| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF013D10 | Sequence | 583 | 009929 (36) | ref|XP_009780966.1| | 1e-22 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | 643 | 009929 (36) | ref|XP_011071173.1| | 7e-47 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam |
| JMFF032D21 | Sequence | 615 | 009929 (36) | ref|XP_009780966.1| | 2e-32 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | 693 | 009929 (36) | ref|XP_011071173.1| | 4e-47 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam |
| JMFF050I13 | Sequence | 627 | 009929 (36) | 599 | 009929 (36) | ref|XP_004142959.1| | 4e-33 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Cucum | |||
| JMFN006L24 | Sequence | 621 | 009929 (36) | ref|XP_009780966.1| | 4e-47 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN007O07 | Sequence | 615 | 009929 (36) | ref|XP_009780966.1| | 4e-45 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN008B10 | Sequence | 627 | 009929 (36) | ref|XP_011071173.1| | 3e-47 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam | |||||
| JMFN009E11 | Sequence | 642 | 009929 (36) | ref|XP_011071173.1| | 3e-47 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam | |||||
| JMFN010I08 | Sequence | 625 | 009929 (36) | ref|XP_009780966.1| | 6e-52 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN011K09 | Sequence | 612 | 009929 (36) | ref|XP_008444395.1| | 3e-35 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Cucumis me | |||||
| JMFN014H15 | Sequence | 614 | 009929 (36) | ref|XP_009780966.1| | 1e-37 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN015P02 | Sequence | 596 | 009929 (36) | ref|XP_009780966.1| | 1e-40 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN016G22 | Sequence | 612 | 009929 (36) | ref|XP_009780966.1| | 5e-40 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN016N11 | Sequence | 605 | 009929 (36) | ref|XP_007044927.1| | 1e-45 | Photosystem II core complex proteins psbY [Theobroma cacao] gb|EOY00759.1| Photo | |||||
| JMFN017P09 | Sequence | 632 | 009929 (36) | ref|XP_009780966.1| | 5e-41 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN018I13 | Sequence | 641 | 009929 (36) | ref|XP_009780966.1| | 2e-50 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN019N23 | Sequence | 627 | 009929 (36) | ref|XP_009780966.1| | 5e-37 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN025C23 | Sequence | 626 | 009929 (36) | ref|XP_007044927.1| | 2e-45 | Photosystem II core complex proteins psbY [Theobroma cacao] gb|EOY00759.1| Photo | |||||
| JMFN033L16 | Sequence | 618 | 009929 (36) | ref|XP_009780966.1| | 8e-37 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN035P06 | Sequence | 644 | 009929 (36) | ref|XP_009780966.1| | 2e-35 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN036B15 | Sequence | 594 | 009929 (36) | ref|XP_009780966.1| | 1e-42 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMFN036D02 | Sequence | 545 | 009929 (36) | ref|XP_011071173.1| | 3e-32 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam | |||||
| JMFN036L20 | Sequence | 532 | 009929 (36) | ref|XP_008444395.1| | 1e-26 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Cucumis me | |||||
| JMFN038C14 | Sequence | 613 | 009929 (36) | ref|XP_009780966.1| | 5e-35 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | |||||
| JMSF002N12 | Sequence | 281 | 009929 (36) | ref|XP_009780966.1| | 7e-04 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | 700 | 009929 (36) | ref|XP_011071173.1| | 3e-47 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam |
| JMSF015D21 | Sequence | 255 | 002165 (4) | 736 | 009929 (36) | ref|XP_009797447.1| | 5e-58 | PREDICTED: auxin response factor 9-like [Nicotiana sylvestris] | |||
| JMSF019E19 | Sequence | 250 | 009929 (36) | ref|XP_009780966.1| | 3e-09 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Nicotiana | 674 | 009929 (36) | ref|XP_011071173.1| | 5e-47 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam |
| JMSF029N07 | Sequence | 607 | 013412 (2) | gb|KDP28473.1| | 2e-31 | hypothetical protein JCGZ_14244 [Jatropha curcas] | 749 | 009929 (36) | ref|XP_009797447.1| | 1e-57 | PREDICTED: auxin response factor 9-like [Nicotiana sylvestris] |
| JMSF034P04 | Sequence | 697 | 009929 (36) | ref|XP_011071173.1| | 2e-27 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam | 700 | 009929 (36) | ref|XP_011071173.1| | 7e-47 | PREDICTED: photosystem II core complex proteins psbY, chloroplastic-like [Sesam |
| JMSF036N13 | Sequence | 660 | 013412 (2) | gb|KDP28473.1| | 4e-62 | hypothetical protein JCGZ_14244 [Jatropha curcas] | 750 | 009929 (36) | ref|XP_009797447.1| | 1e-44 | PREDICTED: auxin response factor 9-like [Nicotiana sylvestris] |
| JMSF042K17 | Sequence | 412 | 011650 (27) | ref|XP_009796885.1| | 2e-79 | PREDICTED: methionine gamma-lyase-like [Nicotiana sylvestris] | 758 | 009929 (36) | ref|XP_009797447.1| | 5e-58 | PREDICTED: auxin response factor 9-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF050I13- CCTTAT
____________________________________________________________
consensus CCTTAT
. : . : . : . : . : . :
rJMFF050I13- GGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTGGTTTAAGATTTGTTTATTTCCTTT
____________________________________________________________
consensus GGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTTGGTTTAAGATTTGTTTATTTCCTTT
. : . : . : . : . : . :
rJMFF050I13- TCAATGAAGTATCACACATAGATTTCAAGAATCACCAGAGTAATTAAGCTGGTCTTCAAA
____________________________________________________________
consensus TCAATGAAGTATCACACATAGATTTCAAGAATCACCAGAGTAATTAAGCTGGTCTTCAAA
. : . : . : . : . : . :
rJMFF050I13- AAAGAAAAAGTTGATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
