| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010F22 | Sequence | 581 | 007805 (9) | ref|XP_010459324.1| | 5e-74 | PREDICTED: oligouridylate-binding protein 1B [Camelina sativa] | 726 | 009921 (6) | gb|KDP40672.1| | 3e-77 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
| JMFF010O10 | Sequence | 495 | 007805 (9) | ref|XP_010459324.1| | 4e-66 | PREDICTED: oligouridylate-binding protein 1B [Camelina sativa] | 779 | 009921 (6) | gb|KDP40672.1| | 6e-89 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
| JMFF015O17 | Sequence | 495 | 007805 (9) | ref|XP_010459324.1| | 4e-66 | PREDICTED: oligouridylate-binding protein 1B [Camelina sativa] | 657 | 009921 (6) | gb|KDP40672.1| | 6e-61 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
| JMSF012G22 | Sequence | 461 | 007805 (9) | ref|XP_006465882.1| | 7e-44 | PREDICTED: nucleolysin TIAR-like [Citrus sinensis] | 759 | 009921 (6) | gb|KDP40672.1| | 1e-80 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
| JMSF013P21 | Sequence | 301 | 007805 (9) | ref|XP_010459324.1| | 3e-15 | PREDICTED: oligouridylate-binding protein 1B [Camelina sativa] | 603 | 009921 (6) | gb|KDP40672.1| | 8e-50 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
| JMSF030N20 | Sequence | 624 | 007805 (9) | emb|CDO97825.1| | 4e-105 | unnamed protein product [Coffea canephora] | 646 | 009921 (6) | gb|KDP40672.1| | 3e-64 | hypothetical protein JCGZ_24671 [Jatropha curcas] |
This contig is upended
. : . : . : . : . : . :
rJMFF010O10+ CCAATGCCAAT
____________________________________________________________
consensus CCAATGCCAAT
. : . : . : . : . : . :
rJMFF010O10+ GATGACAAACAAAGTTNTGACTCAAAAAGTGTTGTGGAACTAACAAATGGTTCATCAGAA
rJMFF010F22+ CAAATGGTTCATCAGAA
rJMSF012G22+ TCAAAAAGTGGTGNGGAANTNACAAATGGTTCATCAGAA
____________________________________________________________
consensus GATGACAAACAAAGTTNTGACTCAAAAAGTGTTGTGGAACTAACAAATGGTTCATCAGAA
. : . : . : . : . : . :
rJMFF010O10+ GATGGTAAAGAGGCTGCAAATAGTGAAGCTCCTGAGAATAACCCACAATTCACCACTGTG
rJMFF010F22+ GATGGTAAAGAGGCTGCAAATAGTGAAGCTCCTGAGAATAACCCACAATTCACCACTGTG
rJMSF030N20+ CCACTGTG
rJMFF015O17+ CTGTG
rJMSF012G22+ GATGGTAAAGAGGCTGCAAATAGTGAAGCTCCTGAGAATAACCCACAATTCACCACTGTG
