| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018I21 | Sequence | 407 | 009938 (6) | gb|KDP21033.1| | 5e-15 | hypothetical protein JCGZ_21504 [Jatropha curcas] | 732 | 009938 (6) | ref|XP_004244770.1| | 67.0 | PREDICTED: uncharacterized protein LOC101256311 [Solanum lycopersicum] |
| JMSF016K03 | Sequence | 501 | 009938 (6) | ref|XP_004485856.1| | 2e-16 | PREDICTED: WUSCHEL-related homeobox 9-like isoform X1 [Cicer arietinum] | 767 | 009938 (6) | ref|XP_009760029.1| | 3e-31 | PREDICTED: uncharacterized protein LOC104212461 isoform X3 [Nicotiana sylvestri |
| JMSF029I09 | Sequence | 656 | 009938 (6) | ref|XP_003593686.1| | 7e-21 | WUSCHEL-related homeobox [Medicago truncatula] gb|AES63937.1| wuschel homeobox p | 739 | 009938 (6) | ref|XP_004244770.1| | 71.2 | PREDICTED: uncharacterized protein LOC101256311 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFF018I21- GCACC
JMSF016K03- TGAATGAGCACC
JMSF029I09- GCACC
____________________________________________________________
consensus TGAATGAGCACC
. : . : . : . : . : . :
JMFF018I21- GCGTCATCCCCAAACGCCGCCTTCATGTTGAAGTGCGCCGCCGCGACCTCGAATGCCAAA
JMSF016K03- GCGTCATCCCCAAACGCCGCCTTCATGTTGAAGTGCGCCGCCGCGACCTCGAATGCCAAA
JMSF029I09- GCGTCATCCCCAAACGCCGCCTTCATGTTGAAGTGCGCCGCCGCGACCTCGAATGCCAAA
____________________________________________________________
consensus GCGTCATCCCCAAACGCCGCCTTCATGTTGAAGTGCGCCGCCGCGACCTCGAATGCCAAA
. : . : . : . : . : . :
JMFF018I21- TCAGTTTATAAACTCCGTCGATTTTGCAGGACCTGCCACTGTGCCGGTGATTCGCAGAAT
JMSF016K03- TCAGTTTATAAACTCCGTCGATTTTGCAGGACCTGCCACTGTGCCGGTGATTCGCAGAAT
JMSF029I09- TCAGTTTATAAACTCCGTCGATTTTGCAGGACCTGCCACTGTGCCGGTGATTCGCAGAAT
____________________________________________________________
consensus TCAGTTTATAAACTCCGTCGATTTTGCAGGACCTGCCACTGTGCCGGTGATTCGCAGAAT
. : . : . : . : . : . :
JMFF018I21- CATTAGGAGATGATTTCCCGGAAGAAGACGATGACGAAGAAGGTGAGGGGCCGGCTATGA
JMSF016K03- CATTAGGAGATGATTTCCCGGAAGAAGACGATGACGAAGAAGGTGAGGGGCCGGCTATGA
JMSF029I09- CATTAGGAGATGATTTCCCGGAAGAAGACGATGACGAAGAAGGTGAGGGGCCGGCTATGA
____________________________________________________________
consensus CATTAGGAGATGATTTCCCGGAAGAAGACGATGACGAAGAAGGTGAGGGGCCGGCTATGA
. : . : . : . : . : . :
JMFF018I21- GAGGAGAAGTGGGGTTTTGTTGTTGCTGAAAAGTTTGCGGCGGCGGTGTCGATTANGTGG
JMSF016K03- GAGGAGAAGTGGGGTTTTGTTGTTGCTGAAAAGTTTGCGGCGGCGGTGTCGATTAGGTGG
JMSF029I09- GAGGAGAAGTGGGGTTTTGTTGTTGCTGAAAAGTTTGCGGCGGCGGTGTCGATTAGGTGG
____________________________________________________________
consensus GAGGAGAAGTGGGGTTTTGTTGTTGCTGAAAAGTTTGCGGCGGCGGTGTCGATTAGGTGG
. : . : . : . : . : . :
JMFF018I21- AGGTTTAGACGTGGTGGAGTTTGTGCTTGGTTCTTGATTTTCTGATCTGGAACCAATAGA
JMSF016K03- AGGTTTAGACGTGGTGGAGTTTGTGCTTGGTTCTTGATTTTCTGATCTGGAACCAATAGA
JMSF029I09- AGGTTTAGACGTGGTGGAGTTTGTGCTTGGTTCTTGATTTTCTGATCTGGAACCAATAGA
____________________________________________________________
consensus AGGTTTAGACGTGGTGGAGTTTGTGCTTGGTTCTTGATTTTCTGATCTGGAACCAATAGA
. : . : . : . : . : . :
JMFF018I21- AGACTTTGGCGTCGCCGATTTGACCGTCCATTCCAGAATTGAAGATAACTTCAAGAATGC
