Contig 009954:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001J13Sequence542012806 (3)dbj|BAA13440.1|1e-62calcium dependent protein kinase [Ipomoea batatas]683009954 (5)dbj|BAA13440.1|1e-84calcium dependent protein kinase [Ipomoea batatas]
JMFF031D22Sequence488012806 (3)dbj|BAA13440.1|5e-63calcium dependent protein kinase [Ipomoea batatas]786009954 (5)dbj|BAA13440.1|2e-117calcium dependent protein kinase [Ipomoea batatas]
JMSF019J19Sequence481013333 (7)ref|XP_009765293.1|1e-49PREDICTED: stem-specific protein TSJT1-like [Nicotiana sylvestris]788009954 (5)dbj|BAA13440.1|8e-99calcium dependent protein kinase [Ipomoea batatas]
JMSF025P22Sequence211014676781009954 (5)emb|CDP05759.1|3e-133unnamed protein product [Coffea canephora]
JMSF052J10Sequence676012806 (3)dbj|BAA13440.1|1e-85calcium dependent protein kinase [Ipomoea batatas]906009954 (5)dbj|BAA13440.1|1e-148calcium dependent protein kinase [Ipomoea batatas]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025P22+                     CGAGTAGTGCCAAGGACCTGGTACGAAGGATGCTAACGGAAGATCCAAA
rJMSF052J10+                                                                 CCAAA
                      ____________________________________________________________
consensus                        CGAGTAGTGCCAAGGACCTGGTACGAAGGATGCTAACGGAAGATCCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025P22+          GAGACGCATTACTGCTGCTCAAGTTCTTGAGCATCCATGGATGAGAGGA---GGAGAAGC
rJMSF052J10+          GAGACGCCTTACTGCTGCCCAGGTTCTTGAGCATCCATGGATGCGAGAAGATGGAGAAGC
                      ____________________________________________________________
consensus             GAGACGCCTTACTGCTGCTCAGGTTCTTGAGCATCCATGGATGCGAGGAGATGGAGAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025P22+          GTCTGATAAACCAATAGACAGTGCAGTCCTCTCGAGAATGAAGCAATTCAGAGCGATGAA
rJMFF031D22+                                       TCTCAAGAATGAAGCAATTCAGAGCAATGAA
rJMSF052J10+          ATCTGACAGACCACTAGATAGCGCTGTCCTCTCAAGAATGAAGCAATTCAGAGCAATGAA
                      ____________________________________________________________
consensus             GTCTGATAGACCACTAGATAGTGCTGTCCTCTCAAGAATGAAGCAATTCAGAGCAATGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025P22+          CAAACTCAAAAAGCTTGCCCTTAAGGTAATTGCAGAAAATCTCTCGGCAGAAGAAATCCA
rJMFF031D22+          CAAACTCAAAAAACTTGCCCTGAAGTTTATTGCAGAAAATCTCTCGGAAGAAGAAATTCA
rJMSF052J10+          CAAACTCAAAAAACTTGCCCTGAAGTTTATTGCAGAAAATCTCTCGGAAGAAGAAATTCA
rJMSF019J19+            AACTCAAAAAACTTGCCCTGAAGTTTATTGCAG-AAATCTCTCGGAAGAAGAAATTCA
                      ____________________________________________________________
consensus             CAAACTCAAAAAACTTGCCCTGAAGTTTATTGCAGAAAATCTCTCGGAAGAAGAAATTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025P22+          GGGGCTGAAATCTATGTTCATGAACATGGATACCGATAAGAGTGGCACGATTACATATGA
rJMFF031D22+          TGGACTGAAAGCAATGTTCACGAATATCGACACTGACAACAGTGGTACAATTACGTACGA
rJMSF052J10+          TGGACTGAAAGCAATGTTCACGAATATCGACACTGACAACAGTGGTACAATTACGTACGA
rJMFF001J13+                                       ACACTGACACCAGTGGTACAATTACGTACGA
rJMSF019J19+          TGGACTGAAAGCAATGTTCACGAATATCGACACTGACAACAGTGGTACAATTACGTACGA
                      ____________________________________________________________