____________________________________________________________
consensus GATGGTAAAGAGGCTGCAAATAGTGAAGCTCCTGAGAATAACCCACAATTCACCACTGTG
. : . : . : . : . : . :
rJMFF010O10+ TATGTGGGCAATCTTGCTCCCGAGGTAACTCAGGTTGACCTTCATCGCCACTTCCATGCC
rJMFF010F22+ TATGTGGGCAATCTTGCTCCCGAGGTAACTCAGGTTGACCTTCATCGCCACTTCCATGCC
rJMSF030N20+ TATGTGGGCAATCTTGCTCCCGAGGTAACTCAGGTTGACCTTCATCGCCACTTCCATGCC
rJMFF015O17+ TATGTGGGCAATCTTGCTCCCGAGGTAACTCAGGTTGACCTTCATCGCCACTTCCATGCC
rJMSF013P21+ TTCCATGCC
rJMSF012G22+ TATGTGGGCAATCTTGCTCCCGAGGTAACTCAGGTTGACCTTCATCGCCACTTCCATGCC
____________________________________________________________
consensus TATGTGGGCAATCTTGCTCCCGAGGTAACTCAGGTTGACCTTCATCGCCACTTCCATGCC
. : . : . : . : . : . :
rJMFF010O10+ CTTGGTGCGGGAGTCATTGAGGAAGTTCGTGTACAGCGTGATAAAGGTTTCGGTTTCGTA
rJMFF010F22+ CTTGGTGCGGGAGTCATTGAGGAAGTTCGTGTACAGCGTGATAAAGGTTTCGGTTTCGTA
rJMSF030N20+ CTTGGTGCGGGAGTCATTGAGGAAGTTCGTGTACAGCGTGATAAAGGTTTCGGTTTCGTA
rJMFF015O17+ CTTGGTGCGGGAGTCATTGAGGAAGTTCGTGTACAGCGTGATAAAGGTTTCGGTTTCGTA
rJMSF013P21+ CTTGGTGCGGGAGTCATTGAGGAAGTTCGTGTACAGCGTGATAAAGGTTTCGGTTTCGTA
rJMSF012G22+ CTTGGTGCGGGAGTCATTGAGGAAGTTCGTGTACAGCGTGATAAAGGTTTCGGTTTCGTA
____________________________________________________________
consensus CTTGGTGCGGGAGTCATTGAGGAAGTTCGTGTACAGCGTGATAAAGGTTTCGGTTTCGTA
. : . : . : . : . : . :
rJMFF010O10+ AGATACAGCACCCATGCTGAGGCTGCTTTGGCTATTCAGATGGGAAACACACAGTCAATT
rJMFF010F22+ AGATACAGCACCCATGCTGAGGCTGCTTTGGCTATTCAGATGGGAAACACACAGTCAATT
rJMSF030N20+ AGATACAGCACCCATGCTGAGGCTGCTTTGGCTATTCAGATGGGAAACACACAGTCAATT
rJMFF015O17+ AGATACAGCACCCATGCTGAGGCTGCTTTGGCTATTCAGATGGGAAACACACAGTCAATT
rJMSF013P21+ AGATACAGCACCCATGCTGAGGCTGCTTTGGCTATTCAGATGGGAAACACACAGTCAATT
rJMSF012G22+ AGATACAGCACCCATGCTGAGGCTGCTTTGGCTATTCAGATGGGAAACACACAGTCAATT
____________________________________________________________
consensus AGATACAGCACCCATGCTGAGGCTGCTTTGGCTATTCAGATGGGAAACACACAGTCAATT
. : . : . : . : . : . :
rJMFF010O10+ CTTTGCGGAAAACAAATTAAGTGCTCATGGGGTAACAAGCCAACGCCACCCGGAACAGCT
rJMFF010F22+ CTTTGCGGAAAACAAATTAAGTGCTCATGGGGTAACAAGCCAACGCCACCCGGAACAGCT
rJMSF030N20+ CTTTGCGGAAAACAAATTAAGTGCTCATGGGGTAACAAGCCAACGCCACCCGGAACAGCT
rJMFF015O17+ CTTTGCGGAAAACAAATTAAGTGCTCATGGGGTAACAAGCCAACGCCACCCGGAACAGCT
