Contig 009955:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009N03Sequence598016255ref|XP_002511301.1|3e-98afc, putative [Ricinus communis] gb|EEF51903.1| afc, putative [Ricinus communis]735009955 (4)ref|XP_010319028.1|1e-96PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Solanum lycopersicu
JMFF022M08Sequence466012205 (3)gb|KCW83274.1|6e-67hypothetical protein EUGRSUZ_B00211 [Eucalyptus grandis]737009955 (4)ref|XP_010319028.1|5e-98PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Solanum lycopersicu
JMFF034J08Sequence569012205 (3)ref|XP_002511301.1|5e-92afc, putative [Ricinus communis] gb|EEF51903.1| afc, putative [Ricinus communis]705009955 (4)ref|XP_006439952.1|4e-93hypothetical protein CICLE_v10020223mg [Citrus clementina] gb|ESR53192.1| hypoth
JMSF019M14Sequence668009955 (4)ref|XP_006439952.1|2e-58hypothetical protein CICLE_v10020223mg [Citrus clementina] gb|ESR53192.1| hypoth

Alignment

This contig is upended


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rJMFF034J08+                                     TCCACACGTCATTACCGGGCACCAGAAGTCATT
rJMFF022M08+            CCGTGAGAATCAAACCTATATTGTATCCACACGTCATTACCGGGCACCAGAAGTCATT
rJMFF009N03+                 AGAATCAAACCTATATNGTATCCACACGTCATTACCGGGCACCAGAAGTCATT
                      ____________________________________________________________
consensus               CCGTGAGAATCAAACCTATATTGTATCCACACGTCATTACCGGGCACCAGAAGTCATT
 
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rJMFF034J08+          TTAGGTCTTGGATGGACCTATCCATGTGATATATGGAGTGTTGGTTGTATCCTTGTGGAG
rJMFF022M08+          TTAGGTCTTGGATGGACCTATCCATGTGATATATGGAGTGTTGGTTGTATCCTTGTGGAG
rJMFF009N03+          TTAGGTCTTGGATGGACCTATCCATGTGATATATGGAGTGTTGGTTGTATCCTTGTGGAG
rJMSF019M14+                                                              TTGTGGAG
                      ____________________________________________________________
consensus             TTAGGTCTTGGATGGACCTATCCATGTGATATATGGAGTGTTGGTTGTATCCTTGTGGAG
 
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rJMFF034J08+          CTATGCTCGGGAGAAGCATTATTCCAAACTCATGAGAATTTAGAGCACCTAGCTATGATG
rJMFF022M08+          CTATGCTCGGGAGAAGCATTATTCCAAACTCATGAGAATTTAGAGCACCTAGCTATGATG
rJMFF009N03+          CTATGCTCGGGAGAAGCATTATTCCAAACTCATGAGAATTTAGAGCACCTAGCTATGATG
rJMSF019M14+          CTATGCTCGGGAGAAGCATTATTCCANACTCATGAGAATTNAGAGCACCTANCTATGATG
                      ____________________________________________________________
consensus             CTATGCTCGGGAGAAGCATTATTCCAAACTCATGAGAATTTAGAGCACCTAGCTATGATG
 
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rJMFF034J08+          GAGAGGGTGCTTGGTCCTATGCCACTGCACATGTTAAAGAGAGTAGATCGGCATGCAGAG
rJMFF022M08+          GAGAGGGTGCTTGGTCCTATGCCACTGCACATGTTAAAGAGAGTAGATCGGCATGCAGAG
rJMFF009N03+          GAGAGGGTGCTTGGTCCTATGCCACTGCACATGTTAAAGAGAGTAGATCGGCATGCAGAG
rJMSF019M14+          GAGAGGGTGCTTGGTCCTATGCCACTGCACATGTTNAAGAGAGTANATCGGCATGCAGAG
                      ____________________________________________________________
consensus             GAGAGGGTGCTTGGTCCTATGCCACTGCACATGTTAAAGAGAGTAGATCGGCATGCAGAG
 
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rJMFF034J08+          AAATATCTTAGAAAGGGAATGCTGGATTGGCCTGAAGGTGCAGCATCAAGAGAAAGTATC
rJMFF022M08+          AAATATCTTAGAAAGGGAATGCTGGATTGGCCTGAAGGTGCAGCATCAAGAGAAAGTATC
rJMFF009N03+          AAATATCTTAGAAAGGGAATGCTGGATTGGCCTGAAGGTGCAGCATCAAGAGAAAGTATC
rJMSF019M14+          AAATATCTTNGAANGGGAATGCTGGATTNGCCNGAAGGTGCAGCATCAAGAGAAAGTATC
                      ____________________________________________________________
consensus             AAATATCTTAGAAAGGGAATGCTGGATTGGCCTGAAGGTGCAGCATCAAGAGAAAGTATC
 
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rJMFF034J08+          AGAACTGTTCTTAAATTACCTCGGCTTCAGAACCTCGTGATGCAGCATGTAGACCATTCC
rJMFF022M08+          AGAACTGTTCTTAAATTACCTCGGCTTCAGAACCTCGTGATGCAGCATGTAGACCATTCC
rJMFF009N03+          AGAACTGTTCTTAAATTACCTCGGCTTCAGAACCTCGTGATGCAGCATGTAGACCATTCC
rJMSF019M14+          AGAACTGTTCTTAAATTACCTCGGCTTCAGAACCTCGTGATGCAGCATGTAGACCATTCC
                      ____________________________________________________________
consensus             AGAACTGTTCTTAAATTACCTCGGCTTCAGAACCTCGTGATGCAGCATGTAGACCATTCC
 