consensus             TGGACTGAAAGCAATGTTCACGAATATCGACACTGACAACAGTGGTACAATTACGTACGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025P22+          AGAGCTGAAGACTGGATTGGCTAAACTCGGGTCCAAGCTCACAGAATCTGAAGTCAAGCA
rJMFF031D22+          AGAACTGAAGAAGGGATTGGCCCAACTCGGGGCAAATCTCACAGAGGCTGAAGTTAAGCA
rJMSF052J10+          AGAACTGAAGAAGGGATTGGCCCAACTCGGGGCAAATCTCACAGAGGCTGAAGTTAAGCA
rJMFF001J13+          AGAACTGAAGAAGGGATTGGCCCAACTCGGGGCAAATCTCACAGAGGCTGAAGTTAAGCA
rJMSF019J19+          AGAACTGAAGAAGGGATTGGCCCAACTCGGGGCAAATCTCACAGAGGCTGAAGTTAAGCA
                      ____________________________________________________________
consensus             AGAACTGAAGAAGGGATTGGCCCAACTCGGGGCAAATCTCACAGAGGCTGAAGTTAAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025P22+          GTTGATGGAAGCTGCAGATGTGGATGGAGATGGCTCAATTGACTATATAGAATTCATCAC
rJMFF031D22+          GTTGATGGAAGCTGCTGATGTAGATGGAAATGGCTCGATAGACTACATCGAATTCATCAC
rJMSF052J10+          GTTGATGGAAGCTGCTGATGTAGATGGAAATGGCTCGATAGACTACATCGAATTCATCAC
rJMFF001J13+          GTTGATGGAAGCTGCTGATGTAGATGGAAATGGCTCGATAGACTACATCGAATTCATCAC
rJMSF019J19+          GTTGATGGAAGCTGCTGATGTAGATGGAAATGGCTCGATAGACTACATCGAATTCATCAC
                      ____________________________________________________________
consensus             GTTGATGGAAGCTGCTGATGTAGATGGAAATGGCTCGATAGACTACATCGAATTCATCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025P22+          TGCTACAATGCACAAACACAGGCTAGAAAGAGAAGAGAATCTATACAAAGCATTTCAGTA
rJMFF031D22+          TGCTACAATGCACAAGCACAGGCTAGAAAGAGAAGAGAATCTATACAAAGCGTTTCAGTA
rJMSF052J10+          TGCTACAATGCACAAGCACAGGCTAGAAAGAGAAGAGAATCTATACAAAGCGTTTCAGTA
rJMFF001J13+          TGCTACAATGCACAAGCACAGGCTAGAAAGAGAAGAGAATCTATACAAAGCGTTTCAGTA
rJMSF019J19+          TGCTACAATGCACAAGCACAGGCTAGAAAGAGAAGAGAATCTATACAAAGCGTTTCAGTA
                      ____________________________________________________________
consensus             TGCTACAATGCACAAGCACAGGCTAGAAAGAGAAGAGAATCTATACAAAGCGTTTCAGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025P22+          TTTTGATAAAGATAGTAGTGGGTTTATAACTCGAGATGAACTGCAAACAGCTCTGAAGGA
rJMFF031D22+          TTTTGATAAAGATAGCAGCGGATTTATCACGAGAGATGAACTCGAGACTGCTATGAAGGA
rJMSF052J10+          TTTTGATAAAGATAGCAGCGGATTTATCACGAGAGATGAACTCGAGACTGCTATGAAGGA
rJMFF001J13+          TTTTGATAAAGATAGCAGCGGATTTATCACGAGAGATGAACTCGAGACTGCTATGAAGGA
rJMSF019J19+          TTTTGATAAAGATAGCAGCGGATTTATCACGAGAGATGAACTCGAGACTGCTATGAAGGA
                      ____________________________________________________________
consensus             TTTTGATAAAGATAGCAGCGGATTTATCACGAGAGATGAACTCGAGACTGCTATGAAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025P22+          ACATGGAATAGCTGATGCAGAAACTATAAAAGAGATTATAGCTGAAGTGGATATAGACAA
rJMFF031D22+          ACACGGAATAGCTGATGCAGCAACTATAAAGGAAATAATATCTGAAGTCGATGCAGATCA
rJMSF052J10+          ACACGGAATAGCTGATGCAGCAACTATAAAGGAAATAATATCTGAAGTCGATGCAGATCA
rJMFF001J13+          ACACGGAATAGCTGATGCAGCAACTATAAAGGAAATAATATCTGAAGTCGATGCAGATCA
rJMSF019J19+          ACACGGAATAGCTGATGCAGCAACTATAAAGGAAATAATATCTGAAGTCGATGCAGATCA
                      ____________________________________________________________
consensus             ACACGGAATAGCTGATGCAGCAACTATAAAGGAAATAATATCTGAAGTCGATGCAGATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF025P22+          TGATGGAACCATCAACTATGAAGAGTTCTGCACCATGATGAGAACTGGAAGCAAACAGC 