JMFN025C23+ TGATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
JMFN016N11+ TGATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
rJMFF013D10- TGATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
JMFN008B10+ ATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
rJMFF032D21- ATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
rJMSF002N12- CAAAATACTTGGGAAGTACATGTAAAGCA
JMFN035P06+ GTAAAGCA
rJMSF019E19- AATACTTGGGAAGTACATGTAAAGCA
JMFN009E11+ GGAAGTACATGTAAAGCA
JMFN010I08+ GTACATGTAAAGCA
JMFN018I13+ TGGGAAGTACATGTAAAGCA
rJMSF034P04- AAAATACTTGGGAAGTACATGTAAAGCA
____________________________________________________________
consensus AAAGAAAAAGTTGATTGATATTTGATACATACAAAATACTTGGGAAGTACATGTAAAGCA
. : . : . : . : . : . :
rJMFF050I13- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN025C23+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN016N11+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
rJMFF013D10- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN008B10+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
rJMFF032D21- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFF032D21+ GGTTCAGAGCAGGCTGCAAAATGTTGTA
rJMSF002N12- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN035P06+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTT-TA
rJMSF019E19- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN009E11+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN010I08+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN018I13+ GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN006L24+ TGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN014H15+ ATGTTGTA
JMFN016G22+ GCAGGCTGCANAATGTTGTA
JMFN007O07+ AGCAGGCTGCANAATGTTGTA
JMFN033L16+ TCAGAGCAGGCTGCAAAATG-TGTA
JMFN036B15+ GGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN015P02+ AGCAGGCTGCANAATGTTGTA
JMFN011K09+ TTCAGAGCAGGCTGCAAAATGTTGTA
JMFN017P09+ TCAGAGCAGGCTGCANAATGTTGTA
rJMSF034P04- GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
JMFN019N23+ TGTTGTA
____________________________________________________________
consensus GGACTATTATTCTGATCTCATCTTGTTGAGCTGGTTCAGAGCAGGCTGCAAAATGTTGTA
. : . : . : . : . : . :
rJMFF050I13- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN025C23+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN016N11+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
rJMFF013D10- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN008B10+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
rJMFF032D21- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFF032D21+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
rJMSF002N12- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN035P06+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
rJMSF019E19- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN009E11+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN036D02+ CGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN010I08+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN018I13+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN006L24+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN014H15+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN016G22+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN007O07+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN033L16+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN036B15+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN015P02+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN011K09+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN017P09+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN036L20+ GATGAGCAAGAGTTGGCCCCTGCTGTCGTT
rJMSF034P04- ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN038C14+ CCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
JMFN019N23+ ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
____________________________________________________________
consensus ACCCACCCAGAGCAGAGCCGGGGCGACCACGATGAGCAAGAGTTGGCCCCTGCTGTCGTT
. : . : . : . : . : . :
rJMFF050I13- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN025C23+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN016N11+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
rJMFF013D10- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN008B10+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
rJMFF032D21- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGAAGCTGATGCGGCGTAGGGGTGAATGAA
JMFF032D21+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGAAGCTGATGCGGCGTAGGGGTGAATGAA
rJMSF002N12- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN035P06+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
rJMSF019E19- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN009E11+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN036D02+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN010I08+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN018I13+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN006L24+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN014H15+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN016G22+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN007O07+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN033L16+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN036B15+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN015P02+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN011K09+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN017P09+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN036L20+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
rJMSF034P04- GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN038C14+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
JMFN019N23+ GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