rJMSF013P21+ CTTTGCGGAAAACAAATTAAGTGCTCATGGGGTAACAAGCCAACGCCACCCGGAACAGCT
rJMSF012G22+ CTTTGCGGAAAACAAATTAAGTGCTCATGGGGTAACAAGCCAACGCCACCCGGAACAGCT
____________________________________________________________
consensus CTTTGCGGAAAACAAATTAAGTGCTCATGGGGTAACAAGCCAACGCCACCCGGAACAGCT
. : . : . : . : . : . :
rJMFF010O10+ TCAAACCCTCTCCCACCACCAGCGCCAGCGCCCTTGCATGGCCTATCAGCCACTGATCTT
rJMFF010F22+ TCAAACCCTCTCCCACCACCAGCGCCAGCGCCCTTGCATGGCCTATCAGCCACTGATCTT
rJMSF030N20+ TCAAACCCTCTCCCACCACCAGCGCCAGCGCCCTTGCATGGCCTATCAGCCACTGATCTT
rJMFF015O17+ TCAAACCCTCTCCCACCACCAGCGCCAGCGCCCTTGCATGGCCTATCAGCCACTGATNTT
rJMSF013P21+ TCAAACCCTCTCCCACCACCAGCGCCAGCGCCCTTGCATGGCCTATCAGCCACTGATCTC
rJMSF012G22+ TCAAACCCTCTCCCACCACCAGCGCCAGCGCCCTTGCATGGCCTATCAGCCACTGATCTT
____________________________________________________________
consensus TCAAACCCTCTCCCACCACCAGCGCCAGCGCCCTTGCATGGCCTATCAGCCACTGATCTT
. : . : . : . : . : . :
rJMFF010O10+ CTGGCTTACGAGCGGCAGCTAGCAATGAGCAAGATGGGAGGGTTCAACGCCCTCATGCAC
rJMFF010F22+ CTGGCTTACGAGCGGCAGCTAGCAATGAGCAAGATGGGAGGGTTCAACGCCCTCATGCAC
rJMSF030N20+ CTGGCTTACGAGCGGCAGCTAGCAATGAGCAAGATGGGAGGGTTCAACGCCCTCATGCAC
rJMFF015O17+ NTGGCTTACGAGCGGCAGCTAGCAATGAGCAAGATGGGAGGGTTCAACGCCCTCATGCAC
rJMSF013P21+ CTGGCTTACGAGCGGCAGCTAGCAATGAGCAAGATGGGAGGGTTCAACGCCCTCATGCAC
rJMSF012G22+ CTGGCTTACGAGCGGCAGCTAGCAATGAGCAAGATGGGAGGGTTCAACGCCCTCATGCAC
____________________________________________________________
consensus CTGGCTTACGAGCGGCAGCTAGCAATGAGCAAGATGGGAGGGTTCAACGCCCTCATGCAC
. : . : . : . : . : . :
rJMFF010O10+ CCTCAGGGTCAGCACACTNTAAAGCAGGCGTCGATGGGTATGGGTGCTGCCGGAGCCAGC
rJMFF010F22+ CCTCAGGGTCAGCACACTNTAAAGCAGGCGTCGATGGGTATGGGTGCTGCCGGAGCCAGC
rJMSF030N20+ CCTCAGGGTCAGCACACTCTAAAGCAGGCGTCGATGGGTATGGGTGCTGCCGGAGCCAGC
rJMFF015O17+ CCTCAGGGTCAGCACACTNTAAAGCAGGCGTCGATGGGTATGGGTGCTGCCGGAGCCAGC
rJMSF013P21+ CCTCAGGGTCAGCACACTCTAAAGCAGGCGTCGATGGGTATGGGTGCTGCCGGAGCCAGC
rJMSF012G22+ CCTCAGGGTCAGCACACTCTAAAGCAGGCGTCGATGGGTATGGGTGCTGCCGGAGCCAGC
____________________________________________________________
consensus CCTCAGGGTCAGCACACTCTAAAGCAGGCGTCGATGGGTATGGGTGCTGCCGGAGCCAGC
. : . : . : . : . : . :
rJMFF010O10+ CAAGCCATTTACGACGGCGGTTTTCAGAGTGTGGCTGCTGCCCAGCAACTCATGTACTAT
