Contig 009944:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009K19Sequence288002117 (2)ref|XP_009766329.1|103PREDICTED: uncharacterized protein LOC104217722 [Nicotiana sylvestris]741009944 (2)ref|XP_009622453.1|324PREDICTED: uncharacterized protein LOC104113849 [Nicotiana tomentosiformis]
JMSF017N14Sequence216002117 (2)ref|XP_009622453.1|59.3PREDICTED: uncharacterized protein LOC104113849 [Nicotiana tomentosiformis]711009944 (2)ref|XP_009622453.1|227PREDICTED: uncharacterized protein LOC104113849 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF009K19+ GTCCTCAATAACCTTGCACAGGTTGGAATTGCACAAGGTGTTAACGACACGACAATCT
                      ____________________________________________________________
consensus GTCCTCAATAACCTTGCACAGGTTGGAATTGCACAAGGTGTTAACGACACGACAATCT
 
. : . : . : . : . : . :
rJMSF009K19+ TGTTGTCTCTCTTCAGCTTCTGCAATTTCGTGGGTCGTCTTGGTGGCGGGATTGTTTCTG
                      ____________________________________________________________
consensus TGTTGTCTCTCTTCAGCTTCTGCAATTTCGTGGGTCGTCTTGGTGGCGGGATTGTTTCTG
 
. : . : . : . : . : . :
rJMSF009K19+ AACATTTTGTCAGGTTAAAAGCTCTTCCAAGAACGATTTGGATGACGTTCACGCAAGTAG
rJMSF017N14+ GTCAGGTTAAAAGCTCTTCCAAGAACGA-TTGGATGACGTTCACGCAAGTAG
                      ____________________________________________________________
consensus AACATTTTGTCAGGTTAAAAGCTCTTCCAAGAACGATTTGGATGACGTTCACGCAAGTAG
 
. : . : . : . : . : . :
rJMSF009K19+ TGATGATAATTACATACTTCCTATTTGCTTCTGCTCTTAACGGGACCCTCTATGTGGCCA
rJMSF017N14+ TGATGATAATTACATACTTCNTATNTGCNTCTGCTCTTAACGGGACCCTCTATGTGGCCA
                      ____________________________________________________________
consensus TGATGATAATTACATACTTCCTATTTGCTTCTGCTCTTAACGGGACCCTCTATGTGGCCA
 
. : . : . : . : . : . :
rJMSF009K19+ CAGCGCTACTCGGGATCTGCTATGGCGTTCAGTTCTCCATACTGATCCCTACTACCTCCG
rJMSF017N14+ CAGCGCTACTCGGGATCTGCTANGGCGTTCAGTTCTCCATACTGATCCCTACTACCTCCG
                      ____________________________________________________________
consensus CAGCGCTACTCGGGATCTGCTATGGCGTTCAGTTCTCCATACTGATCCCTACTACCTCCG
 
. : . : . : . : . : . :
rJMSF009K19+ AGCTTTTTGGCTTGAAGCACTTCGGGCTAATTCTCAGCTTCATGGGAATAGGGAACCCTC
rJMSF017N14+ AGCTTTTTGGCTTGAAGCACTTCGGGCTAATTCTCAGCTTCATGGGAATAGGGAACCCTC
                      ____________________________________________________________
consensus AGCTTTTTGGCTTGAAGCACTTCGGGCTAATTCTCAGCTTCATGGGAATAGGGAACCCTC
 
. : . : . : . : . : . :
rJMSF009K19+ TCGGTGCCTATCTCTTCTCGGGTCTTCTTGCTGGATATTTATATGATATCGAGGCTGCAA
rJMSF017N14+ TCGGTGCCTATCTCTTCTCGGGTCTTCTTGCTGGATATTTATATGATATCGAGGCTGCAA
                      ____________________________________________________________
consensus TCGGTGCCTATCTCTTCTCGGGTCTTCTTGCTGGATATTTATATGATATCGAGGCTGCAA
 
. : . : . : . : . : . :
rJMSF009K19+ AGCAGCATAGCGATACCTGCATCGGTCCTAACTGCTTTCGGGTAACATTCCTAGTTCTCG
rJMSF017N14+ AGCAGCATAGCGATACCTGCATCGGTCCTAACTGCTTTCGGGTAACATTCNTAGTTCTCG
                      ____________________________________________________________
consensus AGCAGCATAGCGATACCTGCATCGGTCCTAACTGCTTTCGGGTAACATTCCTAGTTCTCG
 
. : . : . : . : . : . :
rJMSF009K19+ CTGGACTTTGTTCTGCTGGCGCCTTGCTTAGCGTAGTTCTAACTGTGAGATTAAAGCCGG
rJMSF017N14+ CTGGACTTTGTTCTGCTGGCGCCTTGCTTAGCGTAGTTCTAACTGTGAGATTAAAGCCGG
                      ____________________________________________________________
consensus CTGGACTTTGTTCTGCTGGCGCCTTGCTTAGCGTAGTTCTAACTGTGAGATTAAAGCCGG
 
. : . : . : . : . : . :
rJMSF009K19+ TTTACCAGATGCTTTATGCCGGGGGCTCTTTCCGCCTGCCCCAAAGCTCAAACCACTAAC
rJMSF017N14+ TTTACCAGATGCTTTATGCCGGGGGCTCTTTCCGCCTGCCCCAAAGCTCAAACCACTAAC
                      ____________________________________________________________
consensus TTTACCAGATGCTTTATGCCGGGGGCTCTTTCCGCCTGCCCCAAAGCTCAAACCACTAAC
 
. : . : . : . : . : . :
rJMSF009K19+ ATTACTGTAACAACTACCACTTCTGGGATCTTTTGCTTTTTGTTTCTTAGATCCCATTGC
rJMSF017N14+ ATTACTGTAACAACTACCACTTCTGGGATCTTTTGCTTTTTGTTTCTTAGATCCCATTGC
                      ____________________________________________________________
consensus ATTACTGTAACAACTACCACTTCTGGGATCTTTTGCTTTTTGTTTCTTAGATCCCATTGC
 
. : . : . : . : . : . :
rJMSF009K19+ TCCCTCTTTTAGTCTCTATGGAGTAAAAAGTATGTTGTTTTGACAGTTTGAGCATCAAGA
rJMSF017N14+ TCCCTCTTTTAGTCTCTATGGAGTAAAAAGTATGTTGTTTTGACAGTTTGAGCATCAAGA
                      ____________________________________________________________
consensus TCCCTCTTTTAGTCTCTATGGAGTAAAAAGTATGTTGTTTTGACAGTTTGAGCATCAAGA
 
. : . : . : . : . : . :
rJMSF009K19+ ACTTAATATATGTAGCTACTAGG
rJMSF017N14+ ACTTAATATATGTAGCTATTAGGGCACAGGATTTTCTACTTCTGCCCTTACTGATGTATC
                      ____________________________________________________________
consensus ACTTAATATATGTAGCTATTAGGGCACAGGATTTTCTACTTCTGCCCTTACTGATGTATC
 
. : . : . : . : . : . :
rJMSF017N14+ TGCTTAAAACCACTGGGCTTTTAGCGGCTTTATTGTTATTATGATTATTAGTATTAGTAT
                      ____________________________________________________________
consensus TGCTTAAAACCACTGGGCTTTTAGCGGCTTTATTGTTATTATGATTATTAGTATTAGTAT