| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001K21 | Sequence | 399 | 009945 (9) | 699 | 009945 (9) | ref|XP_006361162.1| | 8e-103 | PREDICTED: putative casein kinase II subunit beta-4-like isoform X1 [Solanum tu | |||
| JMSF006F24 | Sequence | 387 | 009945 (9) | ||||||||
| JMSF015J06 | Sequence | 513 | 009945 (9) | ref|XP_004241980.1| | 2e-04 | PREDICTED: casein kinase II subunit beta-3 isoform X1 [Solanum lycopersicum] | 748 | 009945 (9) | ref|XP_006361162.1| | 1e-111 | PREDICTED: putative casein kinase II subunit beta-4-like isoform X1 [Solanum tu |
| JMSF017P02 | Sequence | 394 | 019968 | ref|XP_009594329.1| | 1e-21 | PREDICTED: casein kinase II subunit beta-3 isoform X3 [Nicotiana tomentosiformi | 719 | 009945 (9) | ref|XP_011070287.1| | 1e-82 | PREDICTED: putative casein kinase II subunit beta-4 isoform X1 [Sesamum indicum |
| JMSF026N07 | Sequence | 700 | 009945 (9) | ref|XP_004241980.1| | 6e-125 | PREDICTED: casein kinase II subunit beta-3 isoform X1 [Solanum lycopersicum] | 772 | 024588 | ref|XP_009607841.1| | 2e-100 | PREDICTED: BTB/POZ domain-containing protein At3g05675 [Nicotiana tomentosiform |
| JMSF034G08 | Sequence | 707 | 009945 (9) | ref|XP_010322880.1| | 4e-36 | PREDICTED: casein kinase II subunit beta-3 isoform X3 [Solanum lycopersicum] | 725 | 009945 (9) | ref|XP_006361162.1| | 3e-98 | PREDICTED: putative casein kinase II subunit beta-4-like isoform X1 [Solanum tu |
This contig is upended
. : . : . : . : . : . :
JMSF015J06- AGTCCTCAGTGGGCAGCCATGCCGTGACCCAGTCCCAGT
JMSF006F24- GACCCAGTCCCAGT
JMSF034G08- GATGTTGCAGTCCTCAGTGGGCAGCCATGCCGTGACCCAGTCCCAGT
____________________________________________________________
consensus GATGTTGCAGTCCTCAGTGGGCAGCCATGCCGTGACCCAGTCCCAGT
. : . : . : . : . : . :
JMSF015J06- CCCATCCCAATTAGAAAATCTTCAATCACAAAAGCGAACAACACAGTAAAGGATGGGATA
JMFF001K21- TAAAGGATGGGATA
JMSF006F24- CCCATCCCAATTAGAAAATCTTCAATCACAAAAGCGAACAACACAGTAAAGGATGGGATA
JMSF034G08- CCCATCCCAATTAGAAAATCTTCAATCACAAAAGCGAACAACACAGTAAAGGATGGGATA
____________________________________________________________
consensus CCCATCCCAATTAGAAAATCTTCAATCACAAAAGCGAACAACACAGTAAAGGATGGGATA
. : . : . : . : . : . :
JMSF015J06- GCCCTCATCCTCCGTTCCGACGCCCCCNAAAATCAAATCCCTAATTTAACCCATCTTCCC
