Contig 009915:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF009E01+                                                               TTGCTTT
                      ____________________________________________________________
consensus                                                                  TTGCTTT
 
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rJMSF009E01+          TACACTTAGCCTGTAATAGTGAAAAAAACNCTNCCAAACACCGTAAGACATTCAAAACAA
                      ____________________________________________________________
consensus             TACACTTAGCCTGTAATAGTGAAAAAAACNCTNCCAAACACCGTAAGACATTCAAAACAA
 
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rJMSF009E01+          GTGTAAATCCATATTCTAACGAGAAAGCAAGGAAAACACGTATTAAATAGGCACGATTAA
                      ____________________________________________________________
consensus             GTGTAAATCCATATTCTAACGAGAAAGCAAGGAAAACACGTATTAAATAGGCACGATTAA
 
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rJMSF009E01+          ATAAATTTGTTACTGAGATGAATCAAAATAGCTATAAAAACATGCATAAATGTGATAACA
                      ____________________________________________________________
consensus             ATAAATTTGTTACTGAGATGAATCAAAATAGCTATAAAAACATGCATAAATGTGATAACA
 
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rJMSF009E01+          TCATCACTACTCTTTGAGCTTTGCAGTGAAGCTGAGTCACTTGGCTTGGATGATTTCCCA
rJMSF010M10+                                                          GATGANTTCCCA
                      ____________________________________________________________
consensus             TCATCACTACTCTTTGAGCTTTGCAGTGAAGCTGAGTCACTTGGCTTGGATGATTTCCCA
 
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rJMSF009E01+          ACAGCAGAGCGGCTGCAATGGCATGGTCATGCTCCAGGGGTGCC-GGATTGGTCAGAAGG
rJMSF010M10+          NCAGCAGAGCGGCTGCAATGGCA-NGTCATGCTCCAGGGGTGCCGGGATTGGTCAGAAGG
                      ____________________________________________________________
consensus             ACAGCAGAGCGGCTGCAATGGCATGGTCATGCTCCAGGGGTGCCGGGATTGGTCAGAAGG
 
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rJMSF009E01+          CAGTCGCTTTGTAGCATTTACACTGGTTGACAAAGTGAAGGGAGAAATATACATTGCCTT
rJMSF010M10+          CAGTCGCNTTGTAGCATTTACACTGGTTGACAAAGTGAAGGGAGAAATATACATTGCCTT
                      ____________________________________________________________
consensus             CAGTCGCTTTGTAGCATTTACACTGGTTGACAAAGTGAAGGGAGAAATATACATTGCCTT
 
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rJMSF009E01+          TAATGCGAGCCACCTGCCCGTGACAGTTACGCTGCCGGAACGAGGTGGTTATCGGTGGGA
rJMSF010M10+          TAATGCGAGCCACCTGCCCGTGACAGTTACGCTGCCGGAACGAGGTGGTTATCGGTGGGA
                      ____________________________________________________________
consensus             TAATGCGAGCCACCTGCCCGTGACAGTTACGCTGCCGGAACGAGGTGGTTATCGGTGGGA
 
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rJMSF009E01+          GCCGTTGGTGGACNCCGGCAAGCAAGCTCCATTTGATTTTCTTGGTGATGATGTTCCGGA
rJMSF010M10+          GCCGTTGGTGGACACCGGCAAGCAAGCTCCATTTGATTTTCTTGGTGATGATGTTCCGGA
                      ____________________________________________________________
consensus             GCCGTTGGTGGACACCGGCAAGCAAGCTCCATTTGATTTTCTTGGTGATGATGTTCCGGA
 
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rJMSF009E01+          GAAGAAAACAGCACTGAAACAGTATGCTCATTTTCTCGATGCCAACATGTACCCCATGCT
rJMSF010M10+          GAAGAAAACAGCACTGAAACAGTATGCTCATTTTCTCGATGCCAACATGTACCCCATGCT
                      ____________________________________________________________
consensus             GAAGAAAACAGCACTGAAACAGTATGCTCATTTTCTCGATGCCAACATGTACCCCATGCT
 
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rJMSF009E01+          TAGCTACTCTTCCATAATTCTGTTGCTATGCCCAGATGAAATGATAGATAACTCCTACGA
rJMSF010M10+          TAGCTACTCTTCCATAATTCTGTTGCTATGCCCAGATGAAATGATAGATAACTCCTA-GA
                      ____________________________________________________________
consensus             TAGCTACTCTTCCATAATTCTGTTGCTATGCCCAGATGAAATGATAGATAACTCCTACGA
 
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rJMSF009E01+          AGCCNGAGATGAGATATCATATTTGA                                  
rJMSF010M10+          AGCCAGAGATGAGATATCATATTTGACCTGGTATACACTATACGTTGATGTACCGGGTGT
                      ____________________________________________________________
consensus             AGCCAGAGATGAGATATCATATTTGACCTGGTATACACTATACGTTGATGTACCGGGTGT
 
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rJMSF010M10+          ATAAATAAATAGGCGTCCATAGTTATTGGACTTGCCATGAAAAGGAGTGTGTTTTATCAT
                      ____________________________________________________________
consensus             ATAAATAAATAGGCGTCCATAGTTATTGGACTTGCCATGAAAAGGAGTGTGTTTTATCAT
 
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rJMSF010M10+          ATTGCATTGTTGGCCCTTTTATTTTACATCAAACAGGCGTTAAATGGTTTTAGGGAAAAT
                      ____________________________________________________________
consensus             ATTGCATTGTTGGCCCTTTTATTTTACATCAAACAGGCGTTAAATGGTTTTAGGGAAAAT
 
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rJMSF010M10+          TGCATATACTCGTGGTACAAACGTGTGTGACCATCTTTAACCCTTAAGTTATGCACGAAG
                      ____________________________________________________________
consensus             TGCATATACTCGTGGTACAAACGTGTGTGACCATCTTTAACCCTTAAGTTATGCACGAAG
 
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rJMSF010M10+          TGACGATTTTAGTCTATCGAGAATTATTTCTACCACCAATTTGTCACTTAATAAAGTGGC
                      ____________________________________________________________
consensus             TGACGATTTTAGTCTATCGAGAATTATTTCTACCACCAATTTGTCACTTAATAAAGTGGC
 
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rJMSF010M10+          TGATTTGGCCTTTCAAGGTCTAAAATCGTCACTTTATGTATAACTTAGGGGTTACAGAAG
                      ____________________________________________________________
consensus             TGATTTGGCCTTTCAAGGTCTAAAATCGTCACTTTATGTATAACTTAGGGGTTACAGAAG
 
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rJMSF010M10+          GTTATGCATATAATTTAGGGACTAAATCTGTATTACGAGTATAACTAGAGGACAAAAATG
                      ____________________________________________________________
consensus             GTTATGCATATAATTTAGGGACTAAATCTGTATTACGAGTATAACTAGAGGACAAAAATG