| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF019D19 | Sequence | 470 | 007925 (5) | 744 | 009951 (3) | ref|XP_009757535.1| | 1e-78 | PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL1 isoform X2 [N | |||
| JMSF028O08 | Sequence | 601 | 007925 (5) | ref|XP_011076298.1| | 2e-16 | PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL1 isoform X1 [S | 738 | 009951 (3) | ref|XP_009757535.1| | 8e-82 | PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL1 isoform X2 [N |
| JMSF051B05 | Sequence | 727 | 007925 (5) | ref|XP_009757535.1| | 2e-90 | PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL1 isoform X2 [N | 746 | 009951 (3) | emb|CAN79933.1| | 3e-71 | hypothetical protein VITISV_008329 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF051B05+ TCGGACTTTGGGATTGCAAAATGCGTATCTTCAGCGAAAACTCATACTTCAACC
rJMSF028O08+ TGCAAAATGCATATCTTCAGCGAAAACTCATACTTCAACC
rJMSF019D19+ TCAGCGAAAACTCATACTTCAACC
____________________________________________________________
consensus TCGGACTTTGGGATTGCAAAATGCGTATCTTCAGCGAAAACTCATACTTCAACC
. : . : . : . : . : . :
rJMSF051B05+ TATGTTCTTGNCACCATAGGTTATATCGATCCAGAGTATGCCAGGACTTCCAGACTAACT
rJMSF028O08+ TATGTTCTTGGCACCATAGGTTATATCGATCCAGAGTATGCCAGGACTTCCAGACTAACT
rJMSF019D19+ TATGTTCTTGGCACCATAGGTTATATCGATCCAGAGTATGCCAGGACTTCCAGACTAACT
____________________________________________________________
consensus TATGTTCTTGGCACCATAGGTTATATCGATCCAGAGTATGCCAGGACTTCCAGACTAACT
. : . : . : . : . : . :
rJMSF051B05+ GAAAAATCAGATGTCTATAGCTTTGGGATTGTTCTCTTAGAGCTCTTGACAGGAAAGAAG
rJMSF028O08+ GAAAAATCAGATGTCTATAGCTTTGGGATTGTTCTCTTAGAGCTCTTGACAGGAAAGAAG
rJMSF019D19+ GAAAAATCAGATGTCTATAGCTTTGGGATTGTTCTCTTAGAGCTCTTGACAGGAAAGAAG
____________________________________________________________
consensus GAAAAATCAGATGTCTATAGCTTTGGGATTGTTCTCTTAGAGCTCTTGACAGGAAAGAAG
. : . : . : . : . : . :
rJMSF051B05+ CCAGTGGACAATGACTCGAACTTGCATCAGCTGATACTGTCTAAGGCAGATAACAACACC
rJMSF028O08+ CCAGTGGACAATGACTCGAACTTGCATCAGCTGATACTGTCTAAGGCAGATAACAACACC
rJMSF019D19+ CCAGTGGACAATGACTCGAACTTGCATCAGCTGATACTGTCTAAGGCAGATAACAACACC
____________________________________________________________
consensus CCAGTGGACAATGACTCGAACTTGCATCAGCTGATACTGTCTAAGGCAGATAACAACACC
. : . : . : . : . : . :
rJMSF051B05+ GTGATGGAGGCTGTGGACTCTGAGGTATCAGTTACATGCACGGATTTGAGCCATGTCAGT
rJMSF028O08+ GTGATGGAGGCTGTGGACTCTGAGGTATCAGTTACATGCACGGATTTGAGCCATGTCAGT
rJMSF019D19+ GTGATGGAGGCTGTGGACTCTGAGGTATCAGTTACATGCACGGATTTGAGCCATGTCAGT
____________________________________________________________
consensus GTGATGGAGGCTGTGGACTCTGAGGTATCAGTTACATGCACGGATTTGAGCCATGTCAGT
. : . : . : . : . : . :
rJMSF051B05+ AAAACCTTTCAACTTGCTCTTCTCTGCACGAAACGGCTGCCATCAGAGAGGCCAACAATG
rJMSF028O08+ AAAACCTTTCAACTTGCTCTTCTCTGCACGAAACGGCTGCCATCAGAGAGGCCAACAATG