JMFF001K21- GCCCTCATCCTCCGTTCCGACGCCCCCAAAAATCAAATCCCTAATTTAACCCATCTTCCC
JMSF006F24- GCCCTCATCCTCCGTTCCGACGCCCCCAAAAATCAAATCCCTAATTTAACCCATCTTCCC
JMSF034G08- GCCCTCATCCTCCGTTCCGACGCCCCCAAAAATCAAATCCCTAATTTAACCCATCTTCCC
____________________________________________________________
consensus GCCCTCATCCTCCGTTCCGACGCCCCCAAAAATCAAATCCCTAATTTAACCCATCTTCCC
. : . : . : . : . : . :
JMSF015J06- GAACAAAACCCTAAAATTTGCCCCTCTTTTCTCCTTGATTTCTGATTTTTCGTTGTGCCG
JMFF001K21- GAACAAAACCCTAAAATTTGCCCCTCTTTTCTCCTTGATTTCTGATTTTTCGTTGTGCCG
JMSF006F24- GAACAAAACCCTAAAATTTGCCCCTCTTTTCTCCTTGATTTCTGATTTTTCGTTGTGCCG
JMSF034G08- GAACAAAACCCTAAAATTTGCCCCTCTTTTCTCCTTGATTTCTGATTTTTCGTTGTGCCG
____________________________________________________________
consensus GAACAAAACCCTAAAATTTGCCCCTCTTTTCTCCTTGATTTCTGATTTTTCGTTGTGCCG
. : . : . : . : . : . :
JMSF015J06- AGACAGAGGGGAGAGCAACATGTATAGGGATAAAAGAGGTGGCGGTGGCGGTGGCGGTGG
JMFF001K21- AGACAGAGGGGAGAGCAACATGTATAGGGATAAAAGAGGTGGCGGTGGCGGTGGCGGTGG
JMSF006F24- AGACAGAGGGGAGAGCAACATGTATAGGGATAAAAGAGGTGGCGGTGGCGGTGGCGGTGG
JMSF034G08- AGACAGAGGGGAGAGCAACATGTATAGGGATAAAAGAGGTGGCGGTGGCGGTGGCGGTGG
____________________________________________________________
consensus AGACAGAGGGGAGAGCAACATGTATAGGGATAAAAGAGGTGGCGGTGGCGGTGGCGGTGG
. : . : . : . : . : . :
JMSF015J06- CGGTGGCGGATCTAAAGCGGCGGCTGANATGAGCCACGTGACGGACAGGANGAAGCTGAA
JMFF001K21- CGGTGGCGGATCTAAAGCGGCGGCTGAGATGAGCCACGTGACGGACAGGAAGAAGCTGAA
JMSF006F24- CGGTGGCGGATCTAAAGCGGCGGCTGAGATGAGCCACGTGACGGACAGGAAGAAGCTGAA
JMSF034G08- CGGTGGCGGATCTAAAGCGGCGGCTGAGATGAGCCACGTGACGGACAGGAAGAAGCTGAA
____________________________________________________________
consensus CGGTGGCGGATCTAAAGCGGCGGCTGAGATGAGCCACGTGACGGACAGGAAGAAGCTGAA
. : . : . : . : . : . :
JMSF015J06- TGTGGCTTTGGACAAGCACTTGGACCGTTCGTCTCCCTCCACTTCCACCACCACTACCAG
JMFF001K21- TGTGGCTTTGGACAAGCACTTGGACCGTTCGTCTCCCTCCACTTCCACCACCACTACCAG
JMSF006F24- TGTGGCTTTGGACAAGCACTTGGACCGTTCGTCTCCCTCCACTTCCACCACCACTACCAG
JMSF034G08- TGTGGCTTTGGACAAGCACTTGGACCGTTCGTCTCCCTCCACTTCCACCACCACTACCAG
JMSF026N07+ TACCAG
____________________________________________________________
consensus TGTGGCTTTGGACAAGCACTTGGACCGTTCGTCTCCCTCCACTTCCACCACCACTACCAG
. : . : . : . : . : . :
JMSF015J06- AGGGCTCGCCGCCAAAGATCCTCGTTTGTCTATGTATAAATCCAAGGAGAATCACAAAGC