____________________________________________________________
consensus GGCAGCATCGGCCAGTGCCGCCACTTCACTGGCAGCTGATGCGGCGTAGGGGTGAATGAA
. : . : . : . : . : . :
rJMFF050I13- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN025C23+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN016N11+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
rJMFF013D10- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN008B10+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
rJMFF032D21- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFF032D21+ CTGGGCGGCGGTCAGGCCGCCAAGCCCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
rJMSF002N12- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN035P06+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
rJMSF019E19- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN009E11+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN036D02+ CTGGGCGGCGGTCAGGCGGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN010I08+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN018I13+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN006L24+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN014H15+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN016G22+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN007O07+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN033L16+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN036B15+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN015P02+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN011K09+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN017P09+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN036L20+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
rJMSF034P04- CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMSF034P04+ CCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFF013D10+ CCTCA
JMFN038C14+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
JMFN019N23+ CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
____________________________________________________________
consensus CTGGGCGGCGGTCAGGCCGCCAAG-CCCGAGCCCGATGATCACACCCTTGGTGCTCCTCA
. : . : . : . : . : . :
rJMFF050I13- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN025C23+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN016N11+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
rJMFF013D10- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN008B10+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
rJMFF032D21- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFF032D21+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
rJMSF002N12- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN035P06+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
rJMSF019E19- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN009E11+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN036D02+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCCCCCATGCTATGGCTG
JMFN010I08+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN018I13+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN006L24+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN014H15+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN016G22+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN007O07+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN033L16+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN036B15+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN015P02+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN011K09+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN017P09+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN036L20+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
rJMSF034P04- TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMSF034P04+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFF013D10+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN038C14+ TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
JMFN019N23+ TTTTGTTGATATGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
____________________________________________________________
consensus TTTTGTTGATCTGGTTCAGTGCAGGCTGGAGGATGTTGAAGAGCACCCATGCTATGGCTG
. : . : . : . : . : . :
rJMFF050I13- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN025C23+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN016N11+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
rJMFF013D10- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN008B10+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
rJMFF032D21- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFF032D21+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
rJMSF002N12- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN035P06+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
rJMSF019E19- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN009E11+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN036D02+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN010I08+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN018I13+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN006L24+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN014H15+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN016G22+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN007O07+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN033L16+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN036B15+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN015P02+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN011K09+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN017P09+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN036L20+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
