Contig 009927:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014A09Sequence240009927 (3)ref|XP_011074450.1|2e-26PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105159179 [Sesamum i646009927 (3)ref|XP_009612643.1|139PREDICTED: uncharacterized protein LOC104105915 [Nicotiana tomentosiformis]
JMSF020A09Sequence149009927 (3)ref|XP_009612643.1|77.4PREDICTED: uncharacterized protein LOC104105915 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF014A09-                        ACAAAAGTGATGAAGCAATACAATGCAGCTGCAGACAGAAAATGGA
                      ____________________________________________________________
consensus                           ACAAAAGTGATGAAGCAATACAATGCAGCTGCAGACAGAAAATGGA
 
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rJMSF014A09-          ATGCAAAATTCTCCTGAGGCTTATACAACATCAGATCTTCACTTTGTGATGATATATGCA
                      ____________________________________________________________
consensus             ATGCAAAATTCTCCTGAGGCTTATACAACATCAGATCTTCACTTTGTGATGATATATGCA
 
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rJMSF014A09-          GATTCACCCGAGGATCCTGCTTCTCTTCCGTTAGAAGTTCCCAGATTATACGCTCATCAC
                      ____________________________________________________________
consensus             GATTCACCCGAGGATCCTGCTTCTCTTCCGTTAGAAGTTCCCAGATTATACGCTCATCAC
 
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rJMSF014A09-          TCCCGACATCCATGGAACGATCAATGGAGCATTTGGATGGGCGTTCCTATAAGCTTCTGA
                      ____________________________________________________________
consensus             TCCCGACATCCATGGAACGATCAATGGAGCATTTGGATGGGCGTTCCTATAAGCTTCTGA
 
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rJMSF014A09-          ATACTGGTGCTGGAAGTTCAATTTGGGTTTCTCGGAGTATTTCAACCAGCATTCCTGATG
                      ____________________________________________________________
consensus             ATACTGGTGCTGGAAGTTCAATTTGGGTTTCTCGGAGTATTTCAACCAGCATTCCTGATG
 
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rJMSF014A09-          TTTGTGTTGATAAATATCGGGGGAGTAGCATCCTTTTTCCGCTGGGCAGTAAACCCATAT
                      ____________________________________________________________
consensus             TTTGTGTTGATAAATATCGGGGGAGTAGCATCCTTTTTCCGCTGGGCAGTAAACCCATAT
 
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rJMSF014A09-          GTTGCATTTCTTGTCGCCCGATTTCGCACGCTTCGCCTGTCCACAAAAGCCCTACAACAC
                      ____________________________________________________________
consensus             GTTGCATTTCTTGTCGCCCGATTTCGCACGCTTCGCCTGTCCACAAAAGCCCTACAACAC
 
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JMSF014A09+             GTATGCAGATTCTTTATGGTGGGTAAGACCCCATCTCACAGCAGCGCCATCATAATCG
JMSF020A09+             GTATGCAGATTCTNTATGGTGGGTAAGACCCCATCTCACAGCAGCGCCATCATAATCG
rJMSF014A09-          TCGTATGCAGATTCTTTATGGTGGGTAAGACCCCATCTCACAGCAGCGCCATCATAATCG
                      ____________________________________________________________
consensus             TCGTATGCAGATTCTTTATGGTGGGTAAGACCCCATCTCACAGCAGCGCCATCATAATCG
 
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JMSF014A09+           GTATGAAGTTCAGCGTTGCATTCAGGGGGAAGCCGTTTCCCCGCTATAATTTCAGGTTCT
JMSF020A09+           GTATGAAGTTCAGCGTNGCATTCAGGGGGAAGCCGTTTCCCCGCTATAATTTCAGGTTAT
rJMSF014A09-          GTATGAAGTTCAGCGTTGCATTCAGGGGGAAGCCGTTTCCCCGCTATAATTTCAGGTTCT
                      ____________________________________________________________
consensus             GTATGAAGTTCAGCGTTGCATTCAGGGGGAAGCCGTTTCCCCGCTATAATTTCAGGTTCT
 
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JMSF014A09+           AATTCCGCTCCTTCAGGCTTGTCATCGTGTTCCCTATTAATAACATCAGCAGGGATCCAG
JMSF020A09+           AATTCCGCTCCTTCAGGCTNGTCATCG                                 
rJMSF014A09-          AATTCCGCTCCTTCAGGCTTGTCATCGTGTTCCCTATTAATAACATCAGCAGGGATCCAG
                      ____________________________________________________________
consensus             AATTCCGCTCCTTCAGGCTTGTCATCGTGTTCCCTATTAATAACATCAGCAGGGATCCAG
 
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JMSF014A09+           AGACCGATTTCCTCTAATACCTCAACCCAATCGACATCCAAAACTCTTGCAAGCATTTCC
rJMSF014A09-          AGACCGATTTCCTCTAATACCTCAACCCAATCGACATCCAAAACTCTTGCAAGCATTTCC
                      ____________________________________________________________
consensus             AGACCGATTTCCTCTAATACCTCAACCCAATCGACATCCAAAACTCTTGCAAGCATTTCC