| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF013G04 | Sequence | 245 | 023157 | 744 | 009923 (4) | ref|XP_009802768.1| | 4e-29 | PREDICTED: putative uncharacterized protein YDL057W [Nicotiana sylvestris] | |||
| JMSF017I12 | Sequence | 512 | 000498 (5) | ref|XP_011019441.1| | 218 | PREDICTED: uncharacterized protein LOC105122188 [Populus euphratica] | 827 | 009923 (4) | ref|XP_009802768.1| | 8e-29 | PREDICTED: putative uncharacterized protein YDL057W [Nicotiana sylvestris] |
| JMSF018D24 | Sequence | 219 | 000498 (5) | ref|XP_010047560.1| | 59.3 | PREDICTED: uncharacterized protein LOC104436476 [Eucalyptus grandis] gb|KCW79504 | 765 | 009923 (4) | ref|XP_009802768.1| | 2e-21 | PREDICTED: putative uncharacterized protein YDL057W [Nicotiana sylvestris] |
| JMSF045G02 | Sequence | 737 | 000498 (5) | ref|XP_009596424.1| | 2e-103 | PREDICTED: putative uncharacterized protein YDL057W [Nicotiana tomentosiformis] | 828 | 009923 (4) | ref|XP_009802768.1| | 8e-29 | PREDICTED: putative uncharacterized protein YDL057W [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF018D24+ CNAGCCCGTTTGACGAAGAGCAGCAAGCTGTTCAAA
____________________________________________________________
consensus CNAGCCCGTTTGACGAAGAGCAGCAAGCTGTTCAAA
. : . : . : . : . : . :
rJMSF018D24+ CGGTGGCCCAGGAAATTCTTCACCAAATTCTTCCAAAAGGTCGTGTGAATTGAGTCCAAG
____________________________________________________________
consensus CGGTGGCCCAGGAAATTCTTCACCAAATTCTTCCAAAAGGTCGTGTGAATTGAGTCCAAG
. : . : . : . : . : . :
rJMSF018D24+ TAAGAGTCGGTTGTTGTTGTTGTAGCCATCGGAGCCAATGTAGAGCTGCCCCCTCCATAC
____________________________________________________________
consensus TAAGAGTCGGTTGTTGTTGTTGTAGCCATCGGAGCCAATGTAGAGCTGCCCCCTCCATAC
. : . : . : . : . : . :
rJMSF018D24+ TAACGAATGCTGTTGGGACCTTCAAATCCTCTCGGGTGTGATGAATGGCAAAGTACTACT
rJMSF045G02+ TGTGATGAATGGCAAAGTACTACT
rJMSF017I12+ TGTGATGAATGGCNAAGTACTACT
____________________________________________________________
consensus TAACGAATGCTGTTGGGACCTTCAAATCCTCTCGGGTGTGATGAATGGCAAAGTACTACT
. : . : . : . : . : . :
rJMSF018D24+ CCACTCTAGCCAGCCACCCAATCAGATCTGTGCCTTCAAATGTAGGAAGTTCTGTTTTTC
rJMSF045G02+ CCACTCTAGCCAGCCACCCCATCAGATCTGTGCCTTCAAATGTAGGAAGTTCTGTTTTTC
rJMSF017I12+ CCACTCTAGCCAGCCACCCAATCAGATCTGTGCCTTC-AATGTAGGAAGTTCTGTTTTTC
____________________________________________________________
consensus CCACTCTAGCCAGCCACCCAATCAGATCTGTGCCTTCAAATGTAGGAAGTTCTGTTTTTC
. : . : . : . : . : . :
rJMSF018D24+ CAATGGGCAACGAGGTGTTGTCCGGCTGAACATGTTCTGGAAGAGAGGTTGAATTCGGCA
rJMSF045G02+ CAATGGGCAACGAGGTGTTGTCCGGCTGAACATGTTCTGGAAGAGAGGTTGAATTCGGCA
rJMSF017I12+ CAATGGGCAACGAGGTGTTGTCCGGCTGAACATGTTCTGGAAGAGAGGTTGAATTCGGCA
