      ____________________________________________________________
consensus             TTGTTTGTTTAGGCAGAAAATGATCAGGTTCATAACTTCATACTGTCATTATATTTATAT
 
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rJMSF031O01+          ATATAGGTAAAAGAGAAATTTGGTTAGTTTGTTTTTGGTTTATGCTTTTGTGTTTTGAGG
rJMSF021D02+          ATATAGGTAAAAGAGAAATTTGGTTAGTTTGTTTTTGGTTTATGCTTTTGTGTTTTGAGG
                      ____________________________________________________________
consensus             ATATAGGTAAAAGAGAAATTTGGTTAGTTTGTTTTTGGTTTATGCTTTTGTGTTTTGAGG
 
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rJMSF031O01+          TTGAGGTTGTCCTAGGTTATAGGCCATTGTTTTGTGCCCATGGAGATTTGGCATTTGCAG
rJMSF021D02+          TTGAGGTTGTCCTAGGTTATAGGCCATTGTTTTGTGCCCATGGAGATTTGGCATTTGCAG
                      ____________________________________________________________
consensus             TTGAGGTTGTCCTAGGTTATAGGCCATTGTTTTGTGCCCATGGAGATTTGGCATTTGCAG
 
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rJMSF031O01+          ATTTGTGCAGAATGCACCCATGGCAATTTGTCATACAATGCAGCTGTAAAACTACTA   
rJMSF021D02+          ATTTGTGCAGAATGCACCCATGGCAATTTGTCATACAATGCAGCTGTAAAACTACTACCC
                      ____________________________________________________________
consensus             ATTTGTGCAGAATGCACCCATGGCAATTTGTCATACAATGCAGCTGTAAAACTACTACCC