rJMFF010F22+ CAAGCCATTTACGACGGCGGTTTTCAGAGTGTGGCTGCTGCCCAGCAACTCATGTACTAT
rJMSF030N20+ CAAGCCATTTACGACGGCGGTTTTCAGAGTGTGGCTGCTGCCCAGCAACTCATGTACTAT
rJMFF015O17+ CAAGCCATTTACGACGGCGGTTTTCAGAGTGTGGCTGCTGCCCAGCAACTCATGTACTAT
rJMSF013P21+ CAAGCCATTTACGACGGCGGTTTTCAGAGTGTGGCTGCTGCCCAGCAACTCATGTACTAT
rJMSF012G22+ CAAGCCATTTACGACGGCGGTTTTCAGAGTGTGGCTGCTGCCCAGCAACTCATGTACTAT
____________________________________________________________
consensus CAAGCCATTTACGACGGCGGTTTTCAGAGTGTGGCTGCTGCCCAGCAACTCATGTACTAT
. : . : . : . : . : . :
rJMFF010O10+ CAGTGATATTGCCATTCATCTGGCACTACCATTGCCTTTGTCTGTGTTACTCTTTTAGTT
rJMFF010F22+ CAGTGATATTGCCATTCATCTGGCACTACCATTGCCTTTGTCTGTGTTACTCTTTTAGTT
rJMSF030N20+ CAGTGATATTGCCATTCATCTGGCACTACCATTGCCTTTGTCTGTGTTACTCTTTTAGTT
rJMFF015O17+ CAGTGATATTGCCATTCATCTGGCACTACCATTGCCTTTGTCTGTGTTACTCTTTTAGTT
rJMSF013P21+ CAGTGATATTGCCATTCATCTGGCACTACCATTGCCTTTGTCTGTGTTACTCTTTTAGTT
rJMSF012G22+ CAGTGATATTGCCATTCATCTGGCACTACCATTGCCTTTGTCTGTGTTACTCTTTTAGTT
____________________________________________________________
consensus CAGTGATATTGCCATTCATCTGGCACTACCATTGCCTTTGTCTGTGTTACTCTTTTAGTT
. : . : . : . : . : . :
rJMFF010O10+ TTGTTTAATGTTACAGTATTTTTTTTTCCCAGCTTTTTTAAGAGGTGGTGCATATGTGTG
rJMFF010F22+ TTGTTTAATGTTACAGTATTTTTTTTTCCCAGCTTTTTTAAGAGGTGGTGCATATGTGTG
rJMSF030N20+ TTGTTTAATGTTACAGTATTTTTTTTTCCCAGCTTTTTTAAGAGGTGGTGCATATGTGTG
rJMFF015O17+ TTGTTTAATGTTACAGTATTTTTTTTTCCCAGCTTTTTTAAGAGGTGGTGCATATGTGTG
rJMSF013P21+ TTGTTTAATGTTACAGTATTTTTTTTTCCCAGCTTTTTTAAGAGGTGGTGCATATGTGTG
rJMSF012G22+ TTGTTTAATGTTACAGTATTTTTTTTTCCCAGCTTTTTTAAGAGGTGGTGCATATGTGTG
____________________________________________________________
consensus TTGTTTAATGTTACAGTATTTTTTTTTCCCAGCTTTTTTAAGAGGTGGTGCATATGTGTG
. : . : . : . : . : . :
rJMFF010O10+ CCACGTGTATCGTGTATCGGTGTATGTTCTATCTCTGCATT
rJMFF010F22+ CCACGTGTATCGTGTATCGGTGTATGTTCTATCTCTGCATTTGTAGGAA
rJMSF030N20+ CCACGTGTATCGTGTATCGGTGTATGTTCTATCTCTGC
rJMFF015O17+ CCACGTGTATCGTGTATCGGTGTATGTTCTATCTCTGCATTTGTAGGAA
rJMSF013P21+ CCACGTGTATCGTGTATCGGTGTATGTTCTATCTCTGCATTTGTAGGAA
rJMSF012G22+ CCACGTGTATCGTGTATCGGTGTATGTTCTATCTCTGCATTTGTAGGAATGAATGGTACT
____________________________________________________________
consensus CCACGTGTATCGTGTATCGGTGTATGTTCTATCTCTGCATTTGTAGGAATGAATGGTACT