Contig 009920:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012E18Sequence473009920 (2)ref|XP_011029885.1|9e-67PREDICTED: 2-methylene-furan-3-one reductase-like [Populus euphratica]662009920 (2)ref|XP_011029885.1|9e-69PREDICTED: 2-methylene-furan-3-one reductase-like [Populus euphratica]

Alignment

This contig is upended


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JMSF012E18-                                                       GGTGAAGATGAAGGGT
                      ____________________________________________________________
consensus                                                         GGTGAAGATGAAGGGT
 
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JMSF012E18-           TGGGCTTATACCCAAGAAGGGAAAGCTGTAAATGTCCTCCAATTCCATACAGATTTGCCA
                      ____________________________________________________________
consensus             TGGGCTTATACCCAAGAAGGGAAAGCTGTAAATGTCCTCCAATTCCATACAGATTTGCCA
 
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JMSF012E18-           GTTCCAACTCCTAAAGACGACCAGGTTCTGATCAAAGTCATCGCCGCCGCTCTCAACCCC
                      ____________________________________________________________
consensus             GTTCCAACTCCTAAAGACGACCAGGTTCTGATCAAAGTCATCGCCGCCGCTCTCAACCCC
 
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JMSF012E18-           GTAGACGCCAAACGCATGCTCGGCTTATTCCGGTCGCCTGAGCCCCCTTTTCTGATTGTT
                      ____________________________________________________________
consensus             GTAGACGCCAAACGCATGCTCGGCTTATTCCGGTCGCCTGAGCCCCCTTTTCTGATTGTT
 
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JMSF012E18-           CCGGGATACGATGCTGCCGGGGTAGTGGTGAAGGTGGGAAGTCAAGTAACAAAGTTTAAG
                      ____________________________________________________________
consensus             CCGGGATACGATGCTGCCGGGGTAGTGGTGAAGGTGGGAAGTCAAGTAACAAAGTTTAAG
 
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JMSF012E18-           GTGGGCGACCAAGTGTACGGAAACATAAACGAACATCCTGCGCATCCCAAACTGTTTGGT
                      ____________________________________________________________
consensus             GTGGGCGACCAAGTGTACGGAAACATAAACGAACATCCTGCGCATCCCAAACTGTTTGGT
 
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JMSF012E18-           TCCTTGGCGGAGTACACCGCCGTGGAAGAGAACCTCCTTGCTCTCAAACCCAATAATCTA
rJMSF012E18+                                                                    TA
                      ____________________________________________________________
consensus             TCCTTGGCGGAGTACACCGCCGTGGAAGAGAACCTCCTTGCTCTCAAACCCAATAATCTA
 
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JMSF012E18-           AGCTTCCCCGAAGCCGCTAGCCTTCCGCTTGCTATTGAGACTGCGTACGGCGGCCTTGAA
rJMSF012E18+          AGCTTCCCCGAAGCCGCTAGCCTTCCGCTTGCTATTGAGACTGCGTACGGCGGCCTTGAA
                      ____________________________________________________________
consensus             AGCTTCCCCGAAGCCGCTAGCCTTCCGCTTGCTATTGAGACTGCGTACGGCGGCCTTGAA
 
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JMSF012E18-           CAGGCCGGCTTTTCCGCCGGAAAATCCATTCTTGTTT                       
rJMSF012E18+          CAGGCCGGCTTTTCCGCCGGAAAATCCATTCTTGTTTTGGGCGGCGCCGGTGGGGTTGGA
                      ____________________________________________________________
consensus             CAGGCCGGCTTTTCCGCCGGAAAATCCATTCTTGTTTTGGGCGGCGCCGGTGGGGTTGGA
 
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rJMSF012E18+          ACTCTCGTCATTCAGGTGGCAAAGCACGTGTTTGGTGCATCTGAAATCGCTGCAACCTCC
                      ____________________________________________________________
consensus             ACTCTCGTCATTCAGGTGGCAAAGCACGTGTTTGGTGCATCTGAAATCGCTGCAACCTCC
 
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rJMSF012E18+          AGCGCTAAAAAATTCGAGTTGCTCAAAAGCCTTGGCGCCGATAAGGTGATTGATTACACA
                      ____________________________________________________________
consensus             AGCGCTAAAAAATTCGAGTTGCTCAAAAGCCTTGGCGCCGATAAGGTGATTGATTACACA
 
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rJMSF012E18+          AAGGAGAACGTGGAAGACTTGCCGCAAAAGTTCGATGTCGTCTATGATGCTGTCGGGCAG
                      ____________________________________________________________
consensus             AAGGAGAACGTGGAAGACTTGCCGCAAAAGTTCGATGTCGTCTATGATGCTGTCGGGCAG
 
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rJMSF012E18+          TGTGAAAGGGCTGTAAAAGCAGTGAAGGAAGGTGGAAAAGTAGTGGAGATAGTGGGAGGA
                      ____________________________________________________________
consensus             TGTGAAAGGGCTGTAAAAGCAGTGAAGGAAGGTGGAAAAGTAGTGGAGATAGTGGGAGGA
 
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rJMSF012E18+          CCCATTTCACCGCCGGCTTCATTTTACATAGTCATTTCAAATGGGTTAACTTTAGAGAAG
                      ____________________________________________________________
consensus             CCCATTTCACCGCCGGCTTCATTTTACATAGTCATTTCAAATGGGTTAACTTTAGAGAAG
 
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rJMSF012E18+          CTTAAACCGTTGATTGAGGAGGGGAAAGTGAAGCCAGTGATTGATCCCATTGGACCTTTC
                      ____________________________________________________________
consensus             CTTAAACCGTTGATTGAGGAGGGGAAAGTGAAGCCAGTGATTGATCCCATTGGACCTTTC
 
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rJMSF012E18+          CCCTTCTCTCAGGTTGTTGAAGCATTTGCGCATCTTGACACCGGCAGAGCCACCGGAAAA
                      ____________________________________________________________
consensus             CCCTTCTCTCAGGTTGTTGAAGCATTTGCGCATCTTGACACCGGCAGAGCCACCGGAAAA
 
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rJMSF012E18+          GTGGTTGTTCATCCGATTGCATGATTCTACCTACTCTCTCCAAGATCTATTATGAATCTT
                      ____________________________________________________________
consensus             GTGGTTGTTCATCCGATTGCATGATTCTACCTACTCTCTCCAAGATCTATTATGAATCTT
 
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rJMSF012E18+          GTTGCTAAATATATATGGTCATTATATTTAATAATACCATGATTTGCTATGGTGATCAGC
                      ____________________________________________________________
consensus             GTTGCTAAATATATATGGTCATTATATTTAATAATACCATGATTTGCTATGGTGATCAGC