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rJMFF034J08+          GCTGGGGATCTTATTAATCTTTTGCAAGGATTACTTAGATATGACCCTTCAGAGAGGCTT
rJMFF022M08+          GCTGGGGATCTTATTAATCTTTTGCAAGGATTACTTAGATATGACCCTTCAGAGAGGCTT
rJMFF009N03+          GCTGGGGATCTTATTAATCTTTTGCAAGGATTACTTAGATATGACCCTTCAGAGAGGCTT
rJMSF019M14+          GCTGGGGATCTTATTAATCTTNTGCAAGGATTACTTAGATATGNCCCTTCAGAGAGGCTT
                      ____________________________________________________________
consensus             GCTGGGGATCTTATTAATCTTTTGCAAGGATTACTTAGATATGACCCTTCAGAGAGGCTT
 
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rJMFF034J08+          ACTGCTCGGGAAGCCTTGCAGCATCCCTTCTTCTCAAGGGACCATCTTAGGAGATTGTGA
rJMFF022M08+          ACTGCTCGGGAAGCCTTGCAGCATCCCTTCTTCTCAAGGGACCATCTTAGGAGATTGTGA
rJMFF009N03+          ACTGCTCGGGAAGCCTTGCAGCATCCCTTCTTCTCAAGGGACCATCTTAGGAGATTGTGA
rJMSF019M14+          ACNGCTCGGGAAGCCTTGCAGCATCCCTTCTTCTCAAGGGACCATCTTNGGAGATTGTGA
                      ____________________________________________________________
consensus             ACTGCTCGGGAAGCCTTGCAGCATCCCTTCTTCTCAAGGGACCATCTTAGGAGATTGTGA
 
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rJMFF034J08+          GACTGAGTAATTAAGAGCTTTGTTTTATGTGAGTATGATTCTGGCAAAAGCTAGACTACT
rJMFF022M08+          GACTGAGTAATTAAGAGCTTTGTTTTATGTGAGTATGATTCTGGCAAAAGCTAGACTACT
rJMFF009N03+          GACTGAGTAATTAAGAGCTTTGTTTTATGTGAGTATGATTCTGGCAAAAGCTAGACTACT
rJMSF019M14+          GACTGAGTAATTAAGAGCTTTNTNTTATGTGAGTATGATTCTGGCAAAAGCTNGACTACT
                      ____________________________________________________________
consensus             GACTGAGTAATTAAGAGCTTTGTTTTATGTGAGTATGATTCTGGCAAAAGCTAGACTACT
 
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rJMFF034J08+          TGTGTGAAGCACCACCTTAGCCGCCTGATTAGGTTATATTTCATGAAGTTGGTGGTTTAA
rJMFF022M08+          TGTGTGAAGCACCACCTTAGCCGCCTGATTAGGTTATATTTCATGAAGTTGGTGGTTTAA
rJMFF009N03+          TGTGTGAAGCACCACCTTAGCCGCCTGATTAGGTTATATTTCATGAAGTTGGTGGTTTAA
rJMSF019M14+          TGNGTGAAGCACCACCTTAGCCNCCNGATTNGGNTATATTTCANGAAGCTGGTGGTCTAA
                      ____________________________________________________________
consensus             TGTGTGAAGCACCACCTTAGCCGCCTGATTAGGTTATATTTCATGAAGTTGGTGGTTTAA
 
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rJMFF034J08+          GGTATGCATTCCAAGGGAGTTGGGTAGAGCTTGTGTAAATAGGGATGATGTCCTCTGTTA
rJMFF022M08+          GGTATGCATTCCAAGGGAGTTGGGTAGAGCTTGTGTAAATAGGGATGATGTCCTCTGTTA
rJMFF009N03+          GGTATGCATTCCAAGGGAGTTGGGTAGAGCTTGTGTAAATAGGGATGATGTCCTCTGTTA
rJMSF019M14+          GGTATGCATTCCAAGGGAGTTGGGTAGAGCTTGTGTAAATAGGGATGATGTCCTCTGTTA
                      ____________________________________________________________
consensus             GGTATGCATTCCAAGGGAGTTGGGTAGAGCTTGTGTAAATAGGGATGATGTCCTCTGTTA
 
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rJMFF034J08+          ACTACATTCTTGGATAGAGTACGTGCATAATAGTTAACACTGCCTTGACCAGCTAATTTG
rJMFF022M08+          ACTACATTCTTGGATAGAGTACGTGCATAATAGTTAACACTGCCTTGACCAGCTAATTTG
rJMFF009N03+          ACTACATTCTTGGATAGAGTACGTGCATAATAGTTAACACTGCCTTGACCAGCTAATTTG
rJMSF019M14+          ACTACATTCCTGGNTAGAGNACGTGCATAATAGTTAACACTGCCTTGACCANCTAATTTG
                      ____________________________________________________________
consensus             ACTACATTCTTGGATAGAGTACGTGCATAATAGTTAACACTGCCTTGACCAGCTAATTTG
 
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rJMFF034J08+          TGTGTAGATTAA                                                
rJMFF022M08+          TGTGTAGATTAA                                                
rJMFF009N03+          TGTGTAGATTAATGGAGTA                                         
rJMSF019M14+          TGTGTAGATTAATGGAGTATTACTCTTTTATTNTCCAAAGCGACTCCAGTTGCATGTCTT
                      ____________________________________________________________
consensus             TGTGTAGATTAATGGAGTATTACTCTTTTATTNTCCAAAGCGACTCCAGTTGCATGTCTT