clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF022F19 | Sequence | 419 | 002261 (7) | ref|XP_006349549.1| | 6e-32 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Solanum tuber | 712 | 009907 (8) | ref|XP_009767064.1| | 3e-91 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Nicotiana syl |
JMFS167D11 | Sequence | 628 | 009907 (8) | ref|XP_009767064.1| | 3e-75 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Nicotiana syl | |||||
JMSF009J14 | Sequence | 772 | 009907 (8) | ref|XP_009767064.1| | 8e-95 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Nicotiana syl | |||||
JMSF011M22 | Sequence | 278 | 002261 (7) | ref|XP_009618579.1| | 1e-16 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2 [Nicotiana tomentos | 737 | 009907 (8) | ref|XP_009767064.1| | 1e-95 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Nicotiana syl |
JMSF019P11 | Sequence | 503 | 002261 (7) | ref|XP_003535857.1| | 3e-66 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Glycine max] | 723 | 009907 (8) | ref|XP_009767064.1| | 8e-64 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Nicotiana syl |
JMSF033H05 | Sequence | 706 | 002261 (7) | ref|XP_006349549.1| | 1e-99 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Solanum tuber | 726 | 009907 (8) | ref|XP_009767064.1| | 1e-84 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Nicotiana syl |
JMSF047F16 | Sequence | 701 | 002261 (7) | emb|CDP10072.1| | 1e-113 | unnamed protein product [Coffea canephora] | 793 | 009907 (8) | ref|XP_009767064.1| | 2e-83 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Nicotiana syl |
JMSF047F17 | Sequence | 690 | 002440 (5) | ref|XP_006431178.1| | 1e-108 | hypothetical protein CICLE_v10011680mg [Citrus clementina] ref|XP_006431179.1| h | 719 | 009907 (8) | ref|XP_009767064.1| | 2e-69 | PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 2-like [Nicotiana syl |
This contig is upended
. : . : . : . : . : . :
rJMSF047F16+ TGCTCAAGAATATGCTGCATCTACAGGTTTACCAA
____________________________________________________________
consensus TGCTCAAGAATATGCTGCATCTACAGGTTTACCAA
. : . : . : . : . : . :
rJMSF047F17+ GTTACCGCAGTAAATCACATGC
rJMFF022F19+ CCGCAGTAAATCACATGC
rJMSF047F16+ TTCCAAGGAATGTTTTGATTCCTCGTACTAAGGGTTTTGTTACCGCAGTAAATCACATGC
rJMSF033H05+ CAGTAAATCACATGC
____________________________________________________________
consensus TTCCAAGGAATGTTTTGATTCCTCGTACTAAGGGTTTTGTTACCGCAGTAAATCACATGC
. : . : . : . : . : . :
rJMSF047F17+ GGTCATTTGTTCCTGCTATTTATGAGGTGACAGTTGCTATTCCTAAAAGTTCACCAGCCC
rJMFF022F19+ GGTCATTTGTTCCTGCTATTTATGAGGTGACAGTTGCTATTCCTAAAAGTTCACCAGCCC
rJMSF047F16+ GGTCATTTGTTCCTGCTATTTATGAGGTGACAGTTGCTATTCCTAAAAGTTCACCAGCCC
JMFS167D11- GCCC
