Contig 009936:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF016H13-           TGTCGGTCCCATGTACCGGAACGCTTCGTTCTTCCTCAGGAGCTACGCGGAAATGGAGAA
                      ____________________________________________________________
consensus             TGTCGGTCCCATGTACCGGAACGCTTCGTTCTTCCTCAGGAGCTACGCGGAAATGGAGAA
 
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JMSF016H13-           AACATTGAAGGTATATGTGTACGAGGATGGACAGCCGCCGGTGGCTCATTACGGTCCCTG
                      ____________________________________________________________
consensus             AACATTGAAGGTATATGTGTACGAGGATGGACAGCCGCCGGTGGCTCATTACGGTCCCTG
 
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JMSF016H13-           CAAGAGCACATACGCAATCGAAGGTAATTTCATTCATGCAATGGATTTTAGCCGTTTCCG
                      ____________________________________________________________
consensus             CAAGAGCACATACGCAATCGAAGGTAATTTCATTCATGCAATGGATTTTAGCCGTTTCCG
 
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JMSF016H13-           CACCACCGATCCCGACAAAGCCCACCTTTACTTCCTCCCCTTCAGCATCACCGTCCTCAG
                      ____________________________________________________________
consensus             CACCACCGATCCCGACAAAGCCCACCTTTACTTCCTCCCCTTCAGCATCACCGTCCTCAG
 
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JMSF016H13-           CAAACTGGTTTATGAACCAAACTCCCATGATTGGAGTCCGATGAAGATAACTGCTTTGGA
                      ____________________________________________________________
consensus             CAAACTGGTTTATGAACCAAACTCCCATGATTGGAGTCCGATGAAGATAACTGCTTTGGA
 
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JMSF016H13-           TTATGTCAACTCTGTTGCGAGGAAATACCCTTTCTGGAATCGCTCCCTCGGCGCCGATCA
                      ____________________________________________________________
consensus             TTATGTCAACTCTGTTGCGAGGAAATACCCTTTCTGGAATCGCTCCCTCGGCGCCGATCA
 
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JMSF016H13-           CTTCATCCTTTCTTGCCATGATTGGGGGCCGGAAATATCATTCGCAATTCCGAATCTGCA
rJMSF030L13+                         CCATGATTGGGGGCCGGAAATATCATTCGCAATTCCGAATCTGCA
rJMSF016H13+                         CCATGATTGGGGGCCGGAAATATCATTCGCAATTCCGAATCTGCA
                      ____________________________________________________________
consensus             CTTCATCCTTTCTTGCCATGATTGGGGGCCGGAAATATCATTCGCAATTCCGAATCTGCA
 
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JMSF016H13-           CAATAATTCCATCCGGGCATTATGCAACGCCAACACCTCAGAGCGGTTCGACCCGAAGAA
rJMSF030L13+          CAATAATTCCATCCGGGCATTATGCAACGCCAACACCTCAGAGCGGTTCGACCCGAAGAA
rJMSF016H13+          CAATAATTCCATCCGGGCATTATGCAACGCCAACACCTCAGAGCGGTTCGACCCGAAGAA
                      ____________________________________________________________
consensus             CAATAATTCCATCCGGGCATTATGCAACGCCAACACCTCAGAGCGGTTCGACCCGAAGAA
 
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JMSF016H13-           GGACGTATCCATCCCGGAAATCGTCCTCCCGTCCGGCACGACGAANGGCTTGCTCGGCGG
rJMSF030L13+          GGACGTATCCATCCCGGAAATCGTCCTCCCGTCCGGCACGACGAAGGGCTTGCTCGGCGG
rJMSF016H13+          GGACGTATCCATCCCGGAAATCGTCCTCCCGTCCGGCACGACGAAGGGCTTGCTCGGCGG
                      ____________________________________________________________
consensus             GGACGTATCCATCCCGGAAATCGTCCTCCCGTCCGGCACGACGAAGGGCTTGCTCGGCGG
 
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JMSF016H13-           CCCGTCGCCGTCCAAACGCCCGGTCCTGGTGTTCTACG                      
rJMSF030L13+          CCCGTCGCCGTCCAAACGCCCGGTCCTGGTGTTCTACGCCGGCGGGCTGCACGGCCCAGT
rJMSF016H13+          CCCGTCGCCGTCCAAACGCCCGGTCCTGGTGTTCTACGCCGGCGGGCTGCACGGCCCAGT
                      ____________________________________________________________
consensus             CCCGTCGCCGTCCAAACGCCCGGTCCTGGTGTTCTACGCCGGCGGGCTGCACGGCCCAGT
 
