Contig 009922:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF040J12+                      CTCAGCTCCTGAAATACTGGATGGGGAAAATAAGTACAAATGCAGTAG
                      ____________________________________________________________
consensus                         CTCAGCTCCTGAAATACTGGATGGGGAAAATAAGTACAAATGCAGTAG
 
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rJMSF040J12+          ATGTAAGTCTTATCAGAAAGCTGAAAAGAAGTTGACAGTGCATGAAGCTCCTAACATTCT
                      ____________________________________________________________
consensus             ATGTAAGTCTTATCAGAAAGCTGAAAAGAAGTTGACAGTGCATGAAGCTCCTAACATTCT
 
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rJMSF040J12+          TACAGTCATTTTAAAGCGATTTCAGTTGGGAGGCTTGGGAAAGTTGAACAAATCGGTACA
                      ____________________________________________________________
consensus             TACAGTCATTTTAAAGCGATTTCAGTTGGGAGGCTTGGGAAAGTTGAACAAATCGGTACA
 
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rJMSF040J12+          GTTCCCTGAGGTTCTTAACCTTGCTCCATTTATAAGTGGAACTACTGACAAAGATTCTGC
rJMSF013C01+                             CTTGCTCCATTTATAAGTGGAACTACTGACAAAGATTCTGC
                      ____________________________________________________________
consensus             GTTCCCTGAGGTTCTTAACCTTGCTCCATTTATAAGTGGAACTACTGACAAAGATTCTGC
 
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rJMSF040J12+          ATACATTCTGTATGGCGTGGTTGTTCACTTGGATATGATGAATGCAGCTTACAGTGGTCA
rJMSF013C01+          ATACATTCTGTATGGCGTGGTTGTTCACTTGCATATGATGAATGCAGCTTACAGTGGTCA
                      ____________________________________________________________
consensus             ATACATTCTGTATGGCGTGGTTGTTCACTTGGATATGATGAATGCAGCTTACAGTGGTCA
 
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rJMSF040J12+          TTATATAAGTTATGTCAAGGACTTTCAAGGGCAGTGGTTTAGAATTGATGATTGCAGGGT
rJMSF013C01+          TTATATAAGTTATGTCAAGGACTTTCAAGGGCAGTGGTTTAGAATTGATGATTGCAGGGT
                      ____________________________________________________________
consensus             TTATATAAGTTATGTCAAGGACTTTCAAGGGCAGTGGTTTAGAATTGATGATTGCAGGGT
 
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rJMSF040J12+          TGTACCAGTGGAGTCCCAGTCTGTCTTATATGAAAGGCCATACATACTCTTTTATGCAAG
rJMSF013C01+          TGTACCAGTGGAGTCCCAGTCTGTCTTATATGAAAGGCCATACATACTCTTTTATGCAAG
                      ____________________________________________________________
consensus             TGTACCAGTGGAGTCCCAGTCTGTCTTATATGAAAGGCCATACATACTCTTTTATGCAAG
 
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rJMSF040J12+          GCAAACTCCATGCTTGGTGAGGAACTTCAAGATATCCTCTGATTTGGAATCTAAGAGGAG
rJMSF013C01+          GCAAACTCCATGCTTGGTGAGGAACTTCAAGATATCCTCTGATTTGGAATCTAAGAGGAG
                      ____________________________________________________________
consensus             GCAAACTCCATGCTTGGTGAGGAACTTCAAGATATCCTCTGATTTGGAATCTAAGAGGAG
 
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rJMSF040J12+          TTCAGAAGCTATTTCTTCTGGTAATATCAAAAAGAAAAAAAAGTCGAAATTGAGTACAAG
rJMSF013C01+          TTCAGAAGCTATTTCTTCTGGTAATATCAAAAAGAAAAAAAAGTCGAAATTGAGTACAAG
                      ____________________________________________________________
consensus             TTCAGAAGCTATTTCTTCTGGTAATATCAAAAAGAAAAAAAAGTCGAAATTGAGTACAAG
 
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rJMSF040J12+          CAGGGATTCAGGTCACCTGCTTCATAGGTCTGACCCTAATGATCATAGCTTGGATCTTGG
rJMSF013C01+          CAGGGATTCAGGTCACCTGCTTCATAGGTCTGACCCTAATGATCATAGCTTGGATCTTGG
                      ____________________________________________________________
consensus             CAGGGATTCAGGTCACCTGCTTCATAGGTCTGACCCTAATGATCATAGCTTGGATCTTGG
 
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rJMSF040J12+          AGGTTGGAGATCAGTAGATTCATCAAGTGATACTTCATCCATTTTCAGCTTCTCAGATAC
rJMSF013C01+          AGGTTGGAGATCAGTAGATTCATCAAGTGATACTTCATCCATTTTCAGCTTCTCAGATAC
                      ____________________________________________________________
consensus             AGGTTGGAGATCAGTAGATTCATCAAGTGATACTTCATCCATTTTCAGCTTCTCAGATAC
 
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rJMSF040J12+          TAGTTCTTATAGTACTGACAGCACCAAGGACTCGAGTGCTGAGGAGATTTCTGGATATAT
rJMSF013C01+          TAGTTCTTATAGTACTGACAGCACCAAGGACTCGAGTGCTGAGGAGATTTCTGGATATAT
                      ____________________________________________________________
consensus             TAGTTCTTATAGTACTGACAGCACCAAGGACTCGAGTGCTGAGGAGATTTCTGGATATAT
 
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rJMSF040J12+          ATTTGGATCAAGCTAAGGTGGTAGAGGTAATCTGACTTCTTGTTTAGCAACTATGGTGCC
rJMSF013C01+          ATTTGGATCAAGCTAAGGTGGTAGAGGTAATCTGACTTCTTGTTTAGCAACTATGGTGCC
                      ____________________________________________________________
consensus             ATTTGGATCAAGCTAAGGTGGTAGAGGTAATCTGACTTCTTGTTTAGCAACTATGGTGCC
 
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rJMSF040J12+          TGATCACAATATTAATGTGATGGATGCCTGGAAGGAACTTGACAGAGGTTATATAATATA
rJMSF013C01+          TGATCACAATATTAATGTGATGGATGCCTGGAAGGAACTTGACAGAGGTTATATAATATA
                      ____________________________________________________________
consensus             TGATCACAATATTAATGTGATGGATGCCTGGAAGGAACTTGACAGAGGTTATATAATATA
 
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rJMSF040J12+          TATACACTTAAAATAACACCTCTTGAAAGATCAGAAACGGCAAACATTACATTG      
rJMSF013C01+          TATACACTTAAAATAACACCTCTTGAAAGATCAGAAACGGCAAACATTACATTGTAGTGT
                      ____________________________________________________________
consensus             TATACACTTAAAATAACACCTCTTGAAAGATCAGAAACGGCAAACATTACATTGTAGTGT