rJMSF033H05+ GGTCA-TTGGTCCTGCTATTTATGAGGTGACAGTTGCTATTCCTAAAAGTTCACCAGCCC
____________________________________________________________
consensus GGTCATTTGTTCCTGCTATTTATGAGGTGACAGTTGCTATTCCTAAAAGTTCACCAGCCC
. : . : . : . : . : . :
rJMSF047F17+ CAACAATGCTGCGAATTTTCAAGGGTCAGCCTTCTGTGGTGCATATTCATATGAAGCGGC
rJMFF022F19+ CAACAATGCTACGAATTTTCAAGGGTCAGCCTTCTGTGGTGCATATTCATATGAAGCGGC
rJMSF011M22+ GGTGCATATTCATATGAAGCGGC
rJMSF047F16+ CAACAATGCTACGAATTTTCAAGGGTCAGCCTTCTGTGGTGCATATTCATATGAAGCGGC
JMFS167D11- CAACAATGCTACGAATTTTCAAGGGTCAGCCTTCTGTGGTGCATATTCATATGAAGCGGC
rJMSF019P11+ GGTGCATATTCATATGAAGCGGC
rJMSF033H05+ CAACAATGCTACGAATTTTCAAGGGTCAGCCTTCTGTGGTGCATATTCATATGAAGCGGC
rJMSF009J14+ GGTGCATATTCATATGAAGCGGC
____________________________________________________________
consensus CAACAATGCTACGAATTTTCAAGGGTCAGCCTTCTGTGGTGCATATTCATATGAAGCGGC
. : . : . : . : . : . :
rJMSF047F17+ ATATGATGAAGGATTTGCCAGAAAATGATGATGACATAGCTCAATGGTGTAGGGATGTCT
rJMFF022F19+ ATATGATGAAGGATTTGCCAGAAAATGATGATGACATAGCTCAATGGTGTAGGGATGTCT
rJMSF011M22+ ATATGATGAAGGATTTGCCAGAAAATGATGATGACATAGCTCAATGGTGTAGGGATGTCT
rJMSF047F16+ ATATGATGAAGGATTTGCCAGAAAATGATGATGACATAGCTCAATGGTGTAGGGATGTCT
JMFS167D11- ATATGATGAAGGATTTGCCAGAAAATGATGATGACATAGCTCAATGGTGTAGGGATGTCT
rJMSF019P11+ ATATGATGAAGGATTTGCCAGAAAATGATGATGACATAGCTCAATGGTGTAGGGATGTCT
rJMSF033H05+ ATATGATGAAGGATTTGCCAGAAAATGATGATGACATAGCTCAATGGTGTAGGGATGTCT
rJMSF009J14+ ATATGATGAAGGATTTGCCAGAAAATGATGATGACATAGCTCAATGGTGTAGGGATGTCT
____________________________________________________________
consensus ATATGATGAAGGATTTGCCAGAAAATGATGATGACATAGCTCAATGGTGTAGGGATGTCT
. : . : . : . : . : . :
rJMSF047F17+ TTGTTGCCAAGGACAAGTTATTAGACAAACATATTNCTGAAGACTCCTTTGGAG-AGAAA
rJMFF022F19+ TTGTTGCCAAGGACAAGTTATTAGACAAACATATTACTGAAGACTCCTTTGGAGAAGAAA
rJMSF011M22+ TTGTTGCCAAGGACAAGTTATTAGACAAACATATTACTGAAGACTCCTTTGGAGAAGAAA
rJMSF047F16+ TTGTTGCCAAGGACAAGTTATTAGACAAACATATTACTGAAGACTCCTTTGGAG-AGAAA
JMFS167D11- TTGTTGCCAAGGACAAGTTATTAGACAAACATATTACTGAAGACTCCTTTGGAGAAGAAA
rJMSF019P11+ TTGTTGCCAAGGACAAGTTATTAGACAAACATATTACTGAAGACTCCTTTGGAGAAGAAA
rJMSF033H05+ TTGTTGCCAAGGACAAGTTATTAGACAAACATATTACTGAAGACTCCTTTGGAGAAGAAA
rJMSF009J14+ TTGTTGCCAAGGACAAGTTATTAGACAAACATATTACTGAAGACTCCTTTGGAGAAGAAA
____________________________________________________________
consensus TTGTTGCCAAGGACAAGTTATTAGACAAACATATTACTGAAGACTCCTTTGGAGAAGAAA
. : . : . : . : . : . :
rJMSF047F17+ AGCTGCAAAACATTGGCCGGCCAGCGAAATCCCTTGTGGTTGTTGTATCTTGGGCATGTT
rJMFF022F19+ AGCTGCAAAACATTGGCCGGCCAGCGAAATCCCTTGTGGTTGTTGTATCTTGGGCATGTT
rJMSF011M22+ AGCTGCAAAACATTGGCCGGCCAGCGAAATCCCTTGTGGTTGTTGTATCTTGGGCATGTT
rJMSF047F16+ AGCTGCAAAACATTGGCCGGCCAGCGAAATCCCTTGTGGTTGTTGTATCTTGGGCATGTT
JMFS167D11- AGCTGCAAAACATTGGCCGGCCAGCGAAATCCCTTGTGGTTGTTGTATCTTGGGCATGTT