JMSF016K03- AGACTTTGGCGTCGCCGATTTGACCGTCCATTCCAGAATTGAAGATAACTTCAAGAATGC
JMSF029I09- AGACTTTGGCGTCGCCGATTTGACCGTCCATTCCAGAATTGAAGATAACTTCAAGAATGC
____________________________________________________________
consensus AGACTTTGGCGTCGCCGATTTGACCGTCCATTCCAGAATTGAAGATAACTTCAAGAATGC
. : . : . : . : . : . :
JMFF018I21- GTATTTAATCTGGCTTCGGATTCCATCTCGCCTTTGG
JMSF016K03- GTATTTAATCTGGCTTCGGATTCCATCTCGCCTTTGGCTCTGGAGCGCTC-TCTCTTCAC
JMSF029I09- GTATTTAATCTGGCTTCGGATTCCATCTCGCCTTTGGCTCTGGAGCGCTCATCTCTTCAC
____________________________________________________________
consensus GTATTTAATCTGGCTTCGGATTCCATCTCGCCTTTGGCTCTGGAGCGCTCATCTCTTCAC
. : . : . : . : . : . :
JMSF016K03- TCCCACCAGTTGAAGGGGCTGTTAACGGTGGTTTGAGGGAAGAGCTGAGAATGTCACGGT
JMSF029I09- TCCCACCAGTTGAAGGGGCTGTTAACGGTGGTTTGAGGGAAGAGCTGAGAATGTCACGGT
____________________________________________________________
consensus TCCCACCAGTTGAAGGGGCTGTTAACGGTGGTTTGAGGGAAGAGCTGAGAATGTCACGGT
. : . : . : . : . : . :
JMSF016K03- GGCAGTGCCA
JMSF029I09- GGCAGTGCCATGGGTGGAGAGTGTTGCTAGGCCAGTGTCTCTTTGATGAAGACATTGATG
rJMSF029I09+ GTGCCATGGGNGGAGAGTGTTGCTAGGCCAGTGTCTCTTTGATGAAGACATTGATG
rJMFF018I21+ TGATGAAGACATTGATG
____________________________________________________________
consensus GGCAGTGCCATGGGTGGAGAGTGTTGCTAGGCCAGTGTCTCTTTGATGAAGACATTGATG
. : . : . : . : . : . :
JMSF029I09- AATGATGAATGCATTCAATGGAAGCCCCAAAACCCACCTTTTATTTTAATTTGCTGCTCT
rJMSF029I09+ AATGATGAATGCATTCAATGGAAGCCCCAAAACCCACCTTTTATTTTAATTTGCTGCTCT
rJMFF018I21+ AATGATGAATGCATTCAATGGAAGCCCCAAAACCCACCTTTTATTTTAATTTGCTGCTCT
____________________________________________________________
consensus AATGATGAATGCATTCAATGGAAGCCCCAAAACCCACCTTTTATTTTAATTTGCTGCTCT
. : . : . : . : . : . :
JMSF029I09- CTCCCTCTCTTGTTTTTGACAATTCATAATGTTCTTTCTTTGTTGGTG
rJMSF029I09+ CTCCCTCTCTTGTTTTTGACAATTCATAATGTTCTTTCTTTGTTGGTGATGAAATTAGGG
rJMFF018I21+ CTCCCTCTCTTGTTTTTGACAATTCATAATGTTCTTTCTTTGTTGGTGATGAAATTAGGG
____________________________________________________________
consensus CTCCCTCTCTTGTTTTTGACAATTCATAATGTTCTTTCTTTGTTGGTGATGAAATTAGGG
. : . : . : . : . : . :
rJMSF029I09+ GGTGTGACATCCATGGACACATTCTTGGAAAGGTTCTTTTCGAAAGTTTATAGAAAGAAT
rJMFF018I21+ GGTGTGACATCCATGGACACATTNTTGGAAAGGTTCTTTTCGAAAGTTTATAGAAAGAAT
____________________________________________________________
consensus GGTGTGACATCCATGGACACATTCTTGGAAAGGTTCTTTTCGAAAGTTTATAGAAAGAAT
. : . : . : . : . : . :
rJMSF029I09+ AACGAGTTGCCAACTTGCCATTACCTGGGTTCCATGTCATTAAACTTGCAGATAATGCTA
rJMFF018I21+ AACGAGTTGCCAACTTGCCATTACCTGGGTTCCATGTCATTAAACTTGCAGATAATGCTA
rJMSF016K03+ ATAATGCTA
____________________________________________________________
consensus AACGAGTTGCCAACTTGCCATTACCTGGGTTCCATGTCATTAAACTTGCAGATAATGCTA
. : . : . : . : . : . :
rJMSF029I09+ ACCTAGCTTCAGGTGCTTTATCACTACAGCTAGATCACTTATTGGATGATGCAATTAAGA
rJMFF018I21+ ACCTAGCTTCAGGTGCTTTATCACTACAGCTAGATCACTTATTGGATGATGCAATTAAGA
rJMSF016K03+ ACCTAGCTTCAGGTGCTTTATCACTACAGCTAGATCACTTATTGGATGATGCAATTAAGA