JMFF001K21- AGGGCTCGCCGCCAAAGATCCTCGTNTGTCTATGTATAAATCCGAGGAGAATCACAAAGC
JMSF006F24- AGGGCTCGCCGC
JMSF034G08- AGGGCTCGCCGCCAAAGATCCTCGTTTGTCTATGTATAAATCCAAGGAGAATCACAAAGC
JMSF026N07+ AGGGCTCGCCGCCAAAGATCCTCGTTTGTCTATGTATAAATCCAAGGAGAATCACAAAGC
____________________________________________________________
consensus AGGGCTCGCCGCCAAAGATCCTCGTTTGTCTATGTATAAATCCAAGGAGAATCACAAAGC
. : . : . : . : . : . :
JMSF015J06- ATCTCGCTCTTCCGCACCGGATGAAAACAAAAACTCCGATGTGGAATCTGA
JMFF001K21- ATCTCGCTCTTCCGCACCGGA
JMSF034G08- ATCTCGCTCTTCCGCACCGGATGAAAACAAAAACTCCGATGTGGAATCTGAAACAGACAG
JMSF026N07+ ATCTCGCTCTTCCGCACCGGATGAAAACAAAAACTCCGATGTGGAATCTGAAACAGACAG
____________________________________________________________
consensus ATCTCGCTCTTCCGCACCGGATGAAAACAAAAACTCCGATGTGGAATCTGAAACAGACAG
. : . : . : . : . : . :
JMSF034G08- TGAGGAGTCAGATATTAGTGGTTCTGATGGTGAAGATACATCATGGATTTCATGGTATTG
JMSF026N07+ TGAGGAGTCAGATATTAGTGGTTCTGATGGTGAAGATACATCATGGATTTCATGGTATTG
____________________________________________________________
consensus TGAGGAGTCAGATATTAGTGGTTCTGATGGTGAAGATACATCATGGATTTCATGGTATTG
. : . : . : . : . : . :
JMSF034G08- CAATCTACGTGGGAATGAGTTCTTCTGTGAAGTTGACGATGACTACATCCAAGATGACTT
JMSF026N07+ CAATCTACGTGGGAATGAGTTCTTCTGTGAAGTTGACGATGACTACATCCAAGATGACTT
rJMSF015J06+ GAAGTTGACGATGACTACATCCAAGATGACTT
____________________________________________________________
consensus CAATCTACGTGGGAATGAGTTCTTCTGTGAAGTTGACGATGACTACATCCAAGATGACTT
. : . : . : . : . : . :
JMSF034G08- TAACCTCTGTGGTCTTAGCAGCCTAGTTCCATATTATGATTATGCACTCGATTTGATTTT
JMSF026N07+ TAACCTCTGTGGTCTTAGCAGCCTAGTTCCATATTATGATTATGCACTCGATTTGATTTT
rJMFF001K21+ TCTTAGCAGCCTAGTTCCATATTATGATTATGCACTCGATTTGATTTT
rJMSF015J06+ TAACCTCNGTGGTCTTAGCAGCCTAGTTCCATATTATGATTATGCACTCGATTTGATTTT
rJMSF034G08+ CCATATTATGATTATGCACTCGATTTGATTTN
____________________________________________________________
consensus TAACCTCTGTGGTCTTAGCAGCCTAGTTCCATATTATGATTATGCACTCGATTTGATTTT
. : . : . : . : . : . :
JMSF026N07+ GGATGTTGAATCTTCTCACGGTGATATGTTTACAGAAGAGCAGAATGAAATCGTTGAGTC
rJMFF001K21+ GGATGTTGAATCTTCTCACGGTGATATGTTTACAGAAGAGCAGAATGAAATCGTTGAGTC
rJMSF015J06+ GGATGTTGAATCNTCTCACGGTGATATGTTTACAGAAGAGCAGAATGAAATCGTTGAGTC
rJMSF034G08+ GGATGTTGAATCTTCTCACGGTGATATGTTTACAGAAGAGCAGAATGAAATCGTTGAGTC
rJMSF017P02+ GTTGAATCTTCTCATGGTGATATG-TTACAGAAGAACAGAATGAACTAGTTGAATC