____________________________________________________________
consensus CAATGGGCAACGAGGTGTTGTCCGGCTGAACATGTTCTGGAAGAGAGGTTGAATTCGGCA
. : . : . : . : . : . :
rJMSF018D24+ TTGGATGGAAGTTGATGAAGCACTGGCATTGTTGTGCCCTCCGCCTTGGAAGGAGAGAGC
rJMSF045G02+ TTGGATGGAAGTTGATGAAGCACTGGCATTGTTGTGCCCTCCGCCTTGGAAGGAGAGAGC
rJMSF017I12+ TTGGATGGAAGTTGATGAAGCACTGGCATTGTTGTGCCCTCCGCCTTGGAAGGAGAGAGC
rJMSF013G04+ CCCTCCGCCTTGGAAGGAGAGAGC
____________________________________________________________
consensus TTGGATGGAAGTTGATGAAGCACTGGCATTGTTGTGCCCTCCGCCTTGGAAGGAGAGAGC
. : . : . : . : . : . :
rJMSF018D24+ GAGGAGATCAGACATCCTAGCCATGGAAGCTTCCATGGCTGCAAATCGATCATTCAATGT
rJMSF045G02+ GAGGAGATCAGACATCCTAGCCATGGAAGCTTCCATGGCTGCAAATCGATCATTCAATGT
rJMSF017I12+ GAGGAGATCAGACATCCTAGCCATGGAAGCTTCCATGGCTGCAAATCGATCATTCAATGT
rJMSF013G04+ GAGGAGATCAGACATCCTAGCCATGGAAGCTTCCATGGCTGCAAATCGATCATTCAATGT
____________________________________________________________
consensus GAGGAGATCAGACATCCTAGCCATGGAAGCTTCCATGGCTGCAAATCGATCATTCAATGT
. : . : . : . : . : . :
rJMSF018D24+ GGCCAATTCAGCACGGATTGCATCTTGGTTCTTCTCTAACGTCTCTACTTGGGAATCTCG
rJMSF045G02+ GGCCAATTCAGCACGGATTGCATCTTGGTTCTTCTCTAACGTCTCTACTTGGGAATCTCG
rJMSF017I12+ GGCCAATTCAGCACGGATTGCATCTTGGTTCTTCTCTAACGTCTCTACTTGGGAATCTCG
rJMSF013G04+ GGCCAATTCAGCACGGATTGCATCTTGGTTCTTCTCTAACGTCTCTACTTGGGAATCTCG
____________________________________________________________
consensus GGCCAATTCAGCACGGATTGCATCTTGGTTCTTCTCTAACGTCTCTACTTGGGAATCTCG
. : . : . : . : . : . :
rJMSF018D24+ TTTGTTCGTCATTCAACGGCAGGTCGGACCAATTTGTTAGAGAAAAGAACAAGGAGGGTG
rJMSF045G02+ TTTGTTCGTCATTCAACGGCAGGTCGGACCAATTTGTTAGAGAAAAGAACAAGGAGGGTG
rJMSF017I12+ TTTGTTCGTCATTCAACGGCAGGTCGGACCAATTTGTTAGAGAAAAGAACAAGGAGGGTG
rJMSF013G04+ TTTGTTCGTCATTCAACGGCAGGTCGGACCAATTTGTTAGAGAAAAGAACAAGGAGGGTG
____________________________________________________________
consensus TTTGTTCGTCATTCAACGGCAGGTCGGACCAATTTGTTAGAGAAAAGAACAAGGAGGGTG
. : . : . : . : . : . :
rJMSF018D24+ TTGACGATCCATGGTTCAAGGGATGAAATGGTGCCTGTTGATGATGCCCTGGAATTCGCC
rJMSF045G02+ TTGACGATCCATGGTTCAAGGGATGAAATGGTGCCTGTTGATGATGCCCTGGAATTCGCC
rJMSF017I12+ TTGACGATCCATGGTTCAAGGGATGAAATGGTGCCTGTTGATGATGCCCTGGAATTCGCC
rJMSF013G04+ TTGACGATCCATGGTTCAAGGGATGAAATGGTGCCTGTTGATGATGCCCTGGAATTCGCC
____________________________________________________________
consensus TTGACGATCCATGGTTCAAGGGATGAAATGGTGCCTGTTGATGATGCCCTGGAATTCGCC
. : . : . : . : . : . :
rJMSF018D24+ AAGTACATCCCAACCCACACACTGCACATTATCGAGGGAGCAGATCATGAATTTACCTTG
rJMSF045G02+ AAGTACATCCCAACCCACACACTGCACATTATCGAGGGAGCAGATCATGAATTTACCTTG
rJMSF017I12+ AAGTACATCCCAACCCACACACTGCACATTATCGAGGGAGCAGATCATGAATTTACCTTG
rJMSF013G04+ AAGTACATCCCAACCCACACACTGCACATTATCGAGGGAGCAGATCATGAATTTACCTTG
