Contig 009953:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019H24+                                                            CACATGAACT
                      ____________________________________________________________
consensus                                                               CACATGAACT
 
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rJMSF019H24+          TTCTGAAACACTATTGGGAAGGTGACGAGGAGGAGAAGAAGGAAATGAAAACGCAGCTGT
                      ____________________________________________________________
consensus             TTCTGAAACACTATTGGGAAGGTGACGAGGAGGAGAAGAAGGAAATGAAAACGCAGCTGT
 
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rJMSF019H24+          TTGCTGCAGATCCTCCAGTCCTGTATGTTCTTCACTATTTAGGGTTGAAACCGTGGCTAT
                      ____________________________________________________________
consensus             TTGCTGCAGATCCTCCAGTCCTGTATGTTCTTCACTATTTAGGGTTGAAACCGTGGCTAT
 
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rJMSF006K11+                               ACTGGAATGTTGAGAAATTGCACGAGTTTGCAAGTGATG
rJMSF019H24+          GCTTCCGCGACTATGATTGCAACTGGAATGTTGAGAAATTGCACGAGTTTGCAAGTGATG
                      ____________________________________________________________
consensus             GCTTCCGCGACTATGATTGCAACTGGAATGTTGAGAAATTGCACGAGTTTGCAAGTGATG
 
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rJMSF006K11+          TTGCGCATAGGACATGGTGGAAAATCCACGATGCAATGCCGGAGAACTTGCACAAGTACT
rJMSF019H24+          TTGCGCATAGGACATGGTGGAAAATCCACGATGCAATGCCGGAGAACTTGCACAAGTACT
                      ____________________________________________________________
consensus             TTGCGCATAGGACATGGTGGAAAATCCACGATGCAATGCCGGAGAACTTGCACAAGTACT
 
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rJMSF006K11+          GCTTGCTTAGATCCAAACAGAAGGCGGCCTTGGAGTGGGATCGAAGGGAAGCCGAGAAAG
rJMSF019H24+          GCTTGCTTAGATCCAAACAGAAGGCGGCCTTGGAGTGGGATCGAAGGGAAGCCGAGAAAG
                      ____________________________________________________________
consensus             GCTTGCTTAGATCCAAACAGAAGGCGGCCTTGGAGTGGGATCGAAGGGAAGCCGAGAAAG
 
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rJMSF006K11+          GTAACTACACAGATGGCCATTGGAAGGTCAAGATAAAAGACCCGCGATTACAGATATGTT
rJMSF019H24+          GTAACTACACAGATGGCCATTGGAAGGTCAAGATAAAAGACCCGCGATTACAGATATGTT
                      ____________________________________________________________
consensus             GTAACTACACAGATGGCCATTGGAAGGTCAAGATAAAAGACCCGCGATTACAGATATGTT
 
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rJMSF006K11+          TTGAAGATTTTTGCTTCTGGGAGAGCATGCTATGGCACTGGGGAGAAACAAATTGGACAG
rJMSF019H24+          TTGAAGATTTTTGCTTCTGGGAGAGCATGCTATGGCACTGGGGAGAAACAAATTGGACAG
                      ____________________________________________________________
consensus             TTGAAGATTTTTGCTTCTGGGAGAGCATGCTATGGCACTGGGGAGAAACAAATTGGACAG
 
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rJMSF006K11+          ATAATTCAACTTCTACTCCAACACCACCTATGGTTAAAACTGTTTCGCTCTCGTCTTTAT
rJMSF019H24+          ATAATTCAACTTCTACTCCAACACCACCTATGGTTAAAACTGTTTCGCTCTCGTCTTTAT
                      ____________________________________________________________
consensus             ATAATTCAACTTCTACTCCAACACCACCTATGGTTAAAACTGTTTCGCTCTCGTCTTTAT
 
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rJMSF006K11+          AATTGGAGGATGTATATGACAGAAGAATCAGCACTTAGCTATGGAAATTGAAAGAATGCT
rJMSF019H24+          AATTGGAGGATGTATATGACAGAAGAATCAGCACTTAGCTATGGAAATTGAAAGAATGCT
                      ____________________________________________________________
consensus             AATTGGAGGATGTATATGACAGAAGAATCAGCACTTAGCTATGGAAATTGAAAGAATGCT
 
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rJMSF006K11+          ACAGTGTATAAGTATATTCTTTTGCTTCTTGAACTCAAT                     
rJMSF019H24+          ACAGTGTATAAGTATATTCTTTTGCTTCTTGAACTCAATTGCTTAGCCACTTCATCTGTT
                      ____________________________________________________________
consensus             ACAGTGTATAAGTATATTCTTTTGCTTCTTGAACTCAATTGCTTAGCCACTTCATCTGTT
 
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rJMSF019H24+          GAAGCTCTATGTATAAGTATTTTCCTGCACATTGTTAACCTCCCTCTCCCTCTCCCTCTC
                      ____________________________________________________________
consensus             GAAGCTCTATGTATAAGTATTTTCCTGCACATTGTTAACCTCCCTCTCCCTCTCCCTCTC
 
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rJMSF019H24+          CCTTACCCATCACAACATGCCCATTTGGAAAAGCTCTTGCTAATGGGATTATAGAGATTT
                      ____________________________________________________________
consensus             CCTTACCCATCACAACATGCCCATTTGGAAAAGCTCTTGCTAATGGGATTATAGAGATTT