| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008O02 | Sequence | 553 | 009942 (6) | gb|EYU29627.1| | 6e-74 | hypothetical protein MIMGU_mgv1a015787mg [Erythranthe guttata] | 614 | 009942 (6) | gb|EYU29627.1| | 1e-73 | hypothetical protein MIMGU_mgv1a015787mg [Erythranthe guttata] |
| JMFF013K14 | Sequence | 613 | 009942 (6) | gb|EYU29627.1| | 2e-73 | hypothetical protein MIMGU_mgv1a015787mg [Erythranthe guttata] | |||||
| JMFN039E03 | Sequence | 596 | 009942 (6) | gb|EYU29627.1| | 4e-73 | hypothetical protein MIMGU_mgv1a015787mg [Erythranthe guttata] | |||||
| JMSF017E03 | Sequence | 242 | 009942 (6) | ref|XP_011073689.1| | 1e-15 | PREDICTED: 60S ribosomal protein L26-1 [Sesamum indicum] ref|XP_011099373.1| PRE | 617 | 009942 (6) | gb|EYU29627.1| | 1e-73 | hypothetical protein MIMGU_mgv1a015787mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
rJMFF013K14- AATTTAAAGGTGCAGATATTCAA
rJMSF017E03- AAGGTGCAGATATTCAA
____________________________________________________________
consensus AATTTAAAGGTGCAGATATTCAA
. : . : . : . : . : . :
JMFF008O02+ ATTGAACAATGGATAAAAAGTAGCAGGAAATATAACAA
rJMFF013K14- AAAG-AACACTAATCCTCACTGATTGAACAATGGATAAAAAGTAGCAGGAAATATAACAA
rJMSF017E03- AAAGTAACACTAATCCTCACTGATTGAACAATGGATAAAAAGTAGCAGGAAATATAACAA
____________________________________________________________
consensus AAAGTAACACTAATCCTCACTGATTGAACAATGGATAAAAAGTAGCAGGAAATATAACAA
. : . : . : . : . : . :
rJMFF008O02- GTGAACTTGGTGCCCTTCTCC
JMFN039E03+ GTGAACTTGGTGCCCTTCTCC
JMFF008O02+ CCTCAAAATCAATCGACTGTTTGCATGATATCCTCAGTTGTGAACTTGGTGCCCTTCTCC
rJMFF013K14- CCTCAAAATCAATCGACTGTTTGCATGATATCCTCAGTTGTGAACTTGGTGCCCTTCTCC
rJMSF017E03- CCTCAAAATCAATCGACTGTTTGCATGATATCCTCAGTTGTGAACTTGGTGCCCTTCTCC
____________________________________________________________
consensus CCTCAAAATCAATCGACTGTTTGCATGATATCCTCAGTTGTGAACTTGGTGCCCTTCTCC
. : . : . : . : . : . :
rJMFF008O02- TTGTCGGCGGCGGCGCGGCCCTTAGCCTTGCGTTCGAGCAGGGACTTGCGGTCCTTGTCG
JMFN039E03+ TTGTCGGCGGCGGCGCGGCCCTTAGCCTTGCGTTCGAGCAGGGACTTGCGGTCCTTGTCG
JMFF008O02+ TTGTCGGCGGCGGCGCGGCCCTTAGCCTTGCGTTCGAGCAGGGACTTGCGGTCCTTGTCG
rJMFF013K14- TTGTCGGCGGCGGCGCGGCCCTTAGCCTTGCGTTCGAGCAGGGACTTGCGGTCCTTGTCG
rJMSF017E03- TTGTCGGCGGCGGCGCGGCCCTTAGCCTTGCGTTCGAGCAGGGACTTGCGGTCCTTGTCG
____________________________________________________________
consensus TTGTCGGCGGCGGCGCGGCCCTTAGCCTTGCGTTCGAGCAGGGACTTGCGGTCCTTGTCG
. : . : . : . : . : . :
rJMFF008O02- AGGCGGAGCTTGGTGATAACGACCTTGGAGGGGTGGATGCCGACGTTGACGGTGGATCCG
JMFN039E03+ AGGCGGAGCTTGGTGATAACGACCTTGGAGGGGTGGATGCCGACGTTGACGGTGGATCCG
JMFF008O02+ AGGCGGAGCTTGGTGATAACGACCTTGGAGGGGTGGATGCCGACGTTGACGGTGGATCCG
rJMFF013K14- AGGCGGAGCTTGGTGATAACGACCTTGGAGGGGTGGATGCCGACGTTGACGGTGGATCCG
rJMSF017E03- AGGCGGAGCTTGGTGATAACGACCTTGGAGGGGTGGATGCCGACGTTGACGGTGGATCCG
____________________________________________________________
consensus AGGCGGAGCTTGGTGATAACGACCTTGGAGGGGTGGATGCCGACGTTGACGGTGGATCCG
. : . : . : . : . : . :
rJMFF008O02- TTAACCTTCTCGCGGGTAATGCGCTCGATGTGGATGACCCATTTCTTACGGTAGACCTGG
JMFN039E03+ TTAACCTTCTCGCGGGTAATGCGCTCGATGTGGATGACCCATTTCTTACGGTAGACCTGG
JMFF008O02+ TTAACCTTCTCGCGGGTAATGCGCTCGATGTGGATGACCCATTTCTTACGGTAGACCTGG