____________________________________________________________
consensus AAGTACATCCCAACCCACACACTGCACATTATCGAGGGAGCAGATCATGAATTTACCTTG
. : . : . : . : . : . :
rJMSF018D24+ CACCAAGATGAATTGGCTTCTCTAGTTGTCGCCTTTGTCATGGCTAGTGTATCTAACGAA
rJMSF045G02+ CACCAAGATGAATTGGCTTCTCTAGTTGTCGCCTTTGTCATGGCTAGTGTATCTAACGAA
rJMSF017I12+ CACCAAGATGAATTGGCTTCTCTAGTTGTCGCCTTTGTCATGGCTAGTGTATCTAACGAA
rJMSF013G04+ CACCAAGATGAATTGGCTTCTCTAGTTGTCGCCTTTGTCATGGCTAGTGTATCTAACGAA
____________________________________________________________
consensus CACCAAGATGAATTGGCTTCTCTAGTTGTCGCCTTTGTCATGGCTAGTGTATCTAACGAA
. : . : . : . : . : . :
rJMSF018D24+ GAAATAACC
rJMSF045G02+ GAAATAACCAAACCATCGGAGTCATGCGTAAGAAAACACAAATCAATTCATTCTCGATTC
rJMSF017I12+ GAAATAACCAAACCATCGGAGTCATGCGTAAGAAAACACAAATCAATTCATTCTCGATTC
rJMSF013G04+ GAAATAACCAAACCATCGGAGTCATGCGTAAGAAAACACAAATCAATTCATTCTCGATTC
____________________________________________________________
consensus GAAATAACCAAACCATCGGAGTCATGCGTAAGAAAACACAAATCAATTCATTCTCGATTC
. : . : . : . : . : . :
rJMSF045G02+ TGATTTCGTCTACTTTTGAGCTATGTGCTTTGCCCTTTTCAGCAACATTATATTATGAAG
rJMSF017I12+ TGATTTCGTCTACTTTTGAGCTATGTGCTTTGCCCTTTTCAGCAACATTATATTATGAAG
rJMSF013G04+ TGATTTCGTCTACTTTTGAGCTATGTGCTTTGCCCTTTTCAGCAACATTATATTATGAAG
____________________________________________________________
consensus TGATTTCGTCTACTTTTGAGCTATGTGCTTTGCCCTTTTCAGCAACATTATATTATGAAG
. : . : . : . : . : . :
rJMSF045G02+ CAAATACTTGAGAAATATTCTTGAGAATGAAACTAGGCCTCAATAAATGGCCAAGATATT
rJMSF017I12+ CAAATACTTGAGAAATATTCTTGAGAATGAAACTAGGCCTCAATAAATGGCCAAGATATT
rJMSF013G04+ CAAATACTTGAGAAATATTCTTGAGAATGAAACTAGGCCTCAATAAATGGCCAAGATATT
____________________________________________________________
consensus CAAATACTTGAGAAATATTCTTGAGAATGAAACTAGGCCTCAATAAATGGCCAAGATATT
. : . : . : . : . : . :
rJMSF045G02+ GCTGAAATGTATATTAAATAGTACTAGAAAAGAAGCATGTGGAACTGCCACGGTAAAGAA
rJMSF017I12+ GCTGAAATGTATATTAAATAGTACTAGAAAAGAAGCATGTGGAACTGCCACGGTAAAGAA
rJMSF013G04+ GCTGAAATGTATATTAAATAGTACTAGAAAAGAAGCATGTGGAACTGCCACGGTAAAGAA
____________________________________________________________
consensus GCTGAAATGTATATTAAATAGTACTAGAAAAGAAGCATGTGGAACTGCCACGGTAAAGAA
. : . : . : . : . : . :
rJMSF045G02+ TGTTCTTCCTATTGTGTTTCGT
rJMSF017I12+ TGTTCTTCCTATTGTGTTTCGT
rJMSF013G04+ TGTTCTTCCTATTGTGTTTCGTGTTGGGTTTGGACAAAGAATGAATGTAGGCATTCTTTT
____________________________________________________________
consensus TGTTCTTCCTATTGTGTTTCGTGTTGGGTTTGGACAAAGAATGAATGTAGGCATTCTTTT
. : . : . : . : . : . :
rJMSF013G04+ GTTATACATGAATTCTAGGTGTATGGCAAACTAAGCTACGATGTAAACAGCTAGGAGTTC
____________________________________________________________
consensus GTTATACATGAATTCTAGGTGTATGGCAAACTAAGCTACGATGTAAACAGCTAGGAGTTC