rJMSF034P04- GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMSF034P04+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFF013D10+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN038C14+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
JMFN019N23+ GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
____________________________________________________________
consensus GGATGATGGGCAGCAAGAGTGCCAGCCCACGGTTGTCTCCATCGGCAGCTATCTCCGCTA
. : . : . : . : . : . :
rJMFF050I13- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCC
JMFN025C23+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN016N11+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
rJMFF013D10- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN008B10+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
rJMFF032D21- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFF032D21+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
rJMSF002N12- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN035P06+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
rJMSF019E19- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN009E11+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN036D02+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN010I08+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN018I13+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN006L24+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN014H15+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN016G22+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN007O07+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN033L16+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN036B15+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN015P02+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN011K09+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN017P09+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN036L20+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMSF019E19+ CGGAGAAGATCGCCCCAGCCA
rJMSF034P04- TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMSF034P04+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFF013D10+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN038C14+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
JMFN019N23+ TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
____________________________________________________________
consensus TCTGCTGGGCGGCGAAAGCCGGCTCAGACACACTCAGGGCGGAGAAGATCGCCCCAGCCA
. : . : . : . : . : . :
JMFN025C23+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN016N11+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
rJMFF013D10- GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN008B10+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
rJMFF032D21- GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFF032D21+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
rJMSF002N12- GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN035P06+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
rJMSF019E19- GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN009E11+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN036D02+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN010I08+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN018I13+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN006L24+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN014H15+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN016G22+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN007O07+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN033L16+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN036B15+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN015P02+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN011K09+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN017P09+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN036L20+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMSF019E19+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
rJMSF034P04- GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMSF034P04+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMSF002N12+ GCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFF013D10+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN038C14+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFN019N23+ GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
JMFF050I13+ TGTGTTGCAGGCTGAGAGTC
____________________________________________________________
consensus GGGCTGTTCCGGTGAGGGCAGATGAAACTACAGACTTGTCTGTGTTGCAGGCTGAGAGTC
. : . : . : . : . : . :
JMFN025C23+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN016N11+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
rJMFF013D10- CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN008B10+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
rJMFF032D21- CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFF032D21+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
rJMSF002N12- CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN035P06+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
rJMSF019E19- CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN009E11+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN036D02+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGACGCGCTTTTGGCTTGACAGGGTT
JMFN010I08+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN018I13+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN006L24+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN014H15+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN016G22+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN007O07+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN033L16+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN036B15+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN015P02+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN011K09+ CCTTGGGAAGGTTTTTCAATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN017P09+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN036L20+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGAT--CCCCTTGGCTTGACAGGGTT
