Contig 009924:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013H21Sequence448009924 (4)ref|XP_009587048.1|2e-54PREDICTED: B-cell receptor-associated protein 31 [Nicotiana tomentosiformis]707009924 (4)ref|XP_009587048.1|6e-93PREDICTED: B-cell receptor-associated protein 31 [Nicotiana tomentosiformis]
JMSF037B09Sequence581009924 (4)ref|XP_009587048.1|6e-81PREDICTED: B-cell receptor-associated protein 31 [Nicotiana tomentosiformis]699009924 (4)ref|XP_009587048.1|3e-97PREDICTED: B-cell receptor-associated protein 31 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF013H21-                                           GGAGCTCTCAACACTTCTCCACTCCTTC
JMSF037B09-                                           GGAGCTCTCAACACTTCTCCACTCCTTC
                      ____________________________________________________________
consensus                                             GGAGCTCTCAACACTTCTCCACTCCTTC
 
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JMSF013H21-           AATCACGCACTCCCTGCTATCCTCAAATCTCAGCCGTTCAATAATTGCAGTTGCGAAGCA
JMSF037B09-           AATCACGCACTCCCTGCTATCCTCAAATCTCAGCCGTTCAATAATTGCAGTTGCGAAGCA
                      ____________________________________________________________
consensus             AATCACGCACTCCCTGCTATCCTCAAATCTCAGCCGTTCAATAATTGCAGTTGCGAAGCA
 
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JMSF013H21-           TCATGATTCAGCTGCTCTTCCCTCTAATATTCGCCGAGATGGCACTGATCGGAATTTTCG
JMSF037B09-           TCATGATTCAGCTGCTCTTCCCTCTAATATTCGCCGAGATGGCACTGATCGGAATTTTCG
rJMSF037B09+                                                                     G
                      ____________________________________________________________
consensus             TCATGATTCAGCTGCTCTTCCCTCTAATATTCGCCGAGATGGCACTGATCGGAATTTTCG
 
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JMSF013H21-           TCTTCAGAACTCCGCTTCGCAAGCTGGTGATATTGGGCCTTGACAGAGTCAAACGCGGCC
JMSF037B09-           TCTTCAGAACTCCGCTTCGCAAGCTGGTGATATTGGGCCTTGACAGAGTCAAACGCGGCC
rJMSF037B09+          TCTTCAGAACTCCGCTTCGCAAGCTGGTGATATTGGGCCTTGACAGAGTCAAACGCGGCC
rJMSF013H21+                       GCTTCGCAAGCTGGTGATATTGGGCCTTGACAGAGTCAAACGCGGCC
                      ____________________________________________________________
consensus             TCTTCAGAACTCCGCTTCGCAAGCTGGTGATATTGGGCCTTGACAGAGTCAAACGCGGCC
 
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JMSF013H21-           GCGGCTCCATCGTCGTTAAGACCGTCGCCGGAACCGTCTTCGTCGTCATGCTCTCCACCA
JMSF037B09-           GCGGCTCCATCGTCGTTAAGACCGTCGCCGGAACCGTCTTCGTCGTCATGCTCTCCACCA
rJMSF037B09+          GCGGCTCCATCGTCGTTAAGACCGTCGCCGGAACCGTCTTCGTCGTCATGCTCTCCACCA
rJMSF013H21+          GCGGCTCCATCGTCGTTAAGACCGTCGCCGGAACCGTCTTCGTCGTCATGCTCTCCACCA
                      ____________________________________________________________
consensus             GCGGCTCCATCGTCGTTAAGACCGTCGCCGGAACCGTCTTCGTCGTCATGCTCTCCACCA
 
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JMSF013H21-           TCTACAATGTGATTTCGCTTCGCAACCGGTGGATCGAGGACGAAGGCGGCGATATAACCC
JMSF037B09-           TCTACAATGTGATTTCGCTTCGCAACCGGTGGATCGAGGACGAAGGCGGCGATATAACCC
rJMSF037B09+          TCTACAATGTGATTTCGCTTCGCAACCGGTGGATCGAGGACGAAGGCGGCGATATAACCC
rJMSF013H21+          TCTACAATGTGATTTCGCTTCGCAACCGGTGGATCGAGGACGAAGGCGGCGATATAACCC
                      ____________________________________________________________
consensus             TCTACAATGTGATTTCGCTTCGCAACCGGTGGATCGAGGACGAAGGCGGCGATATAACCC
 
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JMSF013H21-           CCACCGATCAGATTCTATTGGCTCAACATCTTCTCGAAGCTTCTCTCATGGGATTCTCGC
JMSF037B09-           CCACCGATCAGATTCTATTGGCTCAACATCTTCTCGAAGCTTCTCTCATGGGATTCTCGC
rJMSF037B09+          CCACCGATCAGATTCTATTGGCTCAACATCTTCTCGAAGCTTCTCTCATGGGATTCTCGC
rJMSF013H21+          CCACCGATCAGATTCTATTGGCTCAACATCTTCTCGAAGCTTCTCTCATGGGATTCTCGC
                      ____________________________________________________________
consensus             CCACCGATCAGATTCTATTGGCTCAACATCTTCTCGAAGCTTCTCTCATGGGATTCTCGC
 