rJMFF031D22+          TGATGGAAGAATCAACTATGAAGAGTTTTGCACAATGATGAGATCAGGAACCAAACAGCA
rJMSF052J10+          TGATGGAAGAATCAACTATGAAGAGTTTTGCACAATGATGAGATCAGGAACCAAACAGCA
rJMFF001J13+          TGATGGAAGAATCAACTATGAAGAGTTTTGCACAATGATGAGATCAGGAACCAAACAGCA
rJMSF019J19+          TGATGGAAGAATCAACTATGAAGAGTTTTGCACAATGATGAGATCAGGAACCAAACAGCA
                      ____________________________________________________________
consensus             TGATGGAAGAATCAACTATGAAGAGTTTTGCACAATGATGAGATCAGGAACCAAACAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF031D22+          ACCCAAGCTGTTCGATCTAACACTGTAAGCCTGCATGTCATGAAACCATCGTCTGCAGTT
rJMSF052J10+          ACCCAAGCTGTTCGATCTAACACTGTAAGCCTGCATGTCATGAAACCATCGTCTGCAGTT
rJMFF001J13+          ACCCAAGCTGTTCGATCTAACACTGTAAGCCTGCATGTCATGAAACCATCGTCTGCAGTT
rJMSF019J19+          ACCCAAGCTGTTCGATCTAACACTGTAAGCCTGCATGTCATGAAACCATCGTCTGCAGTT
                      ____________________________________________________________
consensus             ACCCAAGCTGTTCGATCTAACACTGTAAGCCTGCATGTCATGAAACCATCGTCTGCAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF031D22+          TGCAGTTCCGCTCAAGCCGACTTGCAATCTGTAGACCTCTAACTGTTGCCTTATCTTTAA
rJMSF052J10+          TGCAGTTCCGCTCAAGCCGACTTGCAATCTGTAGACCTCTAACTGTTGCCTTATCTTTAA
rJMFF001J13+          TGCAGTTCCGCTCAAGCCGACTTGCAATCTGTAGACCTCTAACTGTTGCCTTATCTTTAA
rJMSF019J19+          TGCAGTTCCGCTCAAGCCGACTTGCAATCTGTAGACCTCTAACTGTTGCCTTATCTTTAA
                      ____________________________________________________________
consensus             TGCAGTTCCGCTCAAGCCGACTTGCAATCTGTAGACCTCTAACTGTTGCCTTATCTTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF031D22+          TGTTGACATCTGTGTCTGATGTAGAATTTAACTTTGTTGTCTTCTCAGCTAAGTTTATGT
rJMSF052J10+          TGTTGACATCTGTGTCTGATGTAGAATTTAACTTTGTTGTCTTCTCAGCTAAGTTTATGT
rJMFF001J13+          TGTTGACATCTGTGTCTGATGTAGAATTTAACTTTGTTGTCTTCTCAGCTAAGTTTATGT
rJMSF019J19+          TGTTGACATCTGTGTCTGATGTAGAATTTAACTTTGTTGTCTTCTCAGCTAAGTTTATGT
                      ____________________________________________________________
consensus             TGTTGACATCTGTGTCTGATGTAGAATTTAACTTTGTTGTCTTCTCAGCTAAGTTTATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF031D22+          TGGAGTTAATGGCTACACTCTTGTAAAAGCTTGGGCATTTGTAATTTTTCTTTGGTGTCT
rJMSF052J10+          TGGAGTTAATGGCTACACTCTTGTAAAAGCTTGGGCATTTGTAATTTTTCTTTGGTGTCT
rJMFF001J13+          TGGAGTTAATGGCTACACTCTTGTAAAAGCTTGGGCATTTGTAATTTTTCTTTGGTGTCT
rJMSF019J19+          TGGAGTTAATGGCTACACTCTTGTAAAAGCTTGGGCATTTGTAATTTTTCTTTGGTGTCT
                      ____________________________________________________________
consensus             TGGAGTTAATGGCTACACTCTTGTAAAAGCTTGGGCATTTGTAATTTTTCTTTGGTGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF031D22+          AAATTGTGCAAAGGCAAT                                          
rJMSF052J10+          AAATTGTGCAAAGGCAATCACTCTCTAGCCACTTAT                        
rJMFF001J13+          AAATTGTGCAAAGGCAATCACTCTCTAGCCACTTATGATTGTTGAACAGATT        
rJMSF019J19+          AAATTGTGCAAAGGCAATCACTCTCTAGCCACTTATGATTGTTGAACAGATTTGAATCAT
                      ____________________________________________________________
consensus             AAATTGTGCAAAGGCAATCACTCTCTAGCCACTTATGATTGTTGAACAGATTTGAATCAT