JMSF019E19+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
rJMSF034P04- CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMSF034P04+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMSF002N12+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFF013D10+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN038C14+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFN019N23+ CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
JMFF050I13+ CCTGGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
____________________________________________________________
consensus CCTTGGGAAGGTTTTTC-ATGGAGAGAAGTGAGATGATG-GGTTTTGGCTTGACAGGGTT
. : . : . : . : . : . :
JMFN025C23+ AATGGACGCTTTGGGTGTGGTTAAGCTCT
JMFN016N11+ AATGGACGCTTTG
rJMFF013D10- AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAG
JMFN008B10+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATG
rJMFF032D21- AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFF032D21+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
rJMSF002N12- AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN035P06+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
rJMSF019E19- AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN009E11+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN036D02+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN010I08+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN018I13+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN006L24+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN014H15+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN016G22+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN007O07+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN033L16+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN036B15+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN015P02+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN011K09+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN017P09+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN036L20+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMSF019E19+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
rJMSF034P04- AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMSF034P04+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMSF002N12+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFF013D10+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN038C14+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFN019N23+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
JMFF050I13+ AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
____________________________________________________________
consensus AATGGACGCTTTGGGTGTGGTTAAGCTCTTGGCATTAAGCATGGCGGTTGTAGCTATGGT
. : . : . : . : . : . :
rJMFF032D21- GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAAAGAAT
JMFF032D21+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAAT
rJMSF002N12- GGCAGCCATTTTTGCACAAGAAACCGGTGGGGAAGCTGAAAGAATGCACTGAAGTGAATA
JMFN035P06+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGA
rJMSF019E19- GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACT
JMFN009E11+ GGCAGCCATTTTTGCACAAGAAACCGG
JMFN036D02+ GGCAGCCATTTT
JMFN010I08+ GGCAGCCATTTTTG
JMFN018I13+ GGCAG
JMFN006L24+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCT
JMFN014H15+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMFN016G22+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTG
JMFN007O07+ GGCAGCCATTTTTGGACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAA
JMFN033L16+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAA
JMFN036B15+ GGCAGCCATTTTTGCACAAGAAACCGGT
JMFN015P02+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGA
JMFN011K09+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGA
JMFN017P09+ GGCAGCCATTTTTGCACAAG
JMFN036L20+ GGCAGCCATTTTTGCACAAGAAACCG
JMSF019E19+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACT
rJMSF034P04- GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAAANAATGCACTGAAGTGAATA
JMSF034P04+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMSF002N12+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMFF013D10+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMFN038C14+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMFN019N23+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
JMFF050I13+ GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
____________________________________________________________
consensus GGCAGCCATTTTTGCACAAGAAACCGGT-GGGAAGCTGAGAGAATGCACTGAAGTGAATA
. : . : . : . : . : . :
rJMSF002N12- CCACACCCTGTAAT
JMFN014H15+ CCACACCCTG
rJMSF034P04- CCACACCCTGTAATGG
JMSF034P04+ CCACACCCTGTAATGGTGTTTT
JMSF002N12+ CCACACCCTGTAATGGTGTTTT
JMFF013D10+ CCACACCCTGTAATGGTGTTTT
JMFN038C14+ CCACACCCTGTAATGGTGTTTTG
JMFN019N23+ CCACACCCTGTAATGGTGTTTTGG
JMFF050I13+ CCACACCCTGTAATGGTGTTTTTAGAGTTTTTTTTTTTTTTTTCAAATGCAACTATCCAC
____________________________________________________________
consensus CCACACCCTGTAATGGTGTTTTGGGAGTTTTTTTTTTTTTTTTCAAATGCAACTATCCAC
. : . : . : . : . : . :
JMFF050I13+ TTACCAAAAATAAATTTTAAAAAACCCCAAAAGATATTGTTTTGCCATGAACAGGCAACA
____________________________________________________________
consensus TTACCAAAAATAAATTTTAAAAAACCCCAAAAGATATTGTTTTGCCATGAACAGGCAACA
. : . : . : . : . : . :
JMFF050I13+ ATGTCTACAATTGTTCCATCTAGACTGAAACAAACAAGCCCCATTACTCTTTTATCAG-T
rJMSF036N13- GTCTACAATTGTTCCATTTAGACTGAAACAAACAAGCCCCATTACTCTTTTATCAG-T
rJMSF029N07- GTCTACNATTGTTCCATTTAGACTGAAACAAACAAGCCCCATTACTCTTTTATCAG-T
rJMSF042K17- TAGACTGAAACAAACAAGCCCCATTACTCTTTTATCAGCT