rJMSF019D19+ AAAACCTTTCAACTTGCTCTTCTCTGCACGAAACGGCTGCCATCAGAGAGGCCAACAATG
____________________________________________________________
consensus AAAACCTTTCAACTTGCTCTTCTCTGCACGAAACGGCTGCCATCAGAGAGGCCAACAATG
. : . : . : . : . : . :
rJMSF051B05+ CATGAAGTTGTTAGGGTCCTCACTTCTCTGCTTCCACCGCCTCCACTGAAGCCTTGTTTG
rJMSF028O08+ CATGAAGTTGTTAGGGTCCTCACTTCTCTGCTTCCACCGCCTCCACTGAAGCCTTGTTTG
rJMSF019D19+ CATGAAGTTGTTAGGGTCCTCACTTCTCTGCTTCCACCGCCTCCACTGAAGCCTTGTTTG
____________________________________________________________
consensus CATGAAGTTGTTAGGGTCCTCACTTCTCTGCTTCCACCGCCTCCACTGAAGCCTTGTTTG
. : . : . : . : . : . :
rJMSF051B05+ CCTCCGTCAAAATCCATAAACTATGCACAGTTTTTGGTAGGGAA-GGACAGACTGAAAAC
rJMSF028O08+ CCTCCGTCAAAATCCATAAACTATGCACAGTTTTTGGTAGGGAAGGGACAGACTGAAAAC
rJMSF019D19+ CCTCCGTCAAAATCCATAAACTATGCACAGTTTTTGGTAGGGAAGGGACAGACTGAAAAC
____________________________________________________________
consensus CCTCCGTCAAAATCCATAAACTATGCACAGTTTTTGGTAGGGAAGGGACAGACTGAAAAC
. : . : . : . : . : . :
rJMSF051B05+ CAGCAGGATGGCAATTCCTCTGATGCACAATGGCTGGTGAGATTCCGGGAAGCCATATCC
rJMSF028O08+ CAGCAGGATGGCAATTCCTCTGATGCACAATGGCTGGTGAGATTCCGGGAAGCCATATCC
rJMSF019D19+ CAGCAGGATGGCAATTCCTCTGATGCACAATGGCTGGTGAGATTCCGGGAAGCCATATCC
____________________________________________________________
consensus CAGCAGGATGGCAATTCCTCTGATGCACAATGGCTGGTGAGATTCCGGGAAGCCATATCC
. : . : . : . : . : . :
rJMSF051B05+ AAAAACACACTTTGAATCTGAAGGTGTAAGGTTTGTTTAGCCAAAGTTTTGTTGATGTTG
rJMSF028O08+ AAAAACACACTTTGAATCTGAAGGTGTAAGGTTTGTTTAGCCAAAGTTTTGTTGATGTTG
rJMSF019D19+ AAAAACACACTTTGAATCTGAAGGTGTAAGGTTTGTTTAGCCAAAGTTTTGTTGATGTTG
____________________________________________________________
consensus AAAAACACACTTTGAATCTGAAGGTGTAAGGTTTGTTTAGCCAAAGTTTTGTTGATGTTG
. : . : . : . : . : . :
rJMSF051B05+ GCTGTTTTTGATACATGGTTTAGGACTGATCAAAGAAAGATCTAAATGCCTAGAATGTCT
rJMSF028O08+ GCTGTTTTTGATACATGGTTTAGGACTGATCAAAGAAAGATCTAAATGCCTAGAATGTCT
rJMSF019D19+ GCTGTTTTTGATACATGGTTTAGGACTGATCAAAGAAAGATCTAAATGCCTAGAATGTCT
____________________________________________________________
consensus GCTGTTTTTGATACATGGTTTAGGACTGATCAAAGAAAGATCTAAATGCCTAGAATGTCT
. : . : . : . : . : . :
rJMSF051B05+ GATCTGATCATATATTTTGTAGTAATAGATGTTATCATCTGGAAATTGTACTGTCATGCA
rJMSF028O08+ GATCTGATCATATATTTTGTAGTAATAGATGTTATCATCTGGAAATTGTACTGTCATGCA
rJMSF019D19+ GATCTGATCATATATTTTGTAGTAATAGATGTTATCATCTGGAAATTGTACTGTCATGCA
____________________________________________________________
consensus GATCTGATCATATATTTTGTAGTAATAGATGTTATCATCTGGAAATTGTACTGTCATGCA
. : . : . : . : . : . :
rJMSF051B05+ TCTTCTTTTCCTCTTTCCCTGTATAGTACCAAG
rJMSF028O08+ TCTTCTTTTCCTCTTTCCCTGTATAGTACCAAG
rJMSF019D19+ TCTTCTTTTCCTCTTTCCCTGTATAGTACCAAGTAATGCAACTCTGTCTATGCCTAATCA
____________________________________________________________
consensus TCTTCTTTTCCTCTTTCCCTGTATAGTACCAAGTAATGCAACTCTGTCTATGCCTAATCA