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rJMSF030L13+          CCGGCCAATTCTGCTGCAGCACTGGGAGAACAAAGACGAAGATGTTCAGGTCCACAGCTA
rJMSF016H13+          CCGGCCAATTCTGCTGCAGCACTGGGAGAACAAAGACGAAGATGTTCAGGTCCACAGCTA
                      ____________________________________________________________
consensus             CCGGCCAATTCTGCTGCAGCACTGGGAGAACAAAGACGAAGATGTTCAGGTCCACAGCTA
 
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rJMSF030L13+          TCTCCCGAAGGGCGTGTCGTACAACGGAATGATGCGGAAAAGTAGGTACTGCATCTGCCC
rJMSF016H13+          TCTCCCGAAGGGCGTGTCGTACAACGGAATGATGCGGAAAAGTAGGTACTGCATCTGCCC
                      ____________________________________________________________
consensus             TCTCCCGAAGGGCGTGTCGTACAACGGAATGATGCGGAAAAGTAGGTACTGCATCTGCCC
 
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rJMSF030L13+          TAGCGGGTACGAGGTTGCCAGTCCGAGAATGGTGGAGGCGCTGTACATGGGGTGTGTCCC
rJMSF016H13+          TAGCGGGTACGAGGTTGCCAGTCCGAGAATGGTGGAGGCGCTGTACATGGGGTGTGTCCC
                      ____________________________________________________________
consensus             TAGCGGGTACGAGGTTGCCAGTCCGAGAATGGTGGAGGCGCTGTACATGGGGTGTGTCCC
 
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rJMSF030L13+          CGTGCTCATAAAACGCGGCTACGTGGCGCCGTTCAGTGATGTGTTGAACTGGGAGGCGTT
rJMSF016H13+          CGTGCTCATAAAACGCGGCTACGTGGCGCCGTTCAGTGATGTGTTGAACTGGGAGGCGTT
                      ____________________________________________________________
consensus             CGTGCTCATAAAACGCGGCTACGTGGCGCCGTTCAGTGATGTGTTGAACTGGGAGGCGTT
 
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rJMSF030L13+          TGCGGTTATTATTCCGGTGGAGGACATCCCTAACCTCAAGAAAATCTTGACGGGAATTTC
rJMSF016H13+          TGCGGTTATTATTCCGGTGGAGGACATCCCTAACCTCAAGAAAATCTTGACGGGAATTTC
                      ____________________________________________________________
consensus             TGCGGTTATTATTCCGGTGGAGGACATCCCTAACCTCAAGAAAATCTTGACGGGAATTTC
 
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rJMSF030L13+          GCAGAGACAGTACATAAGGATGCAGAGGAGAGGAGTTAAGGTTAGGAGGCATTTTGAGGT
rJMSF016H13+          GCAGAGACAGTACATAAGGATGCAGAGGAGAGGAGTTAAGGTTAGGAGGCATTTTGAGGT
                      ____________________________________________________________
consensus             GCAGAGACAGTACATAAGGATGCAGAGGAGAGGAGTTAAGGTTAGGAGGCATTTTGAGGT
 
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rJMSF030L13+          TAATTCTCCGCCTAAACGTTTTGATGTCTTCCACATGATTCTCCATTCCATTTGGCTTAG
rJMSF016H13+          TAATTCTCCGCCTAAACGTTTTGATGTCTTCCACATGATTCTCCATTCCATTTGGCTTAG
                      ____________________________________________________________
consensus             TAATTCTCCGCCTAAACGTTTTGATGTCTTCCACATGATTCTCCATTCCATTTGGCTTAG
 
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rJMSF030L13+          AAGGCTCAATGTTCGACTTCACCATCTCAATG                            
rJMSF016H13+          AAGGCTCAATGTTCGACTTCACCATCTCAATGTGTAACACTTTAATCTAAATTTTTACAA
                      ____________________________________________________________
consensus             AAGGCTCAATGTTCGACTTCACCATCTCAATGTGTAACACTTTAATCTAAATTTTTACAA
 
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rJMSF016H13+          AAAAGTTTTCAGTTTCAGATCATTTTTTCTGGTACATACATAATTGTTTGCTCATCCATG
                      ____________________________________________________________
consensus             AAAAGTTTTCAGTTTCAGATCATTTTTTCTGGTACATACATAATTGTTTGCTCATCCATG