____________________________________________________________
consensus ACCTAGCTTCAGGTGCTTTATCACTACAGCTAGATCACTTATTGGATGATGCAATTAAGA
. : . : . : . : . : . :
rJMSF029I09+ AACTTGGGTTGAAGATAGCAGAGGGAGGATCCTATCTATTCAATTCAAGTCGCTTCTCGC
rJMFF018I21+ AACTTGGGTTGAAGATAGCAGAGGGAGGATCCTATNTATTCAATTCAAGTCGCTTNTCGC
rJMSF016K03+ AACTTGGGTTGAAGATAGCAGAGGGAGGATCCTATCTATTCAATTCAAGTCGCTTCTCGC
____________________________________________________________
consensus AACTTGGGTTGAAGATAGCAGAGGGAGGATCCTATCTATTCAATTCAAGTCGCTTCTCGC
. : . : . : . : . : . :
rJMSF029I09+ TAACAATGCACAAATAGTGTTTGGCTCTGATTGGCCAGTAGCAGATATTAATCCATTGAG
rJMFF018I21+ TAACAATGCACAAATAGTGTTTGGCTNTGATTGGCCAGTAGCAGATATTAATCCATTGAG
rJMSF016K03+ TAACAATGCACAAATAGTGTTTGGCTCTGATTGGCCAGTAGCAGATATTAATCCATTGAG
____________________________________________________________
consensus TAACAATGCACAAATAGTGTTTGGCTCTGATTGGCCAGTAGCAGATATTAATCCATTGAG
. : . : . : . : . : . :
rJMSF029I09+ AAGCATAGCGACAGCAATGAAAAGAATGCCTGCCAGTCAACAAAAGGACGTTGGATTCCA
rJMFF018I21+ AAGCATAGCGACAGCAATGAAAAGAATGCCTGCCAGTCAACAAAAGGACGTTGGATTCCA
rJMSF016K03+ AAGCATAGCGACAGCAATGAAAAGAATGCCTGCCAGTCAACAAAAGGACGTTGGATTCCA
____________________________________________________________
consensus AAGCATAGCGACAGCAATGAAAAGAATGCCTGCCAGTCAACAAAAGGACGTTGGATTCCA
. : . : . : . : . : . :
rJMSF029I09+ TCAGAACGCNTGAGTNTAAACGAGGCNCTAGATGTG
rJMFF018I21+ TCAGAACGCATGAGTNTAAACGAGGCACTAGATGTG
rJMSF016K03+ TCAGAACGCATGAGTCTAAACGAGGCACTAGATGTGACCTTGGATTTAACTGATGTCAAG
____________________________________________________________
consensus TCAGAACGCATGAGTCTAAACGAGGCACTAGATGTGACCTTGGATTTAACTGATGTCAAG
. : . : . : . : . : . :
rJMSF016K03+ TATACAATCTCGGCTGCTCGCGCATGCTTCCTTGACAAATTAAAGATGTTGGATCACTCA
____________________________________________________________
consensus TATACAATCTCGGCTGCTCGCGCATGCTTCCTTGACAAATTAAAGATGTTGGATCACTCA
. : . : . : . : . : . :
rJMSF016K03+ CTCTCTCCTGGGAAGCTGGCAGATTTTGTGGTTTTGTCTACTGATTCATGGGATTCTTTT
____________________________________________________________
consensus CTCTCTCCTGGGAAGCTGGCAGATTTTGTGGTTTTGTCTACTGATTCATGGGATTCTTTT
. : . : . : . : . : . :
rJMSF016K03+ GCAAGTGATGGATTTGCCTCGGTTCAAGCAACAAATCACAAAAAGACCAAGGCTGATTAC
____________________________________________________________
consensus GCAAGTGATGGATTTGCCTCGGTTCAAGCAACAAATCACAAAAAGACCAAGGCTGATTAC
. : . : . : . : . : . :
rJMSF016K03+ GAGATGGAACTTGAGAGAGAATGAAATACATTGTAATGTGTATACTTCTTTCCTGTAGTA
____________________________________________________________
consensus GAGATGGAACTTGAGAGAGAATGAAATACATTGTAATGTGTATACTTCTTTCCTGTAGTA
. : . : . : . : . : . :
rJMSF016K03+ TATTTCAATGCTTAAACTAGAAATTGTGACACCCTCCTAAACACCATACACTGGAAACTT
____________________________________________________________
consensus TATTTCAATGCTTAAACTAGAAATTGTGACACCCTCCTAAACACCATACACTGGAAACTT
. : . : . : . : . : . :
rJMSF016K03+ GGAGGTTTTGCCTTTTAAACTTCAAGAAACATGTACGACCAGGCCTGAAAATTGCATAAC
____________________________________________________________
consensus GGAGGTTTTGCCTTTTAAACTTCAAGAAACATGTACGACCAGGCCTGAAAATTGCATAAC