rJMFF013K14- TTAACCTTCTCGCGGGTAATGCGCTCGATGTGGATGACCCATTTCTTACGGTAGACCTGG
rJMSF017E03- TTAACCTTCTCGCGGGTAATGCGCTCGATGTGGATGACCCATTTCTTACGGTAGACCTGG
____________________________________________________________
consensus TTAACCTTCTCGCGGGTAATGCGCTCGATGTGGATGACCCATTTCTTACGGTAGACCTGG
. : . : . : . : . : . :
rJMFF008O02- ACGACCTTGCCCTCGCGGCCCTTGTAGGTCCCGCGCACCACCTGAACCTCGTCGTCTTTC
JMFN039E03+ ACGACCTTGCCCTCGCGGCCCTTGTAGGTCCCGCGCACCACCTGAACCTCGTCGTCTTTC
JMFF008O02+ ACGACCTTGCCCTCGCGGCCCTTGTAGGTCCCGCGCACCACCTGAACCTCGTCGTCTTTC
rJMFF013K14- ACGACCTTGCCCTCGCGGCCCTTGTAGGTCCCGCGCACCACCTGAACCTCGTCGTCTTTC
JMSF017E03+ TC
rJMSF017E03- ACGACCTTGCCCTCGCGGCCCTTGTAGGTCCCGCGCACCACCTGAACCTCGTCGTCTTTC
____________________________________________________________
consensus ACGACCTTGCCCTCGCGGCCCTTGTAGGTCCCGCGCACCACCTGAACCTCGTCGTCTTTC
. : . : . : . : . : . :
rJMFF008O02- CTCACCGGCATCGACCTCACGTTGTACTTGGAGCGCATGTCGCCGGACAAGGGCGCGCTC
JMFN039E03+ CTCACCGGCATCGACCTCACGTTGTACTTGGAGCGCATGTCGCCGGACAAGGGCGCGCTC
JMFF008O02+ CTCACCGGCATCGACCTCACGTTGTACTTGGAGCGCATGTCGCCGGACAAGGGCGCGCTC
rJMFF013K14- CTCACCGGCATCGACCTCACGTTGTACTTGGAGCGCATGTCGCCGGACAAGGGCGCGCTC
JMSF017E03+ CTCACCGGCATCGACCTCACGTTGTACTTGGAGCGCATGTCGCCGGACAAGGGCGCGCTC
rJMSF017E03- CTCACCGGCATCGACCTCACGTTGTACTTGGAGCGCATGTCGCCGGACAAGGGCGCGCTC
____________________________________________________________
consensus CTCACCGGCATCGACCTCACGTTGTACTTGGAGCGCATGTCGCCGGACAAGGGCGCGCTC
. : . : . : . : . : . :
rJMFF008O02- ATAATCACGCGCCGCGCGCTAGACGGGGCCGTGAAGTGAGCCTTCCTGCTCTTGCGGCGG
JMFN039E03+ ATAATCACGCGCCGCGCGCTAGACGGGGCCGTGAAGTGAGCCTTCCTGCTCTTGCGGCGG
JMFF008O02+ ATAATCACGCGCCGCGCGCTAGACGGGGCCGTGAAGTGAGCCTTCCTGCTCTTGCGGCGG
rJMFF013K14- ATAATCACGCGCCGCGCGCTAGACGGGGCCGTGAAGTGAGCCTTCCTGCTCTTGCGGCGG
JMSF017E03+ ATAATCACGCGCCGCGCGCTAGACGGGGCCGTGAAGTGAGCCTTCCTGCTCTTGCGGCGG
rJMSF017E03- ATAATCACGCGCCGCGCGCTAGACGGGGCCGTGAAGTGAGCCTTCCTGCTCTTGCGGCGG
____________________________________________________________
consensus ATAATCACGCGCCGCGCGCTAGACGGGGCCGTGAAGTGAGCCTTCCTGCTCTTGCGGCGG
. : . : . : . : . : . :
rJMFF008O02- GAGGACGACACTCGGGGATTGTACTTCATCTTCGACGCCGATCCTTCTCTCTACCGCTCT
JMFN039E03+ GAGGACGACACTCGGGGATTGTACTTCATCTTCGACGCCGATCCTTCTCTCTACCGCTCT
JMFF008O02+ GAGGACGACACTCGGGGATTGTACTTCATCTTCGACGCCGATCCTTCTCTCTACCGCTCT
rJMFF013K14- GAGGACGACACTCGGGGATTGTACTTCATCTTCGACGCCGATCCTTCTCTCTACCGCTCT
JMSF017E03+ GAGGACGACACTCGGGGATTGTACTTCATCTTCGACGCCGATCCTTCTCTCTACCGCTCT
rJMSF017E03- GAGGACGACACTCGGGGATTGTACTTCATCTTCGACGCCGATCCTTCTCTCTACCGCTCT
____________________________________________________________
consensus GAGGACGACACTCGGGGATTGTACTTCATCTTCGACGCCGATCCTTCTCTCTACCGCTCT
. : . : . : . : . : . :
rJMFF008O02- CTCCTCTCGTCTCCAATTGCTGCTGCTGCGCTGTT
JMFN039E03+ CTC
JMFF008O02+ CTCCTCTCGTCTCCAATTGCTGCTGCTGCGCTGTT
rJMFF013K14- CTCCTCTCGTCTCCAATTGCTGCTGCTGCGCTGTTA
JMSF017E03+ CTCCTCTCGTCTCCAATTGCTGCTGCTGCGCTGTTAGTAGCAAAAATGGAGCTAGGGTCC
rJMSF017E03- CTCCTCTCGTCTCCAATTGCTGCTGCTGCGCTGTTAGTAGCAAAAATGGAGCTAGGGTCC
____________________________________________________________
consensus CTCCTCTCGTCTCCAATTGCTGCTGCTGCGCTGTTAGTAGCAAAAATGGAGCTAGGGTCC