rJMSF019P11+ AGCTGCAAAACATTGGCCGGCCAGCAAAATCCCTTGTGGTTGTTGTATCTTGGGCATGTT
rJMSF033H05+ AGCTGCAAAACATTGGCCGGCCAGCGAAATCCCTTGTGGTTGTTGTATCTTGGGCATGTT
rJMSF009J14+ AGCTGCAAAACATTGGCCGGCCAGCGAAATCCCTTGTGGTTGTTGTATCTTGGGCATGTT
____________________________________________________________
consensus AGCTGCAAAACATTGGCCGGCCAGCGAAATCCCTTGTGGTTGTTGTATCTTGGGCATGTT
. : . : . : . : . : . :
rJMSF047F17+ TGCTAATTGTAGGGGCCATTAAACTCTTCCAATCTTCACCACTTTTATCTTCATGGAAGG
rJMFF022F19+ TGCTAATTGTAGGGGCCATTAAACTCTTCCAATCTTCACCACTTTTATCTTCATGGAAGG
rJMSF011M22+ TGCTAATTGTAGGGGCCATTAAACTCTTCCAATCTTCACCACTTTTATCTTCATGGAAGG
rJMSF047F16+ TGCTAATTGTAGGGGCCATTAAACTCTTCCAATCTTCACCACTTTTATCTTCATGGAAGG
JMFS167D11- TGCTAATTGTAGGGGCCATTAAACTCTTCCAATCTTCACCACTTTTATCTTCATGGAAGG
rJMSF019P11+ TGCTAATTGTAGGGGCCATTAAACTCTTCCAATCTTCACCACTTTTATCTTCATGGAAGG
rJMSF033H05+ TGCTAATTGTAGGGGCCATTAAACTCTTCCAATCTTCACCACTTTTATCTTCATGGAAGG
rJMSF009J14+ TGCTAATTGTAGGGGCCATTAAACTCTTCCAATCTTCACCACTTTTATCTTCATGGAAGG
____________________________________________________________
consensus TGCTAATTGTAGGGGCCATTAAACTCTTCCAATCTTCACCACTTTTATCTTCATGGAAGG
. : . : . : . : . : . :
rJMSF047F17+ GTATCACAGTTTCAGCCACACTGTTGGCTGTCATTACCATTCTTATGCAGATACTGATTA
rJMFF022F19+ GTATCACAGTTTCAGCCACACTGTTGGCTGTCATTACCATTCTTATGCAGATACTGATTA
rJMSF011M22+ GTATCACAGTTTCAGCCACACTGTTGGCTGTCATTACCATTCTTATGCAGATACTGATTA
rJMSF047F16+ GTATCACAGTTTCAGCCACACTGTTGGCTGTCATTACCATTCTTATGCAGATACTGATTA
JMFS167D11- GTATCACAGTTTCAGCCACACTGTTGGCTGTCATTACCATTCTTATGCAGATACTGATTA
rJMSF019P11+ GTATCACAGTTTCAGCCACACTGTTGGCTGTCATTACCATTCTTATGCAGATACTGATTA
rJMSF033H05+ GTATCACAGTTTCAGCCACACTGTTGGCTGTCATTACCATTCTTATGCAGATACTGATTA
rJMSF009J14+ GTATCACAGTTTCAGCCACACTGTTGGCTGTCATTACCATTCTTATGCAGATACTGATTA
____________________________________________________________
consensus GTATCACAGTTTCAGCCACACTGTTGGCTGTCATTACCATTCTTATGCAGATACTGATTA
. : . : . : . : . : . :
rJMSF047F17+ ATTTCACACAGTTGGAGCGCTCAACGCCTGCCAAGGTTGCACCAGCAAAGCGACAGAATG
rJMFF022F19+ ATTTCACACAGTTGGAGCGCTCAACGCCTGCCAAGGTTGCACCAGCAAAGCGACAGAATG
rJMSF011M22+ ATTTCACACAGTTGGAGCGCTCAACGCCTGCCAAGGTTGCACCAGCAAAGCGACAGAATG
rJMSF047F16+ ATTTCACACAGTTGGAGCGCTCAACGCCTGCCAAGGTTGCACCAGCAAAGCGACAGAATG
JMFS167D11- ATTTCACACAGTTGGAGCGCTCAACGCCTGCCAAGGTTGCACCAGCAAAGCGACAGAATG
rJMSF019P11+ ATTTCACACAGTTGGAGCGCTCAACGCCTGCCAAGGTTGCACCAGCAAAGCGACAGAATG
rJMSF033H05+ ATTTCACACAGTTGGAGCGCTCAACGCCTGCCAAGGTTGCACCAGCAAAGCGACAGAATG
rJMSF009J14+ ATTTCACACAGTTGGAGCGCTCAACGCCTGCCAAGGTTGCACCAGCAAAGCGACAGAATG
____________________________________________________________
consensus ATTTCACACAGTTGGAGCGCTCAACGCCTGCCAAGGTTGCACCAGCAAAGCGACAGAATG
. : . : . : . : . : . :
rJMSF047F17+ GGAAAAAAGTCGTGGAGAATGGGCAGCGAAAAGACGAGTGAATCACAATGGTTATCCCCT