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JMSF013H21-           TCTTCCTTGGACTAATGATTGATAGGCTTCACCATTACATCAGAGAGCTTCGCATGAGAA
JMSF037B09-           TCTTCCTTGGACTAATGATTGATAGGCTTCACCATTACATCAGAGAGCTTCGCATGAGAA
rJMSF037B09+          TCTTCCTTGGACTAATGATTGATAGGCTTCACCATTACATCAGAGAGCTTCGCATGAGAA
rJMSF013H21+          TCTTCCTTGGACTAATGATTGATAGGCTTCACCATTACATCAGAGAGCTTCGCATGAGAA
                      ____________________________________________________________
consensus             TCTTCCTTGGACTAATGATTGATAGGCTTCACCATTACATCAGAGAGCTTCGCATGAGAA
 
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JMSF037B09-           GGAAGACGATGGAAGCAGTGAAAAAGCAAAACCGGGCCATTGACGAAGGGAAGGCTGGAA
rJMSF037B09+          GGAAGACGATGGAAGCAGTGAAAAAGCAAAACCGGGCCATTGACGAAGGGAAGGCTGGAA
rJMSF013H21+          GGAAGACGATGGAAGCAGTGAAAAAGCAAAACCGGGCCATTGACGAAGGGAAGGCTGGAA
                      ____________________________________________________________
consensus             GGAAGACGATGGAAGCAGTGAAAAAGCAAAACCGGGCCATTGACGAAGGGAAGGCTGGAA
 
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JMSF037B09-           TCTCGGAGGAGATCAAATCCCTCGAGGAACAGGCGAGTTCATTGCGTGAGAGGATTAAAC
rJMSF037B09+          TCTCGGAGGAGATCAAATCCCTCGAGGAACAGGCGAGTTCATTGCGTGAGAGGATTAAAC
rJMSF013H21+          TCTCGGAGGAGATCAAATCCCTCGAGGAACAGGCGAGTTCATTGCGTGAGAGGATTAAGC
                      ____________________________________________________________
consensus             TCTCGGAGGAGATCAAATCCCTCGAGGAACAGGCGAGTTCATTGCGTGAGAGGATTAAAC
 
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JMSF037B09-           AGCTGGAGTCAGA                                               
rJMSF037B09+          AGCTGGAGTCAGAGGTGGAGGAGAAGAGCAAGGAAGCGAGCAGCTCTGAAGCCAACGCGA
rJMSF013H21+          AGCTGGAGTCAGAGGTGGAGGAGAAGAGTAAGGAAGCGAGCAGCTCTGAAGCCAACGCGA
                      ____________________________________________________________
consensus             AGCTGGAGTCAGAGGTGGAGGAGAAGAGTAAGGAAGCGAGCAGCTCTGAAGCCAACGCGA
 
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rJMSF037B09+          TCGCCCTGAAAAAGCAATCGGAAGGATTTCTCCTTGAATATGACCGGTTACTGGAAGAAA
rJMSF013H21+          TCGCCCTGAAAAAGCAATCGGAAGGATTTCTCCTTGAATATGACCGGTTACTGGAAGAAA
                      ____________________________________________________________
consensus             TCGCCCTGAAAAAGCAATCGGAAGGATTTCTCCTTGAATATGACCGGTTACTGGAAGAAA
 
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rJMSF037B09+          ATCAACACCTGAGAAGTCAGTTACAGTCACTGGATAGAAAGTTGTCACATTCAGATAGCA
rJMSF013H21+          ATCAACACCTGAGAAGTCAGTTACAGTCACTGGATAGAAAGTTGTCACATTCAGATAGCA
                      ____________________________________________________________
consensus             ATCAACACCTGAGAAGTCAGTTACAGTCACTGGATAGAAAGTTGTCACATTCAGATAGCA
 
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rJMSF037B09+          AGAAGGTTTCCTAAGGATTAAGTAACCAACCATGCCTGTTGGTGTCCAGATTTTACCCCT
rJMSF013H21+          AGAAGGTTTCCTAAGGATTAAGTAACCAACCATGCCTGTTGGTGTCCAGATTTTACCCCT
                      ____________________________________________________________
consensus             AGAAGGTTTCCTAAGGATTAAGTAACCAACCATGCCTGTTGGTGTCCAGATTTTACCCCT
 
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rJMSF037B09+          CAGAGATGAGGTTTGTGACAAAGTCGCTGTTCAAATGT                      
rJMSF013H21+          CAGAGATGAGGTTTGTGACAAAGTCGCTGTTCAAATGTTATGTCATTTGCACATTCGTTT
                      ____________________________________________________________
consensus             CAGAGATGAGGTTTGTGACAAAGTCGCTGTTCAAATGTTATGTCATTTGCACATTCGTTT