____________________________________________________________
consensus GGATGTTGAATCTTCTCACGGTGATATGTTTACAGAAGAGCAGAATGAAATCGTTGAGTC
. : . : . : . : . : . :
JMSF026N07+ AGCAGCTGAAATGCTTTATGGTCTAATACATGTCCGATACATATTGACAACGAAAGGACT
rJMFF001K21+ AGCAGCTGAAATGCTTTATGGTCTAATACATGTCCGATACATATTGACAACGAAAGGACT
rJMSF015J06+ AGCAGCTGAAATGCTTTATGGTCTAATACATGTCCGATACATATTGACAACGAAAGGACT
rJMSF034G08+ AGCAGCNGAAATGCTTTATGGTCTAATACATGTCCGATACATATTGACAACGAAAGGACT
rJMSF017P02+ AGCAGCTGAGATGCTTTATGGCCTAATACATAACCGCTACATATTGACAACCAAAGGACT
____________________________________________________________
consensus AGCAGCTGAAATGCTTTATGGTCTAATACATGTCCGATACATATTGACAACGAAAGGACT
. : . : . : . : . : . :
JMSF026N07+ TGCTGCTATGCTAGAGAAGTACAAGAATGCTGAATTTGGAAGATGCCCAAGAGTTTACTG
rJMFF001K21+ TGCTGCTATGCTAGAGAAGTACAAGAATGCTGAATTTGGAAGATGCCCAAGAGTTTACTG
rJMSF015J06+ TGCTGCTATGCTAGAGAAGTACAAGAATGCTGAATTTGGAAGATGCCCAAGAGTTTACTG
rJMSF034G08+ TGCTGCTATGCTAGAGAAGTACAAGAATGCTGAATTTGGAAGATGCCCAAGAGTTTACTG
rJMSF017P02+ TGCTGCAATGCTAGAGAAATACAAAAATGCTGAATTTGGTAGATGCCCAAGAGTTTACTG
____________________________________________________________
consensus TGCTGCTATGCTAGAGAAGTACAAGAATGCTGAATTTGGAAGATGCCCAAGAGTTTACTG
. : . : . : . : . : . :
JMSF026N07+ CTGTGGTCAACCATGCCTCCCTGTTGGTCAGTCAGATATTCCTCGACAGAGTACGGTGAA
rJMFF001K21+ CTGTGGTCAACCATGCCTCCCTGTTGGTCAGTCAGATATTCCTCGACAGAGTACGGTGAA
rJMSF015J06+ CTGTGGTCAACCATGCCTCCCTGTTGGTCAGTCAGATATTCCTCGACAGAGTACGGTGAA
rJMSF034G08+ CTGTGGTCAACCATGCCTCCCTGTTGGTCAGTCAGATATTCCTCGACAGAGTACGGTGAA
rJMSF017P02+ CTGTGGTCAACCATGCCTCCCTGTTGGTCAGTCAGACATACCTCGACAGAGCACAGTGAA
____________________________________________________________
consensus CTGTGGTCAACCATGCCTCCCTGTTGGTCAGTCAGATATTCCTCGACAGAGTACGGTGAA
. : . : . : . : . : . :
JMSF026N07+ AATTTACTGCCCGAGGTGTGAAGAGTTATACACTCCTCGATCTCGCTATCAAGACAGTAT
rJMFF001K21+ AATTTACTGCCCGAGGTGTGAAGAGTTATACACTCCTCGATCTCGCTATCAAGACAGTAT
rJMSF015J06+ AATTTACTGCCCGAGGTGTGAAGAGTTATACACTCCTCGATCTCGCTATCAAGACAGTAT
rJMSF034G08+ AATTTACTGCCCGAGGTGTGAAGAGTTATACACTCCTCGATCTCGCTATCAAGACAGTAT
rJMSF017P02+ AATATTTTGCCCTAGGTGTGAAGAAATATACACTCCTAGATCCAGATATCAAGAGAGCAT
____________________________________________________________
consensus AATTTACTGCCCGAGGTGTGAAGAGTTATACACTCCTCGATCTCGCTATCAAGACAGTAT