rJMFF022F19+ GGAAAAAAGTCGTGGAGAATGGGCAGCGAAAAGACGAGTGAATCACAATGGTTATCCCCT
rJMSF011M22+ GGAAAAAAGTCGTGGAGAATGGGCAGCGAAAAGACGAGTGAATCACAATGGTTATCCCCT
rJMSF047F16+ GGAAAAAAGTCGTGGAGAATGGGCAGCGAAAAGACGAGTGAATCACAATGGTTATCCCCT
JMFS167D11- GGAAAAAAGTCGTGGAGAATGGGCAGCGAAAAGACGAGTGAATCACAATGGTTATCCCCT
rJMSF019P11+ GGAAAAAAGTCGTGGAGAATGGGCAGCGAAAAGACGAGTGAATCACAATGGTTATCCCCT
rJMSF033H05+ GGAAAAAAGTCGTGGAGAATGGGCAGCGAAAAGACGAGTGAATCACAATGGTTATCCCCT
rJMSF009J14+ GGAAAAAAGTCGTGGAGAATGGGCAGCGAAAAGACGAGTGAATCACAATGGTTATCCCCT
____________________________________________________________
consensus GGAAAAAAGTCGTGGAGAATGGGCAGCGAAAAGACGAGTGAATCACAATGGTTATCCCCT
. : . : . : . : . : . :
rJMSF047F17+ CCCAGATAGCAATGGTCCCTTCTTCATCACCTATAGATGCTCATTTTCTGAAGTAGAAGA
rJMFF022F19+ CCCAGATAGCAATGGTCCCTTCTTCATCACCTATAGATGCTCATTTTCTGAAGTAGAAGA
rJMSF011M22+ CCCAGATAGCAATGGTCCCTTCTTCATCACCTATAGATGCTCATTTTCTGAAGTAGAAGA
rJMSF047F16+ CCCAGATAGCAATGGTCCCTTCTTCATCACCTATAGATGCTCATTTTCTGAAGTAGAAGA
JMFS167D11- CCCAGATAGCAATGGTCCCTTCTTCATCACCTATAGATGCTCATTTTCTGAAGTAGAAGA
rJMSF019P11+ CCCAGATAGCAATGGTCCCTTCTTCATCACCTATAGATGCTCATTTTCTGAAGTAGAAGA
rJMSF033H05+ CCCAGATAGCAATGGTCCCTTCTTCATCACCTATAGATGCTCATTTTCTGAAGTAGAAGA
rJMSF009J14+ CCCAGATAGCAATGGTCCCTTCTTCATCACCTATAGATGCTCATTTTCTGAAGTAGAAGA
____________________________________________________________
consensus CCCAGATAGCAATGGTCCCTTCTTCATCACCTATAGATGCTCATTTTCTGAAGTAGAAGA
. : . : . : . : . : . :
rJMSF047F17+ TGAGCTTATGTATTATGTAGTGAA-CATGATTATATGCTCAAATTTTTGTATGAGATTTA
rJMFF022F19+ TGAGCTTATGTATTATGTAGTGAA-CATGATTATATGCTCAAATTTTTGTATGAGATTTA
rJMSF011M22+ TGAGCTTATGTATTATGTAGTGAACCATGATTATATGCTCAAATTTTTGTATGAGATTTA
rJMSF047F16+ TGAGCTTATGTATTATGTAGTGAA-CATGATTATATGCTCAAATTTTTGTATGAGATTTA
JMFS167D11- TGAGCTTATGTATTATGTAGTGAA-CATGATTATATGCTCAAATTTTTGTATGAGATTTA
rJMSF019P11+ TGAGCTTATGTATTATGTAGTGAACCATGATTATATGCTCAAATTTTTGTATGAGATTTA
rJMSF033H05+ TGAGCTTATGTATTATGTAGTGAA-CATGATTATATGCTCAAATTTTTGTATGAGATTTA
rJMSF009J14+ TGAGCTTATGTATTATGTAGTGAA-CATGATTATATGCTCAAATTTTTGTATGAGATTTA
____________________________________________________________
consensus TGAGCTTATGTATTATGTAGTGAA-CATGATTATATGCTCAAATTTTTGTATGAGATTTA
. : . : . : . : . : . :
rJMSF047F17+ TGCTA-CTTAGTCTTTTATATCTCACAGAAAAC
rJMFF022F19+ TGCTA-CTTAGTCTTTTATATCTCACAGAAAAC
rJMSF011M22+ TGCTACCTTAGTCTTTTATATCTCACAGAAAAC
rJMSF047F16+ TGCTA-CTTAGTCTTTTATATCTCACAGAAAAC
JMFS167D11- TGCTA-CTTAGTCTTTTATATCTCAC
rJMSF019P11+ TGCTA-CTTAGTCTTT
rJMSF033H05+ TGCTA-CTTAGTCTTTTATATCTCACAGAAAACCAATGATATGATCAACCTCAC
rJMSF009J14+ TGCTA-CTTAGTCTTTTATATCTCACAGAAAA-CAATGATATGATCAACCTCACCTGAAT
____________________________________________________________
consensus TGCTA-CTTAGTCTTTTATATCTCACAGAAAACCAATGATATGATCAACCTCACCTGAAT