Contig 009916:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF011A07-            GAGAACAACCACAATCCCTTACCTCTCTCTCTCTAACACTCACTCCGATCGCATAGATA
rJMSF011A07+            AGAACAACCACAATCCCTTACCTCTCTCTCTCTAACACTCACTCCGATCGCATAGATA
                      ____________________________________________________________
consensus              GAGAACAACCACAATCCCTTACCTCTCTCTCTCTAACACTCACTCCGATCGCATAGATA
 
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JMSF011A07-           CTCCCTTAGCTCTCTTTGTCTGTAACGCTATGTAAGATCGCTCCTAAACACTCCGATCTT
rJMSF011A07+          CTCCCTTAGCTCTCTTTGTCTGTAACGCTATGTAAGATCGCTCCTAAACACTCCGATCTT
                      ____________________________________________________________
consensus             CTCCCTTAGCTCTCTTTGTCTGTAACGCTATGTAAGATCGCTCCTAAACACTCCGATCTT
 
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JMSF011A07-           GTTCATGGCGCTTTAGTCTTTAGGTTTTCAACTCTATTTCTACCACAATTTCATTATGAC
rJMSF011A07+          GTTCATGGCGCTTTAGTCTTTAGGTTTTCAACTCTATTTCTACCACAATTTCATTATGAC
                      ____________________________________________________________
consensus             GTTCATGGCGCTTTAGTCTTTAGGTTTTCAACTCTATTTCTACCACAATTTCATTATGAC
 
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JMSF011A07-           CGAAGAAATTTGTTTCGTCTATACACCCACCTCATATACAATGTTCGAACTGACTCA   
rJMSF011A07+          CGAAGAAATTTGTTTCGTCTATACACCCACCTCATATACAATGTTCGAACTGACTCATTT
                      ____________________________________________________________
consensus             CGAAGAAATTTGTTTCGTCTATACACCCACCTCATATACAATGTTCGAACTGACTCATTT
 
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rJMSF011A07+          CTGTTAGATCTAGTGTTCAAGATTCAATTCTGGTGTTTTAGAGTAAGAGGTTGGAGATGA
                      ____________________________________________________________
consensus             CTGTTAGATCTAGTGTTCAAGATTCAATTCTGGTGTTTTAGAGTAAGAGGTTGGAGATGA
 
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rJMSF011A07+          GTCAGTGTACTATCTGTGGATTCTACCGGTTGTCGAGAAACCTAATATCAAGGTATTTTG
                      ____________________________________________________________
consensus             GTCAGTGTACTATCTGTGGATTCTACCGGTTGTCGAGAAACCTAATATCAAGGTATTTTG
 
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rJMSF011A07+          TGAACAATAAGAGTAAGATTACAGTCTAACAATGGCGTTTTGGCTGCAAACTTGTCTCAA
                      ____________________________________________________________
consensus             TGAACAATAAGAGTAAGATTACAGTCTAACAATGGCGTTTTGGCTGCAAACTTGTCTCAA
 
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rJMSF011A07+          CAGTGTACATATAACAAAATTTGCGAAAGGGGTTTAGAATTTGGTTTACTGCTAAAGGCT
                      ____________________________________________________________
consensus             CAGTGTACATATAACAAAATTTGCGAAAGGGGTTTAGAATTTGGTTTACTGCTAAAGGCT
 
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rJMSF011A07+          GATTTGGAACAATGGTGGGTGAAAAAAAGATTGAGACTGAGGTTTATATAGGCTCAAGAA
                      ____________________________________________________________
consensus             GATTTGGAACAATGGTGGGTGAAAAAAAGATTGAGACTGAGGTTTATATAGGCTCAAGAA
 
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rJMSF011A07+          GTGGAATTTGAAAGTTGAAGCTACCATTACTTGCAGCCGGAATAGAGATGGAAACCTTTG
                      ____________________________________________________________
consensus             GTGGAATTTGAAAGTTGAAGCTACCATTACTTGCAGCCGGAATAGAGATGGAAACCTTTG
 
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rJMSF011A07+          AGTTTCCAAGAAATAAATCATAATAATCATGCTGATTATTTGGAAGCATTTATTTTAAAT
                      ____________________________________________________________
consensus             AGTTTCCAAGAAATAAATCATAATAATCATGCTGATTATTTGGAAGCATTTATTTTAAAT
 
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rJMSF011A07+          ACATTTTTAAATCTGTATGTGTGTATCTGAAGGTCTTTACCGTGTATATATGAAATCGAT
                      ____________________________________________________________
consensus             ACATTTTTAAATCTGTATGTGTGTATCTGAAGGTCTTTACCGTGTATATATGAAATCGAT