. : . : . : . : . : . :
JMSF026N07+ TGATGGCGCTTATTTTGGAACGACATTTCCACACCTTTTCCTACTGACATATGGACATCT
rJMFF001K21+ TGATGGCGCTTATTTTGGAACGACATTTCCACACCTTTTCCTACTGACATATGGACATCT
rJMSF015J06+ TGATGGCGCTTATTTTGGAACGACATTTCCACACCTTTTCCTACTGACATATGGACATNT
rJMSF034G08+ TGATGGCGCTTATTTTGGAACGACATTTCCACACCTTTTCCTACTGACATATGGACATNT
rJMSF017P02+ CGACGGAGCCTATTTTGGGACGACATTTCCGCACCTTTTCCTGTTGACTTACAAACACCT
____________________________________________________________
consensus TGATGGCGCTTATTTTGGAACGACATTTCCACACCTTTTCCTACTGACATATGGACATCT
. : . : . : . : . : . :
JMSF026N07+ GAAGCCACAGAAGTCTTCTCAGAGCTATGTT
rJMFF001K21+ GAAGCCACAGAAGTCTTCTCAGAGCTATGTTCCTCGAGTATTTGGTTTCAAGGTCCACAA
rJMSF015J06+ GAAGCCACAGAAGTCTTCTCAGAGCTATGTTCCTCGAGTANTTGGTTTCAAGGTCCACAA
rJMSF034G08+ GAAGCCACAGAAGTCTTCTCAGAGCTATGTTCCTCGAGTATTTGGTTTCAAGGTCCACAA
rJMSF017P02+ CAAGCCACAGAAGTCTTCACAGAGCTACATCCCTCGGGTATTTGGTTTCAAAGTCCACAA
____________________________________________________________
consensus GAAGCCACAGAAGTCTTCTCAGAGCTATGTTCCTCGAGTATTTGGTTTCAAGGTCCACAA
. : . : . : . : . : . :
rJMFF001K21+ GCCATGAACCTG
rJMSF015J06+ GCCATGAACCTG
rJMSF034G08+ GCCATGAACCTG
rJMSF017P02+ GCCATGATCCTGGAGTTATTACTCGGGATTTGTATCATTATCAATGCTTCAGGAGGGGGG
____________________________________________________________
consensus GCCATGAACCTGGAGTTATTACTCGGGATTTGTATCATTATCAATGCTTCAGGAGGGGGG
. : . : . : . : . : . :
rJMSF017P02+ ATAGACACTCACCATATATTCTATACCTTACATATAAAGGCAAGATACAAGAAGTACAAA
____________________________________________________________
consensus ATAGACACTCACCATATATTCTATACCTTACATATAAAGGCAAGATACAAGAAGTACAAA
. : . : . : . : . : . :
rJMSF017P02+ GATGCTCAAGTCTATGTCAACTTTCTTGCTTAATGTAGTTACCTTCAATCAAAAAGTGTT
____________________________________________________________
consensus GATGCTCAAGTCTATGTCAACTTTCTTGCTTAATGTAGTTACCTTCAATCAAAAAGTGTT
. : . : . : . : . : . :
rJMSF017P02+ TTTTCCCACTGTGAATTGCAGTTTTCCCTATTCCTTGTTGTGTTTCTCATTGGTATTCAG
____________________________________________________________
consensus TTTTCCCACTGTGAATTGCAGTTTTCCCTATTCCTTGTTGTGTTTCTCATTGGTATTCAG
. : . : . : . : . : . :
rJMSF017P02+ TCCACTAAAGTGCATCAATCATTTCGAGAATGACTTGTAATCCTGAATTTCTCATGAAAA
____________________________________________________________
consensus TCCACTAAAGTGCATCAATCATTTCGAGAATGACTTGTAATCCTGAATTTCTCATGAAAA