Contig 009910:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF012H01+                                                                 CAGGA
                      ____________________________________________________________
consensus                                                                    CAGGA
 
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rJMSF012H01+          TAGTCCCATATCAAGATTAGAGGAGAGCTATGAGTGCTCCTCAAGTAAAGATTCTCACAT
                      ____________________________________________________________
consensus             TAGTCCCATATCAAGATTAGAGGAGAGCTATGAGTGCTCCTCAAGTAAAGATTCTCACAT
 
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rJMSF012H01+          GGCAATGCATAGTTTAGGAAGCACTGCTAATTTATTGCCTTGCTCAGAAAGCAAGAAAAG
                      ____________________________________________________________
consensus             GGCAATGCATAGTTTAGGAAGCACTGCTAATTTATTGCCTTGCTCAGAAAGCAAGAAAAG
 
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rJMSF012H01+          AGCACGAGACAGTCGGGGGTCTCAGCTCACACTAAAGTCATTCTTCCAGAAAGCTTCAAG
rJMSF010B20+                                            AAGTCATTNTTCCAGAAAGCTTCAAG
                      ____________________________________________________________
consensus             AGCACGAGACAGTCGGGGGTCTCAGCTCACACTAAAGTCATTCTTCCAGAAAGCTTCAAG
 
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rJMSF012H01+          TGAAAGTGAAACTTTAGATAACAATTGTGTGGTCAACAAGCATAATCAGAAGGATATGTC
rJMSF010B20+          TGAAAGTGAAACTTTAGATAACAATTGTGTGGTCAACAAGCATAATCAGAAGGATATGTC
                      ____________________________________________________________
consensus             TGAAAGTGAAACTTTAGATAACAATTGTGTGGTCAACAAGCATAATCAGAAGGATATGTC
 
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rJMSF012H01+          TAATTCCCTTTCAAATTTATATGGTGATAATGCTGCTGAAAATGGTAACCGTAACACAGA
rJMSF010B20+          TAATTCCCTTTCAAATTTATATGGTGATAATGCTGCTGAAAATGGTAACCGTAACACAGA
                      ____________________________________________________________
consensus             TAATTCCCTTTCAAATTTATATGGTGATAATGCTGCTGAAAATGGTAACCGTAACACAGA
 
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rJMSF012H01+          GAATGCATCTGCTCAGGAGGTAGGTATGCTAGATGCATGCAACTCTTCAGACAAAGAGAA
rJMSF010B20+          GAATGCATCTGCTCAGGAGGTAGGTATGCTAGATGCATGCAACTCTTCAGACAAAGAGAA
                      ____________________________________________________________
consensus             GAATGCATCTGCTCAGGAGGTAGGTATGCTAGATGCATGCAACTCTTCAGACAAAGAGAA
 
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rJMSF012H01+          GAGGGCTGATGCATTGCAGGAGTGGCAGAGGATTCAACAATTTATGCAGAATAGTGTACC
rJMSF010B20+          GAGGGCTGATGCATTGCAGGAGTGGCAGAGGATTCAACAATTTATGCAGAATAGTGTACC
                      ____________________________________________________________
consensus             GAGGGCTGATGCATTGCAGGAGTGGCAGAGGATTCAACAATTTATGCAGAATAGTGTACC
 
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rJMSF012H01+          ACTTTGTAGGGGCCATAAGGAGCCTTGCGTTTCTAGGCTTGTTAAGAAACCAGGCCCCAA
rJMSF010B20+          ACTTTGTAGGGGCCATAAGGAGCCTTGCGTTTCTAGGCTTGTTAAGAAACCAGGCCCCAA
                      ____________________________________________________________
consensus             ACTTTGTAGGGGCCATAAGGAGCCTTGCGTTTCTAGGCTTGTTAAGAAACCAGGCCCCAA
 
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rJMSF012H01+          TTTGGGACGCAGGTTTTATGTCTGCGCTCGTGCTGAGGGACCTGCATCTAACCCTGAAGC
rJMSF010B20+          TTTGGGACGCAGGTTTTATGTCTGCGCTCGTGCTGAGGGACCTGCATCTAACCCTGAAGC
                      ____________________________________________________________
consensus             TTTGGGACGCAGGTTTTATGTCTGCGCTCGTGCTGAGGGACCTGCATCTAACCCTGAAGC
 
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rJMSF012H01+          AAATTGTGGTTACTTTAAGTGGGCTGCTTCAAAACCCAAGGGCAAAAACTAGCAGTATTT
rJMSF010B20+          AAATTGTGGTTACTTTAAGTGGGCTGCTTCAAAACCCAAGGGCAAAAACTAGCAGTATTT
                      ____________________________________________________________
consensus             AAATTGTGGTTACTTTAAGTGGGCTGCTTCAAAACCCAAGGGCAAAAACTAGCAGTATTT
 
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rJMSF012H01+          GCTTCCATACGAGACAAACGACCATGAAAGGCATCTAAACGTAGTGCCTTCAAATTTCAG
rJMSF010B20+          GCTTCCATACGAGACAAACGACCATGAAAGGCATCTAAACGTAGTGCCTTCAAATTTCAG
                      ____________________________________________________________
consensus             GCTTCCATACGAGACAAACGACCATGAAAGGCATCTAAACGTAGTGCCTTCAAATTTCAG
 
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rJMSF010B20+          GTCAGTAAAATTAAGAAATCTTCTCTCTAGACTCTATAGCAACACCCCTCTTTGAGTTTT
                      ____________________________________________________________
consensus             GTCAGTAAAATTAAGAAATCTTCTCTCTAGACTCTATAGCAACACCCCTCTTTGAGTTTT
 
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rJMSF010B20+          ATTAATGTTTTTCTTCATGTATCTACCTTTTCTATAGCTAATTGCCATTTGCATTTTTTG
                      ____________________________________________________________
consensus             ATTAATGTTTTTCTTCATGTATCTACCTTTTCTATAGCTAATTGCCATTTGCATTTTTTG
 
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rJMSF010B20+          TAAATATTTTCTAACCCCATATATTAGCCTTAAGGCAAGTTTCTGTGATTGAATTCGTAT
                      ____________________________________________________________
consensus             TAAATATTTTCTAACCCCATATATTAGCCTTAAGGCAAGTTTCTGTGATTGAATTCGTAT
 
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rJMSF010B20+          TTTGTCAAAACGGGCTCATTTTAGAGAAATACCCTGAGCTTGATGTAAGGAAAAACCTTT
                      ____________________________________________________________
consensus             TTTGTCAAAACGGGCTCATTTTAGAGAAATACCCTGAGCTTGATGTAAGGAAAAACCTTT