rJMSF015D21- TTACTCTTTTATCAG-T
____________________________________________________________
consensus ATGTCTACAATTGTTCCATTTAGACTGAAACAAACAAGCCCCATTACTCTTTTATCAG-T
. : . : . : . : . : . :
JMFF050I13+ CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
rJMSF036N13- CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
rJMSF029N07- CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
rJMSF042K17- CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
rJMSF015D21- CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
____________________________________________________________
consensus CCTCACAAACCACTAGGTTGGTATTCACATTTCTTACATCTATCACCCTGTGCATTCTGA
. : . : . : . : . : . :
JMFF050I13+ TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
rJMSF036N13- TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
rJMSF029N07- TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
rJMSF042K17- TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
rJMSF015D21- TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
____________________________________________________________
consensus TTTGCTCCTAAATTCTTTATGAGCAAGAAAAAAACGAAATCGGAAACAAACTTCTACTAG
. : . : . : . : . : . :
JMFF050I13+ TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
rJMSF036N13- TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
rJMSF029N07- TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
rJMSF042K17- TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
rJMSF015D21- TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
____________________________________________________________
consensus TACATATTATTCAGAGACCCTTTCCCGGATAAATCGAGGAACTATATATCACCCTTCGGA
. : . : . : . : . : . :
JMFF050I13+ TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
rJMSF036N13- TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
rJMSF029N07- TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
rJMSF042K17- TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
rJMSF015D21- TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
____________________________________________________________
consensus TTTTAGCTCTGATTCTAAGCTAACTATTGTCACTTCACCCTCGTCAGACAACAAAGGAAG
. : . : . : . : . : . :
JMFF050I13+ CTTACAATTGC
rJMSF036N13- CTTACACTTGCTACTCATCTTCTTCACTTTCTCGCTTGAGCATATGAAGATCCGCCTCAC
rJMSF029N07- CTTACACTTGCTACTCATCTTCTTCACTTTCTCGCTTGAGCATATGAAGATCCGCCTCAC
rJMSF042K17- CTTACACTTGCTACTCATCTTCTTCACTTTCTCGCTTGAGCATATGAAGATCCGCCTCAC
rJMSF015D21- CTTACACTTGCTACTCATCTTCTTCACTTTCTCGCTTGAGCATATGAAGATCCGCCTCAC
____________________________________________________________
consensus CTTACACTTGCTACTCATCTTCTTCACTTTCTCGCTTGAGCATATGAAGATCCGCCTCAC
. : . : . : . : . : . :
rJMSF036N13- CATTTTGCAGAACTCCGGCCATGGGTCATCGCCTACGAGCATCATATCTCCCTCGTCATC
rJMSF029N07- CATTTTGCAGAACTCCGGCCATGGGTCATCGCCTACGAGCATCATATCTCCCTCGTCATC
rJMSF042K17- CATTTTGCAGAACTCCGGCCATGGGTCATCGCCTACGAGCATCATATCTCCCTCGTCATC
rJMSF015D21- CATTTTGCAGAACTCCGGCCATGGGTCATCGCCTACGAGCATCATATCTCCCTCGTCATC
____________________________________________________________
consensus CATTTTGCAGAACTCCGGCCATGGGTCATCGCCTACGAGCATCATATCTCCCTCGTCATC
. : . : . : . : . : . :
rJMSF036N13- CGCGTATATGACCTCCCACTTGCTTCGAGGGCAAAGTTCGCCTTTAAGTTCAAAGATTTC
rJMSF029N07- CGCGTATATGACCTCCCACTTGCTTCGAGGGCAAAGTTCGCCTTTAAGTTCAAAGATTTC
rJMSF042K17- CGCGTATATGACCTCCCACTTGCTTCGAGGGCAAAGTTCGCCTTTAAGTTCAAAGATTTC
rJMSF015D21- CGCGTATATGACCTCCCACTTGCTTCGAGGGCAAAGTTCGCCTTTAAGTTCAAAGATTTC
____________________________________________________________
consensus CGCGTATATGACCTCCCACTTGCTTCGAGGGCAAAGTTCGCCTTTAAGTTCAAAGATTTC
. : . : . : . : . : . :
rJMSF036N13- CTCGAGCTCGTTTAAGAGGTCATCGTAGTCCTTCATTGTTGTCAAATCAACCGCTCGTCC
rJMSF029N07- CTCGAGCTCGTTTAAGAGGTCATCGTAGTCCTTCATTGTTGTCAAATCAACCGCTCGTCC
rJMSF042K17- CTCGAGCTCGTTTAAGAGGTCATCGTAGTCCTTCATTGTTGTCAAATCAACCGCTCGTCC
rJMSF015D21- CTCGAGCTCGTTTAAGAGGTCATCGTAGTCCTTCATTGTTGTCAAATCAACCGCTCGTCC
____________________________________________________________
consensus CTCGAGCTCGTTTAAGAGGTCATCGTAGTCCTTCATTGTTGTCAAATCAACCGCTCGTCC
. : . : . : . : . : . :
rJMSF036N13- AAAACGAGAG-------------CCTTAGTGCAAGTTCTCGAAGTAGTAACGGATGGTTT
rJMSF029N07- AAAACGAGAGCCTTCCATTTGCACCTTAGTGCAAGTTCTCGAAGTAGTAACGGATGGTTT
rJMSF042K17- AAAACGAGAGCCTTCCATTTGCACCTTAGTGCAAGTTCTCGAAGTAGTAACGGATGGTTT
rJMSF015D21- AAAACGAGAGCCTTCCATTTGCACCTTAGTGCAAGTTCTCGAAGTAGTAACGGATGGTTT
____________________________________________________________
consensus AAAACGAGAGCCTTCCATTTGCACCTTAGTGCAAGTTCTCGAAGTAGTAACGGATGGTTT
. : . : . : . : . : . :
rJMSF036N13- GCTTAGCGTATCCTTAAGCGATGCCTCCACTAGTTTTATTTCTCGTGAGGACTTAAGATG
rJMSF029N07- GCTTAGCGTATCCTTAAGCGATGCCTCCACTAGTTTTATTTCTCGTGAGGACTTAAGATG
rJMSF042K17- GCTTAGCGTATCCTTAAGCGATGCCTCCACTAGTTTTATTTCTCGTGAGGACTTAAGATG
rJMSF015D21- GCTTAGCGTATCCTTAAGCGATGCCTCCACTAGTTTTATTTCTCGTGAGGACTTAAGATG
____________________________________________________________
consensus GCTTAGCGTATCCTTAAGCGATGCCTCCACTAGTTTTATTTCTCGTGAGGACTTAAGATG
. : . : . : . : . : . :
rJMSF036N13- CTCTGATTTCTGAACTGCACCAACTCCATTTGCATCACAAACAGCGTTGGCATTACTTGG
rJMSF029N07- CTCTGATTTCTGAACTGCACCAACTCCATTTGCATCACAAACAGCGTTGGCATTACTTGG
rJMSF042K17- CTCTGATTTCTGAACTGCACCAACTCCATTTGCATCACAAACAGCGTTGGCATTACTTGG
rJMSF015D21- CTCTGATTTCTGAACTGCACCAACTCCATTTGCATCACAAACAGCGTTGGCATTACTTGG
____________________________________________________________
consensus CTCTGATTTCTGAACTGCACCAACTCCATTTGCATCACAAACAGCGTTGGCATTACTTGG
. : . : . : . : . : . :
rJMSF036N13- CATGGTATTTGAACAGGGC
rJMSF029N07- CATGGTATTTGAACAGGGC
rJMSF042K17- CATGGTATTTGAACAGGGCGTTTCTTTCTCCCGACGATAATTATCAGCGTTGCTAAA
rJMSF015D21- CATGGTATTTGAACAGGGCGTTTCTTTCTCCCGACGATAATTATCAGCGTTGCTAAACTC
____________________________________________________________
consensus CATGGTATTTGAACAGGGCGTTTCTTTCTCCCGACGATAATTATCAGCGTTGCTAAACTC