Contig 009949:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF048E16+           GTTCGCAATGCATCACTTCTGTCAGACTGGCCTTCNTGATATGCAGAAGGTGCTAGTTC
                      ____________________________________________________________
consensus              GTTCGCAATGCATCACTTCTGTCAGACTGGCCTTCNTGATATGCAGAAGGTGCTAGTTC
 
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rJMSF048E16+          CNTGGTGAGTTAAGGTTATTGTCATGCAATCTTCTAACAAGTGAAGCTCTTGAGGAACTC
                      ____________________________________________________________
consensus             CNTGGTGAGTTAAGGTTATTGTCATGCAATCTTCTAACAAGTGAAGCTCTTGAGGAACTC
 
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rJMSF048E16+          TCATCTTTTGGTAAATTGGAAGTGCTTGACATGTCTGGGTGCAGAAGTATTGCAAACCCC
rJMSF018K01+              CTTTTGGTAAATTGGAAGTGCTTGACATGTCTGGGTGCAGAAGTATTGCAAACCCC
                      ____________________________________________________________
consensus             TCATCTTTTGGTAAATTGGAAGTGCTTGACATGTCTGGGTGCAGAAGTATTGCAAACCCC
 
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rJMSF048E16+          TGTCTTAGCTACATATCAAGCCTTAGTACACTCACAAATTTAACTTTACCAGGTGCTGAT
rJMSF018K01+          TGTCTTAGCTACATATCAAGCCTTAGTACACTCACAAATTTAACTTTAGCAGGTGCTGAT
                      ____________________________________________________________
consensus             TGTCTTAGCTACATATCAAGCCTTAGTACACTCACAAATTTAACTTTAGCAGGTGCTGAT
 
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rJMSF048E16+          ATTACTGACGATGGTCTGGCTATTTTTGGTAGAGGAAGCTCATCGATGCTTACACGTTTA
rJMSF018K01+          ATTACTGACGATGGTCTGGCTATTTTTGGTAGAGGAAGCTCATCGATGCTTACACGTTTA
                      ____________________________________________________________
consensus             ATTACTGACGATGGTCTGGCTATTTTTGGTAGAGGAAGCTCATCGATGCTTACACGTTTA
 
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rJMSF048E16+          TGCATTAAAGGTTGTAAGAGAATTTCTGAAAAGGGAATTCATAAGTTATTTCATGGCGAA
rJMSF018K01+          TGCATTAAAGGTTGTAAGAGAATTTCTGAAAAGGGAATTCATAAGTTATTTCATGGCGAA
                      ____________________________________________________________
consensus             TGCATTAAAGGTTGTAAGAGAATTTCTGAAAAGGGAATTCATAAGTTATTTCATGGCGAA
 
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rJMSF048E16+          GGGAAAATTGGCAATAAATTGTTGTTTCTGGATATTAGCTACATGCCTGGAATATCTGAT
rJMSF018K01+          GGGAAAATTGGCAATAAATTGTTGTTTCTGGATATTAGCTACATGCCTGGAATATCTGAT
                      ____________________________________________________________
consensus             GGGAAAATTGGCAATAAATTGTTGTTTCTGGATATTAGCTACATGCCTGGAATATCTGAT
 
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rJMSF048E16+          GCTGCAATTGCAACAATTACTTCTGCTGCTAAAGCATTAACCGATCTATGTATGAGGTAT
rJMSF018K01+          GCTGCAATTGCAACAATTACTTCTGCTGCTAAAGCATTAACCGATCTATGTATGAGGTAT
                      ____________________________________________________________
consensus             GCTGCAATTGCAACAATTACTTCTGCTGCTAAAGCATTAACCGATCTATGTATGAGGTAT
 
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rJMSF048E16+          TGCTTTTTTGTGACTAATGCTGCAGTGAAAATGTTAGCGTCCAGGGGAACATTGCGTGAT
rJMSF018K01+          TGCTTTTTTGTGACTAATGCTGCAGTGAAAATGTTAGCGTCCAGGGGAACATTGCGTGAT
                      ____________________________________________________________
consensus             TGCTTTTTTGTGACTAATGCTGCAGTGAAAATGTTAGCGTCCAGGGGAACATTGCGTGAT
 
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rJMSF048E16+          GGAAGTGCCCTACTTCGAAGACTTGATCTTTGTCACTGCTCAGGATTGTCAAATGATTTA
rJMSF018K01+          GGAAGTGCCCTACTTCGAAGACTTGATCTTTGTCACTGCTCAGGATTGTCAAATGATTTA
                      ____________________________________________________________
consensus             GGAAGTGCCCTACTTCGAAGACTTGATCTTTGTCACTGCTCAGGATTGTCAAATGATTTA
 
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rJMSF048E16+          ATACACATTCTTGATAAGTCTTCATTCCCTGGTTTGCACTGGATTGGCCTTGGTTCTACT
rJMSF018K01+          ATACACATTCTTGATAAGTCTTCATTCCCTGGTTTGCACTGGATTGGCCTTGGTTCTACT
                      ____________________________________________________________
consensus             ATACACATTCTTGATAAGTCTTCATTCCCTGGTTTGCACTGGATTGGCCTTGGTTCTACT
 
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rJMSF048E16+          GCCTTGGAGACTAGAAAAGACGAGTTTGATGTGATGCTCAATAAGCGGCCATGGCTTACA
rJMSF018K01+          GCCTTGAAGACTAGAAAAGACGAGTTTGATGTGATGCTCAATAAGCGGCCATGGCTTACA
                      ____________________________________________________________
consensus             GCCTTGGAGACTAGAAAAGACGAGTTTGATGTGATGCTCAATAAGCGGCCATGGCTTACA
 
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rJMSF048E16+          GTGTGTTTTGATGACTGTGAATTGGGATGCCATGATGGATGGATGTATTAGGTTTGATGT
rJMSF018K01+          GTGTGTTTTGATGACTGTGAATTGGGATGCCATGATGGATGGATGTATTAGGTTTGATGT
                      ____________________________________________________________
consensus             GTGTGTTTTGATGACTGTGAATTGGGATGCCATGATGGATGGATGTATTAGGTTTGATGT
 
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rJMSF048E16+          CTCTATGGAATCAGACAGTTTTTGCCAAAACCTT                          
rJMSF018K01+          CTCTATGGAATCAGACAGTTTTTGCCAAAACCTTTGTATTGTTGGCTGTAAAAGGGCCTA
                      ____________________________________________________________
consensus             CTCTATGGAATCAGACAGTTTTTGCCAAAACCTTTGTATTGTTGGCTGTAAAAGGGCCTA